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Search of human proteins with 209180455
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209180455 zinc finger, matrin type 4 isoform b [Homo
sapiens]
(153 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209180455 zinc finger, matrin type 4 isoform b [Homo sapiens] 317 2e-87
gi|13375887 zinc finger, matrin type 4 isoform a [Homo sapiens] 243 6e-65
gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens] 130 3e-31
gi|6912440 zinc finger protein 346 [Homo sapiens] 115 1e-26
gi|11968019 p53 target zinc finger protein isoform 1 [Homo sapiens] 69 1e-12
gi|23199978 p53 target zinc finger protein isoform 2 [Homo sapiens] 69 1e-12
gi|13375981 zinc finger protein 385D [Homo sapiens] 51 3e-07
gi|164663780 zinc finger protein 385B isoform 3 [Homo sapiens] 48 3e-06
gi|164663778 zinc finger protein 385B isoform 2 [Homo sapiens] 48 3e-06
gi|63029928 zinc finger protein 385B isoform 1 [Homo sapiens] 48 3e-06
gi|34101286 zinc finger RNA binding protein [Homo sapiens] 47 6e-06
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 46 1e-05
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 43 9e-05
gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 43 1e-04
gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 43 1e-04
gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 43 1e-04
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 40 0.001
gi|15529978 zinc finger protein 622 [Homo sapiens] 39 0.001
gi|195972903 zinc finger protein 385A isoform a [Homo sapiens] 38 0.003
gi|24308079 zinc finger protein 385A isoform c [Homo sapiens] 38 0.003
gi|195972905 zinc finger protein 385A isoform b [Homo sapiens] 38 0.004
gi|58533172 zinc finger, matrin type 1 isoform 3 [Homo sapiens] 37 0.007
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 37 0.009
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens] 37 0.009
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens] 37 0.009
gi|114431236 zinc finger protein 462 [Homo sapiens] 37 0.009
gi|223890230 zinc finger protein, multitype 2 [Homo sapiens] 37 0.009
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 36 0.011
gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens] 35 0.025
gi|41349474 PR domain containing 4 [Homo sapiens] 35 0.025
>gi|209180455 zinc finger, matrin type 4 isoform b [Homo sapiens]
Length = 153
Score = 317 bits (813), Expect = 2e-87
Identities = 153/153 (100%), Positives = 153/153 (100%)
Query: 1 MKSSDIDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRL 60
MKSSDIDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRL
Sbjct: 1 MKSSDIDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRL 60
Query: 61 RSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRR 120
RSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRR
Sbjct: 61 RSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRR 120
Query: 121 NYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
NYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK
Sbjct: 121 NYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
>gi|13375887 zinc finger, matrin type 4 isoform a [Homo sapiens]
Length = 229
Score = 243 bits (619), Expect = 6e-65
Identities = 126/172 (73%), Positives = 131/172 (76%), Gaps = 23/172 (13%)
Query: 1 MKSSDIDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRL 60
MKSSDIDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRL
Sbjct: 1 MKSSDIDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRL 60
Query: 61 RSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGL-- 118
RSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTT
Sbjct: 61 RSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPL 120
Query: 119 -------------------RR--NYRCTICSVSLNSIEQYHAHLKGSKHQTN 149
RR + C +C+ N+ H G KH+ N
Sbjct: 121 SPLKPPRMDTAPVVASPYQRRDSDRYCGLCAAWFNNPLMAQQHYDGKKHKKN 172
Score = 108 bits (270), Expect = 2e-24
Identities = 66/153 (43%), Positives = 84/153 (54%), Gaps = 15/153 (9%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYY--MLHPRDGGCPAKRLRSENGSDADMV-- 71
C +C+ S +HY+ + HA +++L + P L+ A +V
Sbjct: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLSPLKPPRMDTAPVVAS 136
Query: 72 -----DKNKCCTLCNMSFTSAVVADSHYQGKIHAK---RLKLLLGEKTPL---KTTGLRR 120
D ++ C LC F + ++A HY GK H K R+ LL T L + GLRR
Sbjct: 137 PYQRRDSDRYCGLCAAWFNNPLMAQQHYDGKKHKKNAARVALLEQLGTTLDMGELRGLRR 196
Query: 121 NYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
NYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK
Sbjct: 197 NYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 229
Score = 38.5 bits (88), Expect = 0.002
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
Query: 12 TDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMV 71
+D YC +C+A + HY+ +KH +L LR +
Sbjct: 143 SDRYCGLCAAWFNNPLMAQQHYDGKKHKKNAARVALLEQLGTTLDMGELRG--------L 194
Query: 72 DKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLK 104
+N CT+C++S S +H +G H LK
Sbjct: 195 RRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLK 227
Score = 33.1 bits (74), Expect = 0.095
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLL--------------LGEKTPLKTTGLRRNY 122
C +C+ S +HY+ + HA +++L L + + +N
Sbjct: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKNK 75
Query: 123 RCTICSVSLNSIEQYHAHLKGSKHQTNLK 151
CT+C++S S +H +G H LK
Sbjct: 76 CCTLCNMSFTSAVVADSHYQGKIHAKRLK 104
>gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]
Length = 638
Score = 130 bits (328), Expect = 3e-31
Identities = 63/150 (42%), Positives = 91/150 (60%), Gaps = 11/150 (7%)
Query: 9 DLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRS--ENGS 66
+LFTD +C+VC L ESQR++HYE KHA V Y+ +H P K+++ EN
Sbjct: 51 ELFTDKFCQVCGVMLQFESQRISHYEGEKHAQNVSFYFQMHGEQNEVPGKKMKMHVENFQ 110
Query: 67 --DADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLR----- 119
+ VDKNK C LCNM F+S ++A SHY GK+HAK+LK L+ E +G +
Sbjct: 111 VHRYEGVDKNKFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQLMEEHDQASPSGFQPEMAF 170
Query: 120 --RNYRCTICSVSLNSIEQYHAHLKGSKHQ 147
R Y C ICS++ S++ + +H++GS+HQ
Sbjct: 171 SMRTYVCHICSIAFTSLDMFRSHMQGSEHQ 200
>gi|6912440 zinc finger protein 346 [Homo sapiens]
Length = 294
Score = 115 bits (289), Expect = 1e-26
Identities = 67/156 (42%), Positives = 91/156 (58%), Gaps = 15/156 (9%)
Query: 7 DQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDG-GCPAKRLRSENG 65
+Q LFT++ CKVC A LISESQ++AHY+S+KHA+KV+ Y +H + K+L S+
Sbjct: 66 NQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQK 125
Query: 66 SDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYR-- 123
S DKN+CC +CNM+F+S VVA SHY GK HAK LKL ++ K L +N
Sbjct: 126 SSRSK-DKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKL---KQQSTKVEALHQNREMI 181
Query: 124 -----CTICSVSLNSIEQYHAHLKGSKH---QTNLK 151
C++C + N H G KH +T LK
Sbjct: 182 DPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLK 217
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 20/104 (19%)
Query: 70 MVDKNKC------CTLCNMSFTSAVVADSHYQGKIHAKRLKLLL---------GEKTPL- 113
M+ KN+C C +C S +HYQ K HA ++K L GE L
Sbjct: 62 MIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLD 121
Query: 114 ----KTTGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
+ +N C IC+++ +S +H G H NLK K
Sbjct: 122 SDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLK 165
>gi|11968019 p53 target zinc finger protein isoform 1 [Homo sapiens]
Length = 289
Score = 69.3 bits (168), Expect = 1e-12
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 24/118 (20%)
Query: 8 QDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRS----- 62
++L YCK+C+ L S Q AHY+ + H K+R YY + CP S
Sbjct: 64 EELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAAN----SCPPPARMSNVVEP 119
Query: 63 ---------------ENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKL 105
+ G + +N C LC+ SF+S VA +HYQGK HAKRL+L
Sbjct: 120 AATPVVPVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRL 177
Score = 34.7 bits (78), Expect = 0.033
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 124 CTICSVSLNSIEQYHAHLKGSKHQTNLKN 152
C +C+V+LNS +Q AH +G H L+N
Sbjct: 72 CKLCNVTLNSAQQAQAHYQGKNHGKKLRN 100
Score = 26.9 bits (58), Expect = 6.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKV 42
YC +C+ E + H ES++H SKV
Sbjct: 247 YCSMCNVGAGEEMEFRQHLESKQHKSKV 274
>gi|23199978 p53 target zinc finger protein isoform 2 [Homo sapiens]
Length = 288
Score = 69.3 bits (168), Expect = 1e-12
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 24/118 (20%)
Query: 8 QDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRS----- 62
++L YCK+C+ L S Q AHY+ + H K+R YY + CP S
Sbjct: 64 EELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAAN----SCPPPARMSNVVEP 119
Query: 63 ---------------ENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKL 105
+ G + +N C LC+ SF+S VA +HYQGK HAKRL+L
Sbjct: 120 AATPVVPVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRL 177
Score = 34.7 bits (78), Expect = 0.033
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 124 CTICSVSLNSIEQYHAHLKGSKHQTNLKN 152
C +C+V+LNS +Q AH +G H L+N
Sbjct: 72 CKLCNVTLNSAQQAQAHYQGKNHGKKLRN 100
Score = 26.9 bits (58), Expect = 6.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKV 42
YC +C+ E + H ES++H SKV
Sbjct: 246 YCSMCNVGAGEEMEFRQHLESKQHKSKV 273
>gi|13375981 zinc finger protein 385D [Homo sapiens]
Length = 395
Score = 51.2 bits (121), Expect = 3e-07
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 28/158 (17%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSEN---------GS 66
C +C + S+SQ AHY+ KHA K++ + + AK +
Sbjct: 82 CNICQLRFNSDSQAAAHYKGTKHAKKLKALEAMKNKQKSVTAKDSAKTTFTSITTNTINT 141
Query: 67 DADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTG--------- 117
+D D + + T + S +I +K EK+P TG
Sbjct: 142 SSDKTDGTAGTPAISTTTTVEIRKSSVMTTEITSKV------EKSPTTATGNSSCPSTET 195
Query: 118 ----LRRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLK 151
+R C++C V++NS Q AH G+KH+T L+
Sbjct: 196 EEEKAKRLLYCSLCKVAVNSASQLEAHNSGTKHKTMLE 233
Score = 37.7 bits (86), Expect = 0.004
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 16/93 (17%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKT-------------PLK--TTGLR-R 120
C+LC ++ SA ++H G H L+ G T P+ TGL+ +
Sbjct: 206 CSLCKVAVNSASQLEAHNSGTKHKTMLEARNGSGTIKAFPRAGVKGKGPVNKGNTGLQNK 265
Query: 121 NYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
+ C IC V +NS Q H+ +H+ K
Sbjct: 266 TFHCEICDVHVNSETQLKQHISSRRHKDRAAGK 298
Score = 32.0 bits (71), Expect = 0.21
Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 14/96 (14%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSE--------NGS 66
YC +C + S SQ AH KH + ML R+G K N
Sbjct: 205 YCSLCKVAVNSASQLEAHNSGTKHKT------MLEARNGSGTIKAFPRAGVKGKGPVNKG 258
Query: 67 DADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKR 102
+ + +K C +C++ S H + H R
Sbjct: 259 NTGLQNKTFHCEICDVHVNSETQLKQHISSRRHKDR 294
>gi|164663780 zinc finger protein 385B isoform 3 [Homo sapiens]
Length = 369
Score = 48.1 bits (113), Expect = 3e-06
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGS------DAD 69
C VC + S+SQ AHY+ KHA KV+ + P+K N S +
Sbjct: 57 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGN 116
Query: 70 MVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKT-PLKTTG----------- 117
DK++ S +S + + + L G T P K+T
Sbjct: 117 NSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVESEE 176
Query: 118 --LRRNYRCTICSVSLNSIEQYHAHLKGSKHQT 148
++ C++C V++NS+ Q AH GSKH+T
Sbjct: 177 EKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKT 209
Score = 40.8 bits (94), Expect = 5e-04
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAK-------RLRSENGS- 66
YC +C + S SQ AH KH + M+ R+G P K RL+ +NGS
Sbjct: 184 YCSLCKVAVNSLSQLEAHNTGSKHKT------MVEARNGAGPIKSYPRPGSRLKMQNGSK 237
Query: 67 DADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRL 103
+ + +K C +C++ S + H + H R+
Sbjct: 238 GSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV 274
Score = 36.6 bits (83), Expect = 0.009
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 31/131 (23%)
Query: 50 PRDGGCPAKRLRSENGSDADMVDKNK-------CCTLCNMSFTSAVVADSHYQGKIH--- 99
P G +S NG+ +V+ + C+LC ++ S ++H G H
Sbjct: 151 PLPPGAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTM 210
Query: 100 ----------------AKRLKLLLGEKTPLKTTGLR-RNYRCTICSVSLNSIEQYHAHLK 142
RLK+ G K +GL+ + + C IC V +NS Q H+
Sbjct: 211 VEARNGAGPIKSYPRPGSRLKMQNGSKG----SGLQNKTFHCEICDVHVNSEIQLKQHIS 266
Query: 143 GSKHQTNLKNK 153
+H+ + K
Sbjct: 267 SRRHKDRVAGK 277
Score = 33.1 bits (74), Expect = 0.095
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 124 CTICSVSLNSIEQYHAHLKGSKHQTNLK 151
C +C + NS Q AH KGSKH +K
Sbjct: 57 CNVCQLRFNSDSQAEAHYKGSKHAKKVK 84
>gi|164663778 zinc finger protein 385B isoform 2 [Homo sapiens]
Length = 395
Score = 48.1 bits (113), Expect = 3e-06
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGS------DAD 69
C VC + S+SQ AHY+ KHA KV+ + P+K N S +
Sbjct: 83 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGN 142
Query: 70 MVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKT-PLKTTG----------- 117
DK++ S +S + + + L G T P K+T
Sbjct: 143 NSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVESEE 202
Query: 118 --LRRNYRCTICSVSLNSIEQYHAHLKGSKHQT 148
++ C++C V++NS+ Q AH GSKH+T
Sbjct: 203 EKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKT 235
Score = 40.8 bits (94), Expect = 5e-04
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAK-------RLRSENGS- 66
YC +C + S SQ AH KH + M+ R+G P K RL+ +NGS
Sbjct: 210 YCSLCKVAVNSLSQLEAHNTGSKHKT------MVEARNGAGPIKSYPRPGSRLKMQNGSK 263
Query: 67 DADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRL 103
+ + +K C +C++ S + H + H R+
Sbjct: 264 GSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV 300
Score = 36.6 bits (83), Expect = 0.009
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 31/131 (23%)
Query: 50 PRDGGCPAKRLRSENGSDADMVDKNK-------CCTLCNMSFTSAVVADSHYQGKIH--- 99
P G +S NG+ +V+ + C+LC ++ S ++H G H
Sbjct: 177 PLPPGAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTM 236
Query: 100 ----------------AKRLKLLLGEKTPLKTTGLR-RNYRCTICSVSLNSIEQYHAHLK 142
RLK+ G K +GL+ + + C IC V +NS Q H+
Sbjct: 237 VEARNGAGPIKSYPRPGSRLKMQNGSKG----SGLQNKTFHCEICDVHVNSEIQLKQHIS 292
Query: 143 GSKHQTNLKNK 153
+H+ + K
Sbjct: 293 SRRHKDRVAGK 303
Score = 33.1 bits (74), Expect = 0.095
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 124 CTICSVSLNSIEQYHAHLKGSKHQTNLK 151
C +C + NS Q AH KGSKH +K
Sbjct: 83 CNVCQLRFNSDSQAEAHYKGSKHAKKVK 110
>gi|63029928 zinc finger protein 385B isoform 1 [Homo sapiens]
Length = 471
Score = 48.1 bits (113), Expect = 3e-06
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGS------DAD 69
C VC + S+SQ AHY+ KHA KV+ + P+K N S +
Sbjct: 159 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGN 218
Query: 70 MVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKT-PLKTTG----------- 117
DK++ S +S + + + L G T P K+T
Sbjct: 219 NSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVESEE 278
Query: 118 --LRRNYRCTICSVSLNSIEQYHAHLKGSKHQT 148
++ C++C V++NS+ Q AH GSKH+T
Sbjct: 279 EKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKT 311
Score = 40.8 bits (94), Expect = 5e-04
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAK-------RLRSENGS- 66
YC +C + S SQ AH KH + M+ R+G P K RL+ +NGS
Sbjct: 286 YCSLCKVAVNSLSQLEAHNTGSKHKT------MVEARNGAGPIKSYPRPGSRLKMQNGSK 339
Query: 67 DADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRL 103
+ + +K C +C++ S + H + H R+
Sbjct: 340 GSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV 376
Score = 39.7 bits (91), Expect = 0.001
Identities = 40/159 (25%), Positives = 58/159 (36%), Gaps = 27/159 (16%)
Query: 14 SYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDK 73
S+C+VC+ QL S +Q H + H +V+ L PA+ S N S
Sbjct: 34 SFCEVCNIQLNSAAQAQVHSNGKSHRKRVK---QLSDGQPPPPAQASPSSNSSTGSTCHT 90
Query: 74 NKCCTLCN---------------MSF----TSAVVADSHYQ--GKIHAKRLKLLLGEKTP 112
L MSF +SAV ++ + + G P
Sbjct: 91 TTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHTFGVSIP 150
Query: 113 LKTTGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLK 151
K ++ C +C + NS Q AH KGSKH +K
Sbjct: 151 PKK---KQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVK 186
Score = 36.6 bits (83), Expect = 0.009
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 31/131 (23%)
Query: 50 PRDGGCPAKRLRSENGSDADMVDKNK-------CCTLCNMSFTSAVVADSHYQGKIH--- 99
P G +S NG+ +V+ + C+LC ++ S ++H G H
Sbjct: 253 PLPPGAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTM 312
Query: 100 ----------------AKRLKLLLGEKTPLKTTGLR-RNYRCTICSVSLNSIEQYHAHLK 142
RLK+ G K +GL+ + + C IC V +NS Q H+
Sbjct: 313 VEARNGAGPIKSYPRPGSRLKMQNGSKG----SGLQNKTFHCEICDVHVNSEIQLKQHIS 368
Query: 143 GSKHQTNLKNK 153
+H+ + K
Sbjct: 369 SRRHKDRVAGK 379
Score = 35.0 bits (79), Expect = 0.025
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 54 GCPAKRLRSENGSDADMVDKNKC----CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGE 109
G K ++++ D +K K C +CN+ SA A H GK H KR+K L
Sbjct: 9 GFEEKGIKNDRPEDQLSKEKKKILFSFCEVCNIQLNSAAQAQVHSNGKSHRKRVKQLSDG 68
Query: 110 KTP 112
+ P
Sbjct: 69 QPP 71
>gi|34101286 zinc finger RNA binding protein [Homo sapiens]
Length = 1074
Score = 47.0 bits (110), Expect = 6e-06
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLK----TTGLRRNYRCTICSVSLN 132
C +C +S H +G+ H K+ L + T G + RC +C VS
Sbjct: 333 CDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQNTSSSNSSTRGTQNQLRCELCDVSCT 392
Query: 133 SIEQYHAHLKGSKHQTNLK 151
+ Y AH++G+KHQ +K
Sbjct: 393 GADAYAAHIRGAKHQKVVK 411
Score = 37.7 bits (86), Expect = 0.004
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 10/102 (9%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKN 74
YC VC H E +KH K + A + S + S
Sbjct: 332 YCDVCKISCAGPQTYKEHLEGQKHKKK----------EAALKASQNTSSSNSSTRGTQNQ 381
Query: 75 KCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTT 116
C LC++S T A +H +G H K +KL P+ +T
Sbjct: 382 LRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPST 423
Score = 29.6 bits (65), Expect = 1.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 122 YRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
+ C +C S N HLKG +H+ K K
Sbjct: 582 FHCKLCECSFNDPNAKEMHLKGRRHRLQYKKK 613
Score = 28.9 bits (63), Expect = 1.8
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 86 SAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYRCTICSVSLNSIEQYHAHLKGSK 145
+A A + + G K+ + P + + + C +C +S + Y HL+G K
Sbjct: 295 AAAAATAAWTGTTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQK 354
Query: 146 HQ 147
H+
Sbjct: 355 HK 356
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 45.8 bits (107), Expect = 1e-05
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKT---PLKTTGLRRN--YRCTICSVSL 131
CT+C SFT + HY H +LK +L E + P +T N Y+C+IC+V+
Sbjct: 1498 CTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPQETNSNTDNKPYKCSICNVAY 1557
Query: 132 NSIEQYHAHLKGSKHQTNLK 151
+ H++ HQT +
Sbjct: 1558 SQSSTLEIHMRSVLHQTKAR 1577
Score = 32.7 bits (73), Expect = 0.12
Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKNK 75
C VC ++ + HY S H K++ +L P E S+ D +K
Sbjct: 1498 CTVCKESFTQKNILLVHYNSVSHLHKLK--KVLQEASSPVP-----QETNSNTD--NKPY 1548
Query: 76 CCTLCNMSFTSAVVADSHYQGKIHAKRLK 104
C++CN++++ + + H + +H + +
Sbjct: 1549 KCSICNVAYSQSSTLEIHMRSVLHQTKAR 1577
Score = 31.6 bits (70), Expect = 0.28
Identities = 21/95 (22%), Positives = 30/95 (31%), Gaps = 21/95 (22%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLL--------LGEKTPLKTTGL---------- 118
C +CN S T+ H Q H ++ L G P T L
Sbjct: 701 CEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNGEQVFGHSAPAPNTSLSGCGTPSPSK 760
Query: 119 ---RRNYRCTICSVSLNSIEQYHAHLKGSKHQTNL 150
+ +RC +C N H+ KH N+
Sbjct: 761 PKQKPTWRCEVCDYETNVARNLRIHMTSEKHMHNM 795
Score = 30.4 bits (67), Expect = 0.62
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYRCTICSVSLNSIEQ 136
C C M FT A +H + + + L+ ++T L+ + Y+C C V+++ E
Sbjct: 3360 CRKCQMMFTDEDAAVNHQKSFCYFGQ-PLIDPQETVLRVPVSK--YQCLACDVAISGNEA 3416
Query: 137 YHAHLKGSKHQ 147
HL+ S H+
Sbjct: 3417 LSQHLQSSLHK 3427
Score = 30.0 bits (66), Expect = 0.81
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 20/108 (18%)
Query: 61 RSENGSDADMVDKNKCCTL----CNMSFTSAVVADSHYQGK--------IHAK----RLK 104
RS G M +N C TL CN + ++H + K ++ K +
Sbjct: 626 RSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKTGQPHPR 685
Query: 105 LLLGEKTPLKTTGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLKN 152
L GE T G + +RC +C+ S + H++ KH N++N
Sbjct: 686 LARGESY---TCGYKP-FRCEVCNYSTTTKGNLSIHMQSDKHLNNVQN 729
Score = 27.7 bits (60), Expect = 4.0
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRR---------NYRCTIC 127
C LCN + H + H ++ +L+ K K+ R + +C C
Sbjct: 919 CKLCNYNTQLKANFQLHCKTDKHMQKYQLVAHIKEGGKSNEWRLKCIAIGNPVHLKCNAC 978
Query: 128 SVSLNSIEQYHAHLKGSKHQTNLK 151
NS+++ H +H+ LK
Sbjct: 979 DYYTNSVDKLRLHTTNHRHEAALK 1002
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 43.1 bits (100), Expect = 9e-05
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYR----CTICSVSLN 132
C +C +S H G+ H K+ +KT ++ G R + C +C+VS
Sbjct: 273 CDICKISCAGPQTYREHLGGQKHRKKEA---AQKTGVQPNGSPRGVQAQLHCDLCAVSCT 329
Query: 133 SIEQYHAHLKGSKHQTNLK 151
+ Y AH++GSKHQ K
Sbjct: 330 GADAYAAHIRGSKHQKVFK 348
Score = 28.5 bits (62), Expect = 2.3
Identities = 28/100 (28%), Positives = 35/100 (35%), Gaps = 15/100 (15%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKN 74
YC +C H +KH K + G P NGS V
Sbjct: 272 YCDICKISCAGPQTYREHLGGQKHRKKEAAQ-----KTGVQP-------NGSPRG-VQAQ 318
Query: 75 KCCTLCNMSFTSAVVADSHYQGKIHAKRLKL--LLGEKTP 112
C LC +S T A +H +G H K KL LG+ P
Sbjct: 319 LHCDLCAVSCTGADAYAAHIRGSKHQKVFKLHAKLGKPIP 358
Score = 27.7 bits (60), Expect = 4.0
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 122 YRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
+ C +C S N + H++G +H+ + K
Sbjct: 468 FHCKLCECSFNDLNAKDLHVRGRRHRLQYRKK 499
>gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2790
Score = 42.7 bits (99), Expect = 1e-04
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKT----------PLKTTGLRRNYRCTI 126
CT+C SFT + HY H ++K + + P T + ++CT+
Sbjct: 1411 CTVCKESFTQKNILLVHYNSVSHLHKMKKAAIDPSAPARGEAGAPPTTTAATDKPFKCTV 1470
Query: 127 CSVSLNSIEQYHAHLKGSKHQT 148
C VS N H++ HQT
Sbjct: 1471 CRVSYNQSSTLEIHMRSVLHQT 1492
Score = 40.4 bits (93), Expect = 6e-04
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 11/124 (8%)
Query: 2 KSSDIDQDLFTDSY----CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPA 57
K+++ D F D C VC ++ + HY S H K++ + D PA
Sbjct: 1393 KTTNFALDKFLDPARPYKCTVCKESFTQKNILLVHYNSVSHLHKMKKAAI----DPSAPA 1448
Query: 58 KRLRSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTG 117
+ + DK CT+C +S+ + + H + +H R + G KT K G
Sbjct: 1449 RGEAGAPPTTTAATDKPFKCTVCRVSYNQSSTLEIHMRSVLHQTRSR---GTKTDSKIEG 1505
Query: 118 LRRN 121
R+
Sbjct: 1506 PERS 1509
Score = 33.1 bits (74), Expect = 0.095
Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 17/139 (12%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDG----GCPAKRLRSENGSDADMV 71
CK+C ++ H ++ KHA K +L H R+G G P+ + +
Sbjct: 844 CKLCCYGTQLKANFQLHLKTDKHAQKYQL--AAHLREGGGAMGTPSPASLGDGAPYGSVS 901
Query: 72 DKNKCCTLCNMSFTSAVVADSHYQGKIHAKR---LKLLLGEKTPLKTTGLRRNYRCTICS 128
+ C +C+ S H +G H + K+ LG + L Y C +C+
Sbjct: 902 PLHLRCNICDFESNSKEKMQLHARGAAHEENSQIYKVRLGAELGL--------YHCLLCA 953
Query: 129 VSLNSIEQYHAHLKGSKHQ 147
S HL+ H+
Sbjct: 954 WETPSRLAVLQHLRTPAHR 972
Score = 31.2 bits (69), Expect = 0.36
Identities = 32/143 (22%), Positives = 49/143 (34%), Gaps = 25/143 (17%)
Query: 22 QLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKNKCCTLCN 81
Q + R H ES H S + GG + R E+ + K C +CN
Sbjct: 550 QTLDVHMREKHPESNSHCS--------YCSAGGAHPRLARGESYNCGY---KPYRCDVCN 598
Query: 82 MSFTSAVVADSHYQGKIHAKRLKLLL----GEKTPL----------KTTGLRRNYRCTIC 127
S T+ H Q H L+ G+ +P K + +++C +C
Sbjct: 599 YSTTTKGNLSIHMQSDKHLANLQGFQAGPGGQGSPTEASLPPSAGDKEPKTKSSWQCKVC 658
Query: 128 SVSLNSIEQYHAHLKGSKHQTNL 150
S N H+ KH N+
Sbjct: 659 SYETNISRNLRIHMTSEKHMQNV 681
Score = 29.6 bits (65), Expect = 1.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 123 RCTICSVSLNSIEQYHAHLKGSKHQTN 149
RC IC NS E+ H +G+ H+ N
Sbjct: 906 RCNICDFESNSKEKMQLHARGAAHEEN 932
Score = 28.1 bits (61), Expect = 3.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 122 YRCTICSVSLNSIEQYHAHLKGSKHQTNLK 151
YRC +C+ S + H++ KH NL+
Sbjct: 592 YRCDVCNYSTTTKGNLSIHMQSDKHLANLQ 621
Score = 27.7 bits (60), Expect = 4.0
Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYRCTICSVSLNSIEQ 136
C C M+F A +H + R G P Y C C V L+ E
Sbjct: 2671 CRQCKMAFDGEAPATAHQRSFCFFGRGS---GGSMPPPLRVPICTYHCLACEVLLSGREA 2727
Query: 137 YHAHLKGSKHQ 147
+HL+ S H+
Sbjct: 2728 LASHLRSSAHR 2738
>gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 42.7 bits (99), Expect = 1e-04
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKT----------PLKTTGLRRNYRCTI 126
CT+C SFT + HY H ++K + + P T + ++CT+
Sbjct: 1327 CTVCKESFTQKNILLVHYNSVSHLHKMKKAAIDPSAPARGEAGAPPTTTAATDKPFKCTV 1386
Query: 127 CSVSLNSIEQYHAHLKGSKHQT 148
C VS N H++ HQT
Sbjct: 1387 CRVSYNQSSTLEIHMRSVLHQT 1408
Score = 40.4 bits (93), Expect = 6e-04
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 11/124 (8%)
Query: 2 KSSDIDQDLFTDSY----CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPA 57
K+++ D F D C VC ++ + HY S H K++ + D PA
Sbjct: 1309 KTTNFALDKFLDPARPYKCTVCKESFTQKNILLVHYNSVSHLHKMKKAAI----DPSAPA 1364
Query: 58 KRLRSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTG 117
+ + DK CT+C +S+ + + H + +H R + G KT K G
Sbjct: 1365 RGEAGAPPTTTAATDKPFKCTVCRVSYNQSSTLEIHMRSVLHQTRSR---GTKTDSKIEG 1421
Query: 118 LRRN 121
R+
Sbjct: 1422 PERS 1425
Score = 33.1 bits (74), Expect = 0.095
Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 17/139 (12%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDG----GCPAKRLRSENGSDADMV 71
CK+C ++ H ++ KHA K +L H R+G G P+ + +
Sbjct: 760 CKLCCYGTQLKANFQLHLKTDKHAQKYQL--AAHLREGGGAMGTPSPASLGDGAPYGSVS 817
Query: 72 DKNKCCTLCNMSFTSAVVADSHYQGKIHAKR---LKLLLGEKTPLKTTGLRRNYRCTICS 128
+ C +C+ S H +G H + K+ LG + L Y C +C+
Sbjct: 818 PLHLRCNICDFESNSKEKMQLHARGAAHEENSQIYKVRLGAELGL--------YHCLLCA 869
Query: 129 VSLNSIEQYHAHLKGSKHQ 147
S HL+ H+
Sbjct: 870 WETPSRLAVLQHLRTPAHR 888
Score = 30.4 bits (67), Expect = 0.62
Identities = 32/143 (22%), Positives = 49/143 (34%), Gaps = 25/143 (17%)
Query: 22 QLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKNKCCTLCN 81
Q + R H ES H S + GG + R E+ + K C +CN
Sbjct: 466 QTLDVHMREKHPESNSHCS--------YCSAGGAHPRLARGESYNCGY---KPYRCDVCN 514
Query: 82 MSFTSAVVADSHYQGKIHAKRLKLLL----GEKTPL----------KTTGLRRNYRCTIC 127
S T+ H Q H L+ G+ +P K + +++C +C
Sbjct: 515 YSTTTKGNLSIHMQSDKHLANLQGFQAGPGGQGSPPEASLPPSAGDKEPKTKSSWQCKVC 574
Query: 128 SVSLNSIEQYHAHLKGSKHQTNL 150
S N H+ KH N+
Sbjct: 575 SYETNISRNLRIHMTSEKHMQNV 597
Score = 29.6 bits (65), Expect = 1.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 123 RCTICSVSLNSIEQYHAHLKGSKHQTN 149
RC IC NS E+ H +G+ H+ N
Sbjct: 822 RCNICDFESNSKEKMQLHARGAAHEEN 848
Score = 28.1 bits (61), Expect = 3.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 122 YRCTICSVSLNSIEQYHAHLKGSKHQTNLK 151
YRC +C+ S + H++ KH NL+
Sbjct: 508 YRCDVCNYSTTTKGNLSIHMQSDKHLANLQ 537
Score = 27.7 bits (60), Expect = 4.0
Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYRCTICSVSLNSIEQ 136
C C M+F A +H + R G P Y C C V L+ E
Sbjct: 2587 CRQCKMAFDGEAPATAHQRSFCFFGRGS---GGSMPPPLRVPICTYHCLACEVLLSGREA 2643
Query: 137 YHAHLKGSKHQ 147
+HL+ S H+
Sbjct: 2644 LASHLRSSAHR 2654
>gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 42.7 bits (99), Expect = 1e-04
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKT----------PLKTTGLRRNYRCTI 126
CT+C SFT + HY H ++K + + P T + ++CT+
Sbjct: 1327 CTVCKESFTQKNILLVHYNSVSHLHKMKKAAIDPSAPARGEAGAPPTTTAATDKPFKCTV 1386
Query: 127 CSVSLNSIEQYHAHLKGSKHQT 148
C VS N H++ HQT
Sbjct: 1387 CRVSYNQSSTLEIHMRSVLHQT 1408
Score = 40.4 bits (93), Expect = 6e-04
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 11/124 (8%)
Query: 2 KSSDIDQDLFTDSY----CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPA 57
K+++ D F D C VC ++ + HY S H K++ + D PA
Sbjct: 1309 KTTNFALDKFLDPARPYKCTVCKESFTQKNILLVHYNSVSHLHKMKKAAI----DPSAPA 1364
Query: 58 KRLRSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTG 117
+ + DK CT+C +S+ + + H + +H R + G KT K G
Sbjct: 1365 RGEAGAPPTTTAATDKPFKCTVCRVSYNQSSTLEIHMRSVLHQTRSR---GTKTDSKIEG 1421
Query: 118 LRRN 121
R+
Sbjct: 1422 PERS 1425
Score = 33.1 bits (74), Expect = 0.095
Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 17/139 (12%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDG----GCPAKRLRSENGSDADMV 71
CK+C ++ H ++ KHA K +L H R+G G P+ + +
Sbjct: 760 CKLCCYGTQLKANFQLHLKTDKHAQKYQL--AAHLREGGGAMGTPSPASLGDGAPYGSVS 817
Query: 72 DKNKCCTLCNMSFTSAVVADSHYQGKIHAKR---LKLLLGEKTPLKTTGLRRNYRCTICS 128
+ C +C+ S H +G H + K+ LG + L Y C +C+
Sbjct: 818 PLHLRCNICDFESNSKEKMQLHARGAAHEENSQIYKVRLGAELGL--------YHCLLCA 869
Query: 129 VSLNSIEQYHAHLKGSKHQ 147
S HL+ H+
Sbjct: 870 WETPSRLAVLQHLRTPAHR 888
Score = 30.4 bits (67), Expect = 0.62
Identities = 32/143 (22%), Positives = 49/143 (34%), Gaps = 25/143 (17%)
Query: 22 QLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKNKCCTLCN 81
Q + R H ES H S + GG + R E+ + K C +CN
Sbjct: 466 QTLDVHMREKHPESNSHCS--------YCSAGGAHPRLARGESYNCGY---KPYRCDVCN 514
Query: 82 MSFTSAVVADSHYQGKIHAKRLKLLL----GEKTPL----------KTTGLRRNYRCTIC 127
S T+ H Q H L+ G+ +P K + +++C +C
Sbjct: 515 YSTTTKGNLSIHMQSDKHLANLQGFQAGPGGQGSPPEASLPPSAGDKEPKTKSSWQCKVC 574
Query: 128 SVSLNSIEQYHAHLKGSKHQTNL 150
S N H+ KH N+
Sbjct: 575 SYETNISRNLRIHMTSEKHMQNV 597
Score = 29.6 bits (65), Expect = 1.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 123 RCTICSVSLNSIEQYHAHLKGSKHQTN 149
RC IC NS E+ H +G+ H+ N
Sbjct: 822 RCNICDFESNSKEKMQLHARGAAHEEN 848
Score = 28.1 bits (61), Expect = 3.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 122 YRCTICSVSLNSIEQYHAHLKGSKHQTNLK 151
YRC +C+ S + H++ KH NL+
Sbjct: 508 YRCDVCNYSTTTKGNLSIHMQSDKHLANLQ 537
Score = 27.7 bits (60), Expect = 4.0
Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYRCTICSVSLNSIEQ 136
C C M+F A +H + R G P Y C C V L+ E
Sbjct: 2587 CRQCKMAFDGEAPATAHQRSFCFFGRGS---GGSMPPPLRVPICTYHCLACEVLLSGREA 2643
Query: 137 YHAHLKGSKHQ 147
+HL+ S H+
Sbjct: 2644 LASHLRSSAHR 2654
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 39.7 bits (91), Expect = 0.001
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLL-----GEKTPLKTTGLRRNYRCTICSVSL 131
CT+C SFT + HY H +LK L G+ P + + ++C C+V+
Sbjct: 1547 CTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPD-NKPFKCNTCNVAY 1605
Query: 132 NSIEQYHAHLKGSKHQTNLK 151
+ H++ HQT +
Sbjct: 1606 SQSSTLEIHMRSVLHQTKAR 1625
Score = 35.8 bits (81), Expect = 0.015
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 80 CNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYRCTICSVSLNSIEQYHA 139
CN F ++ +H+ ++HAKR +L + ++ K YRC CS++ +IE+
Sbjct: 1367 CNQVFKTSAALQTHFN-EVHAKRPQLPVSDRHVYK-------YRCNQCSLAFKTIEKLQL 1418
Query: 140 H 140
H
Sbjct: 1419 H 1419
Score = 33.1 bits (74), Expect = 0.095
Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 7/147 (4%)
Query: 3 SSDIDQDLFTDSY-CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLR 61
S D + + DSY CK+C ++ H ++ KH K +L + H ++GG A R
Sbjct: 972 SEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQL--VAHIKEGG-KANEWR 1028
Query: 62 SENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLG-EKTPLKTTGLRR 120
+ + + V C C+ S H H LKL ++ G
Sbjct: 1029 LKCVAIGNPVHLK--CNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQQHESGVEGESC 1086
Query: 121 NYRCTICSVSLNSIEQYHAHLKGSKHQ 147
Y C +C+ S + H++ KHQ
Sbjct: 1087 YYHCVLCNYSTKAKLNLIQHVRSMKHQ 1113
Score = 30.4 bits (67), Expect = 0.62
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 20/108 (18%)
Query: 61 RSENGSDADMVDKNKCCTL----CNMSFTSAVVADSHYQGK--------IHAK----RLK 104
RS G M +N C TL CN + ++H + K ++ K +
Sbjct: 653 RSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPR 712
Query: 105 LLLGEKTPLKTTGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLKN 152
L GE T G + +RC +C+ S + H++ KH N++N
Sbjct: 713 LARGESY---TCGYKP-FRCEVCNYSTTTKGNLSIHMQSDKHLNNMQN 756
Score = 29.6 bits (65), Expect = 1.1
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 10/103 (9%)
Query: 58 KRLRSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTG 117
+R SE+ A M D +C LC + H + H ++ +L+ K K
Sbjct: 968 ERSLSEDEWKAVMGDSYQC-KLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANE 1026
Query: 118 LRR---------NYRCTICSVSLNSIEQYHAHLKGSKHQTNLK 151
R + +C C NS+E+ H S+H+ +LK
Sbjct: 1027 WRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLK 1069
Score = 28.5 bits (62), Expect = 2.3
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 10/89 (11%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKNK 75
C VC ++ + HY S H K++ L G P +N K
Sbjct: 1547 CTVCKESFTQKNILLVHYNSVSHLHKLK--RALQESATGQPEPTSSPDN--------KPF 1596
Query: 76 CCTLCNMSFTSAVVADSHYQGKIHAKRLK 104
C CN++++ + + H + +H + +
Sbjct: 1597 KCNTCNVAYSQSSTLEIHMRSVLHQTKAR 1625
>gi|15529978 zinc finger protein 622 [Homo sapiens]
Length = 477
Score = 39.3 bits (90), Expect = 0.001
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 16/86 (18%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYR------------- 123
C C ++F A + +HY+ H L+ + P+ G + R
Sbjct: 6 CITCRVAFRDADMQRAHYKTDWHRYNLRRKVASMAPVTAEGFQERVRAQRAVAEEESKGS 65
Query: 124 ---CTICSVSLNSIEQYHAHLKGSKH 146
CT+CS S Y HLK +H
Sbjct: 66 ATYCTVCSKKFASFNAYENHLKSRRH 91
Score = 28.1 bits (61), Expect = 3.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 122 YRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
Y C C V+ + AH K H+ NL+ K
Sbjct: 4 YTCITCRVAFRDADMQRAHYKTDWHRYNLRRK 35
>gi|195972903 zinc finger protein 385A isoform a [Homo sapiens]
Length = 386
Score = 38.1 bits (87), Expect = 0.003
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 18/118 (15%)
Query: 52 DGGCPAKRLRSENGSDADMVDKNK---CCTLCNMSFTSAVVADSHYQGKIHAKRLKLL-- 106
+GG PA S G + +K K C LC ++ S ++H +G H L+
Sbjct: 177 EGGTPAPA--SLPGGSKEEEEKAKRLLYCALCKVAVNSLSQLEAHNKGTKHKTILEARSG 234
Query: 107 ---------LGEKTP--LKTTGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
LG TP + R + C IC+V +NS Q H+ +H+ + K
Sbjct: 235 LGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGK 292
Score = 37.7 bits (86), Expect = 0.004
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLR 119
C +C + F S A++HY+G HA+R+K + KT + G+R
Sbjct: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVR 118
Score = 33.9 bits (76), Expect = 0.056
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 11/90 (12%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRL-----RSENGSDAD 69
YC +C + S SQ AH + KH + +L R G P K + +A
Sbjct: 202 YCALCKVAVNSLSQLEAHNKGTKHKT------ILEARSGLGPIKAYPRLGPPTPGEPEAP 255
Query: 70 MVDKNKCCTLCNMSFTSAVVADSHYQGKIH 99
D+ C +CN+ S V H + H
Sbjct: 256 AQDRTFHCEICNVKVNSEVQLKQHISSRRH 285
Score = 32.0 bits (71), Expect = 0.21
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVR 43
C +C + S+SQ AHY+ +HA +V+
Sbjct: 76 CNICQIRFNSQSQAEAHYKGNRHARRVK 103
Score = 32.0 bits (71), Expect = 0.21
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 124 CTICSVSLNSIEQYHAHLKGSKHQTNLK 151
C IC + NS Q AH KG++H +K
Sbjct: 76 CNICQIRFNSQSQAEAHYKGNRHARRVK 103
Score = 26.9 bits (58), Expect = 6.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKV 42
+C++C+ ++ SE Q H SR+H V
Sbjct: 262 HCEICNVKVNSEVQLKQHISSRRHRDGV 289
>gi|24308079 zinc finger protein 385A isoform c [Homo sapiens]
Length = 366
Score = 38.1 bits (87), Expect = 0.003
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 18/118 (15%)
Query: 52 DGGCPAKRLRSENGSDADMVDKNK---CCTLCNMSFTSAVVADSHYQGKIHAKRLKLL-- 106
+GG PA S G + +K K C LC ++ S ++H +G H L+
Sbjct: 157 EGGTPAPA--SLPGGSKEEEEKAKRLLYCALCKVAVNSLSQLEAHNKGTKHKTILEARSG 214
Query: 107 ---------LGEKTP--LKTTGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
LG TP + R + C IC+V +NS Q H+ +H+ + K
Sbjct: 215 LGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGK 272
Score = 37.7 bits (86), Expect = 0.004
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLR 119
C +C + F S A++HY+G HA+R+K + KT + G+R
Sbjct: 56 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVR 98
Score = 33.9 bits (76), Expect = 0.056
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 11/90 (12%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRL-----RSENGSDAD 69
YC +C + S SQ AH + KH + +L R G P K + +A
Sbjct: 182 YCALCKVAVNSLSQLEAHNKGTKHKT------ILEARSGLGPIKAYPRLGPPTPGEPEAP 235
Query: 70 MVDKNKCCTLCNMSFTSAVVADSHYQGKIH 99
D+ C +CN+ S V H + H
Sbjct: 236 AQDRTFHCEICNVKVNSEVQLKQHISSRRH 265
Score = 32.0 bits (71), Expect = 0.21
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVR 43
C +C + S+SQ AHY+ +HA +V+
Sbjct: 56 CNICQIRFNSQSQAEAHYKGNRHARRVK 83
Score = 32.0 bits (71), Expect = 0.21
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 124 CTICSVSLNSIEQYHAHLKGSKHQTNLK 151
C IC + NS Q AH KG++H +K
Sbjct: 56 CNICQIRFNSQSQAEAHYKGNRHARRVK 83
Score = 26.9 bits (58), Expect = 6.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKV 42
+C++C+ ++ SE Q H SR+H V
Sbjct: 242 HCEICNVKVNSEVQLKQHISSRRHRDGV 269
>gi|195972905 zinc finger protein 385A isoform b [Homo sapiens]
Length = 305
Score = 37.7 bits (86), Expect = 0.004
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLR 119
C +C + F S A++HY+G HA+R+K + KT + G+R
Sbjct: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVR 118
Score = 37.4 bits (85), Expect = 0.005
Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 26/150 (17%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKV----------RLYYMLHPRDGGCPAKRLRSENG 65
C +C + S+SQ AHY+ +HA +V R + P D P + +G
Sbjct: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 135
Query: 66 SDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTP--LKTTGLRRNYR 123
K+K ++ G I A LG TP + R +
Sbjct: 136 VAPRPGTKHK-----------TILEARSGLGPIKAYP---RLGPPTPGEPEAPAQDRTFH 181
Query: 124 CTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
C IC+V +NS Q H+ +H+ + K
Sbjct: 182 CEICNVKVNSEVQLKQHISSRRHRDGVAGK 211
Score = 26.9 bits (58), Expect = 6.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKV 42
+C++C+ ++ SE Q H SR+H V
Sbjct: 181 HCEICNVKVNSEVQLKQHISSRRHRDGV 208
>gi|58533172 zinc finger, matrin type 1 isoform 3 [Homo sapiens]
Length = 467
Score = 37.0 bits (84), Expect = 0.007
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 120 RNYRCTICSVSLNSIEQYHAHLKGSKHQ 147
R Y C ICS++ S++ + +H++GS+HQ
Sbjct: 2 RTYVCHICSIAFTSLDMFRSHMQGSEHQ 29
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 36.6 bits (83), Expect = 0.009
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKT 111
C +C++ F SA A++HY+G HA++LK + K+
Sbjct: 739 CNICHLRFNSANQAEAHYKGHKHARKLKAVEAAKS 773
Score = 33.1 bits (74), Expect = 0.095
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 124 CTICSVSLNSIEQYHAHLKGSKHQTNLK 151
C IC + NS Q AH KG KH LK
Sbjct: 739 CNICHLRFNSANQAEAHYKGHKHARKLK 766
Score = 30.4 bits (67), Expect = 0.62
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVR 43
C +C + S +Q AHY+ KHA K++
Sbjct: 739 CNICHLRFNSANQAEAHYKGHKHARKLK 766
Score = 29.3 bits (64), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 124 CTICSVSLNSIEQYHAHLKGSKHQ 147
C C V++NS Q AH G+KH+
Sbjct: 883 CPTCKVTVNSASQLQAHNTGAKHR 906
Score = 27.7 bits (60), Expect = 4.0
Identities = 25/99 (25%), Positives = 30/99 (30%), Gaps = 12/99 (12%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKN 74
YC C + S SQ AH KH + R G P R G A V
Sbjct: 882 YCPTCKVTVNSASQLQAHNTGAKHRWMMEGQRGAPRRSRGRPVS--RGGAGHKAKRVTGG 939
Query: 75 K----------CCTLCNMSFTSAVVADSHYQGKIHAKRL 103
+ C LC + S H + H RL
Sbjct: 940 RGGRQGPSPAFHCALCQLQVNSETQLKQHMSSRRHKDRL 978
Score = 27.7 bits (60), Expect = 4.0
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 122 YRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
+ C +C + +NS Q H+ +H+ L K
Sbjct: 950 FHCALCQLQVNSETQLKQHMSSRRHKDRLAGK 981
>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 36.6 bits (83), Expect = 0.009
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKT 111
C +C++ F SA A++HY+G HA++LK + K+
Sbjct: 739 CNICHLRFNSANQAEAHYKGHKHARKLKAVEAAKS 773
Score = 33.1 bits (74), Expect = 0.095
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 124 CTICSVSLNSIEQYHAHLKGSKHQTNLK 151
C IC + NS Q AH KG KH LK
Sbjct: 739 CNICHLRFNSANQAEAHYKGHKHARKLK 766
Score = 30.4 bits (67), Expect = 0.62
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVR 43
C +C + S +Q AHY+ KHA K++
Sbjct: 739 CNICHLRFNSANQAEAHYKGHKHARKLK 766
Score = 29.3 bits (64), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 124 CTICSVSLNSIEQYHAHLKGSKHQ 147
C C V++NS Q AH G+KH+
Sbjct: 883 CPTCKVTVNSASQLQAHNTGAKHR 906
Score = 27.7 bits (60), Expect = 4.0
Identities = 25/99 (25%), Positives = 30/99 (30%), Gaps = 12/99 (12%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKN 74
YC C + S SQ AH KH + R G P R G A V
Sbjct: 882 YCPTCKVTVNSASQLQAHNTGAKHRWMMEGQRGAPRRSRGRPVS--RGGAGHKAKRVTGG 939
Query: 75 K----------CCTLCNMSFTSAVVADSHYQGKIHAKRL 103
+ C LC + S H + H RL
Sbjct: 940 RGGRQGPSPAFHCALCQLQVNSETQLKQHMSSRRHKDRL 978
Score = 27.7 bits (60), Expect = 4.0
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 122 YRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
+ C +C + +NS Q H+ +H+ L K
Sbjct: 950 FHCALCQLQVNSETQLKQHMSSRRHKDRLAGK 981
>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 36.6 bits (83), Expect = 0.009
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKT 111
C +C++ F SA A++HY+G HA++LK + K+
Sbjct: 739 CNICHLRFNSANQAEAHYKGHKHARKLKAVEAAKS 773
Score = 33.1 bits (74), Expect = 0.095
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 124 CTICSVSLNSIEQYHAHLKGSKHQTNLK 151
C IC + NS Q AH KG KH LK
Sbjct: 739 CNICHLRFNSANQAEAHYKGHKHARKLK 766
Score = 30.4 bits (67), Expect = 0.62
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 16 CKVCSAQLISESQRVAHYESRKHASKVR 43
C +C + S +Q AHY+ KHA K++
Sbjct: 739 CNICHLRFNSANQAEAHYKGHKHARKLK 766
Score = 29.3 bits (64), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 124 CTICSVSLNSIEQYHAHLKGSKHQ 147
C C V++NS Q AH G+KH+
Sbjct: 883 CPTCKVTVNSASQLQAHNTGAKHR 906
Score = 27.7 bits (60), Expect = 4.0
Identities = 25/99 (25%), Positives = 30/99 (30%), Gaps = 12/99 (12%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKN 74
YC C + S SQ AH KH + R G P R G A V
Sbjct: 882 YCPTCKVTVNSASQLQAHNTGAKHRWMMEGQRGAPRRSRGRPVS--RGGAGHKAKRVTGG 939
Query: 75 K----------CCTLCNMSFTSAVVADSHYQGKIHAKRL 103
+ C LC + S H + H RL
Sbjct: 940 RGGRQGPSPAFHCALCQLQVNSETQLKQHMSSRRHKDRL 978
Score = 27.7 bits (60), Expect = 4.0
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 122 YRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
+ C +C + +NS Q H+ +H+ L K
Sbjct: 950 FHCALCQLQVNSETQLKQHMSSRRHKDRLAGK 981
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 36.6 bits (83), Expect = 0.009
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 27/148 (18%)
Query: 16 CKVCSAQLISESQRVAHYESR--------KHASKVRLYY-MLHPRDGGCPAKRLRSENGS 66
C +CS Q S+ V+HY R +HASK+ Y+ ++ + P E G+
Sbjct: 1769 CSLCSFQSFSKKGIVSHYMKRHPGVFPKKQHASKLGGYFTAVYADEHEKPTLMEEEERGN 1828
Query: 67 --------DADMVD--KNKCCTLCNMSFTSAVVADSHYQGKIHAKRLK---LLLGEKTPL 113
+A ++ +C +SF++A + HY H++ LK ++LG L
Sbjct: 1829 FEKAEVEGEAQEIEWLPFRCIKCFKLSFSTAELLCMHYTDH-HSRDLKRDFIILGNGPRL 1887
Query: 114 KTTGLRRNYRCTICSVSLNSIEQYHAHL 141
+ + Y+C C L S + +HL
Sbjct: 1888 QNS----TYQCKHCDSKLQSTAELTSHL 1911
Score = 30.4 bits (67), Expect = 0.62
Identities = 28/138 (20%), Positives = 45/138 (32%), Gaps = 26/138 (18%)
Query: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKN 74
YCK C S HY+ K Y+L P D +
Sbjct: 844 YCKHCDFNNKSARSVSTHYQRMHPYIKFSFRYILDPNDHSAVYR---------------- 887
Query: 75 KCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYRCTICSVSLNSI 134
C C + +T+ HY G+ H + + +L + + L YRC CS + ++
Sbjct: 888 --CLECYIDYTNFEDLQQHY-GEHHPEAMNVLNFDHSDL-------IYRCRFCSYTSPNV 937
Query: 135 EQYHAHLKGSKHQTNLKN 152
H + + N
Sbjct: 938 RSLMPHYQRMHPTVKINN 955
>gi|223890230 zinc finger protein, multitype 2 [Homo sapiens]
Length = 1151
Score = 36.6 bits (83), Expect = 0.009
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 74 NKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYRCTICSVSLNS 133
NKC + T + V+ I + L E+T L + CT+C +S N
Sbjct: 806 NKCVPVSKCDTTHSSVSCLEMDVPIDLSKKCLSQSERTTTSPKRLLDYHECTVCKISFNK 865
Query: 134 IEQYHAHLKG----SKHQTN 149
+E Y AH + + HQ N
Sbjct: 866 VENYLAHKQNFCPVTAHQRN 885
Score = 32.0 bits (71), Expect = 0.21
Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 26/136 (19%)
Query: 6 IDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENG 65
+++D+F CK C SE AH +YY + P EN
Sbjct: 245 VNKDIFP---CKSCGIWYRSERNLQAHL----------MYYCSGRQREAAPVSE---ENE 288
Query: 66 SDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYRCT 125
A + C SF++A + H K ++ L LK CT
Sbjct: 289 DSAHQISSLCPFPQCTKSFSNARALEMHLNSHSGVK-MEEFLPPGASLK---------CT 338
Query: 126 ICSVSLNSIEQYHAHL 141
+CS + +S+ +H HL
Sbjct: 339 VCSYTADSVINFHQHL 354
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 36.2 bits (82), Expect = 0.011
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 86 SAVVADSHYQGKIHAKRLKLLLGE-----KTPLKTTGLRRNYRCTICSVSLNSIEQYHAH 140
S VA S + +RL+ L E K P +Y C +C N+ Y AH
Sbjct: 13 SGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEGSYLAH 72
Query: 141 LKGSKHQTNLKNK 153
+G KHQTNL +
Sbjct: 73 TQGKKHQTNLARR 85
>gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens]
Length = 1495
Score = 35.0 bits (79), Expect = 0.025
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 122 YRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 153
Y C +C V + SI H H+K +H+ N+K K
Sbjct: 244 YTCRLCDVLIESIAFAHKHIKEKRHKKNIKEK 275
>gi|41349474 PR domain containing 4 [Homo sapiens]
Length = 801
Score = 35.0 bits (79), Expect = 0.025
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
Query: 77 CTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEK---------TPLKTTGLRRNYRCTIC 127
C++C +F S H+ G + K K K T LK ++NYRCT+C
Sbjct: 592 CSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLC 651
Query: 128 SVSLNSIEQYHAHLKGSKHQTNLK 151
S +H+ + NLK
Sbjct: 652 DKSFTQKAHLESHMVIHTGEKNLK 675
Score = 28.1 bits (61), Expect = 3.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 73 KNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRN 121
KN CTLC+ SFT +SH K LK +K ++ L+++
Sbjct: 644 KNYRCTLCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQH 692
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.130 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,774,693
Number of Sequences: 37866
Number of extensions: 232863
Number of successful extensions: 1200
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 830
Number of HSP's gapped (non-prelim): 351
length of query: 153
length of database: 18,247,518
effective HSP length: 93
effective length of query: 60
effective length of database: 14,725,980
effective search space: 883558800
effective search space used: 883558800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.