Search of human proteins with 208610002

Search of human proteins with 208610002

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|208610002 atlastin GTPase 2 isoform 2 [Homo sapiens]
         (583 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|208610002 atlastin GTPase 2 isoform 2 [Homo sapiens]              1181   0.0  
gi|208610000 atlastin GTPase 2 isoform 1 [Homo sapiens]              1109   0.0  
gi|189181742 atlastin GTPase 1 isoform b [Homo sapiens]               761   0.0  
gi|74024917 atlastin GTPase 1 isoform b [Homo sapiens]                761   0.0  
gi|19923445 atlastin GTPase 1 isoform a [Homo sapiens]                759   0.0  
gi|45827806 atlastin 3 [Homo sapiens]                                 707   0.0  
gi|14149631 ring finger protein 112 [Homo sapiens]                     86   7e-17
gi|31377634 guanylate binding protein 4 [Homo sapiens]                 74   3e-13
gi|148234215 guanylate binding protein 4-like [Homo sapiens]           73   8e-13
gi|197333737 guanylate-binding protein 5 [Homo sapiens]                72   2e-12
gi|16418425 guanylate-binding protein 5 [Homo sapiens]                 72   2e-12
gi|112382372 guanylate binding protein 3 [Homo sapiens]                70   5e-12
gi|38327558 guanylate binding protein 2, interferon-inducible [H...    68   2e-11
gi|157671915 guanylate binding protein family, member 6 [Homo sa...    67   6e-11
gi|166706903 guanylate binding protein 1, interferon-inducible, ...    63   9e-10
gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]        36   0.086
gi|4758942 septin 4 isoform 1 [Homo sapiens]                           32   1.2  
gi|17986247 septin 4 isoform 3 [Homo sapiens]                          32   1.2  
gi|22748667 Na+/K+ -ATPase alpha 3 subunit [Homo sapiens]              32   1.2  
gi|58331187 T-cell lymphoma invasion and metastasis 2 isoform a ...    30   4.7  
gi|32967591 phosducin isoform a [Homo sapiens]                         30   6.1  
gi|12408668 phosducin isoform b [Homo sapiens]                         30   6.1  
gi|115511020 Smg-6 homolog, nonsense mediated mRNA decay factor ...    30   6.1  
gi|23510381 transportin 1 isoform 2 [Homo sapiens]                     30   8.0  
gi|133925811 transportin 1 isoform 1 [Homo sapiens]                    30   8.0  
gi|164519084 RAB GTPase activating protein 1 [Homo sapiens]            30   8.0  

>gi|208610002 atlastin GTPase 2 isoform 2 [Homo sapiens]
          Length = 583

 Score = 1181 bits (3055), Expect = 0.0
 Identities = 583/583 (100%), Positives = 583/583 (100%)

Query: 1   MAEGDEAARGQQPHQGLWRRRRTSDPSAAVNHVSSTTSLGENYEDDDLVNSDEVMKKPCP 60
           MAEGDEAARGQQPHQGLWRRRRTSDPSAAVNHVSSTTSLGENYEDDDLVNSDEVMKKPCP
Sbjct: 1   MAEGDEAARGQQPHQGLWRRRRTSDPSAAVNHVSSTTSLGENYEDDDLVNSDEVMKKPCP 60

Query: 61  VQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYN 120
           VQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYN
Sbjct: 61  VQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYN 120

Query: 121 KDSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDS 180
           KDSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDS
Sbjct: 121 KDSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDS 180

Query: 181 QSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLM 240
           QSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLM
Sbjct: 181 QSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLM 240

Query: 241 FLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPG 300
           FLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPG
Sbjct: 241 FLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPG 300

Query: 301 LKVATNPSFDGRLKDIDEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYI 360
           LKVATNPSFDGRLKDIDEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYI
Sbjct: 301 LKVATNPSFDGRLKDIDEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYI 360

Query: 361 KIYQGEELPHPKSMLQATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAPSDLERKHLD 420
           KIYQGEELPHPKSMLQATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAPSDLERKHLD
Sbjct: 361 KIYQGEELPHPKSMLQATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAPSDLERKHLD 420

Query: 421 LKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEETYANFIKHNDGKNIFYAARTPATLFA 480
           LKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEETYANFIKHNDGKNIFYAARTPATLFA
Sbjct: 421 LKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEETYANFIKHNDGKNIFYAARTPATLFA 480

Query: 481 VMFAMYIISGLTGFIGLNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQIAET 540
           VMFAMYIISGLTGFIGLNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQIAET
Sbjct: 481 VMFAMYIISGLTGFIGLNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQIAET 540

Query: 541 LWEQVLKPLGDNLMEENIRQSVTNSIKAGLTDQVSHHARLKTD 583
           LWEQVLKPLGDNLMEENIRQSVTNSIKAGLTDQVSHHARLKTD
Sbjct: 541 LWEQVLKPLGDNLMEENIRQSVTNSIKAGLTDQVSHHARLKTD 583


>gi|208610000 atlastin GTPase 2 isoform 1 [Homo sapiens]
          Length = 579

 Score = 1109 bits (2868), Expect = 0.0
 Identities = 547/571 (95%), Positives = 557/571 (97%)

Query: 1   MAEGDEAARGQQPHQGLWRRRRTSDPSAAVNHVSSTTSLGENYEDDDLVNSDEVMKKPCP 60
           MAEGDEAARGQQPHQGLWRRRRTSDPSAAVNHVSSTTSLGENYEDDDLVNSDEVMKKPCP
Sbjct: 1   MAEGDEAARGQQPHQGLWRRRRTSDPSAAVNHVSSTTSLGENYEDDDLVNSDEVMKKPCP 60

Query: 61  VQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYN 120
           VQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYN
Sbjct: 61  VQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYN 120

Query: 121 KDSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDS 180
           KDSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDS
Sbjct: 121 KDSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDS 180

Query: 181 QSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLM 240
           QSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLM
Sbjct: 181 QSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLM 240

Query: 241 FLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPG 300
           FLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPG
Sbjct: 241 FLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPG 300

Query: 301 LKVATNPSFDGRLKDIDEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYI 360
           LKVATNPSFDGRLKDIDEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYI
Sbjct: 301 LKVATNPSFDGRLKDIDEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYI 360

Query: 361 KIYQGEELPHPKSMLQATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAPSDLERKHLD 420
           KIYQGEELPHPKSMLQATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAPSDLERKHLD
Sbjct: 361 KIYQGEELPHPKSMLQATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAPSDLERKHLD 420

Query: 421 LKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEETYANFIKHNDGKNIFYAARTPATLFA 480
           LKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEETYANFIKHNDGKNIFYAARTPATLFA
Sbjct: 421 LKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEETYANFIKHNDGKNIFYAARTPATLFA 480

Query: 481 VMFAMYIISGLTGFIGLNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQIAET 540
           VMFAMYIISGLTGFIGLNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQIAET
Sbjct: 481 VMFAMYIISGLTGFIGLNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQIAET 540

Query: 541 LWEQVLKPLGDNLMEENIRQSVTNSIKAGLT 571
           LWEQV   L +      + ++++++ +  L+
Sbjct: 541 LWEQVFSKLFEVTRRRMVHRALSSAQRQRLS 571


>gi|189181742 atlastin GTPase 1 isoform b [Homo sapiens]
          Length = 553

 Score =  761 bits (1964), Expect = 0.0
 Identities = 357/498 (71%), Positives = 434/498 (87%), Gaps = 1/498 (0%)

Query: 52  DEVMKKPCPVQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLL 111
           +E +KK  PVQ+++  +DDH+FELDE AL +ILL E +RD  +V VSVAGAFRKGKSFL+
Sbjct: 26  EEPVKKAGPVQVLIV-KDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLM 84

Query: 112 DFMLRYMYNKDSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLL 171
           DFMLRYMYN++S  W+G  NEPLTGF+WRGG ERETTGIQ+W+E+F+I++P+G KVAVLL
Sbjct: 85  DFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLL 144

Query: 172 MDTQGAFDSQSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEI 231
           MDTQG FDSQST++D ATVFALSTM SS+QVYNLSQN+QEDDLQHLQLFTEYGRLAMEE 
Sbjct: 145 MDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEET 204

Query: 232 YQKPFQTLMFLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNL 291
           + KPFQ+L+FL+RDWS+PYE SYG +GG +FLEKRL+V  NQHEELQNVRKHIH+CF+N+
Sbjct: 205 FLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSCFTNI 264

Query: 292 GCFLLPHPGLKVATNPSFDGRLKDIDEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRD 351
            CFLLPHPGLKVATNP+FDG+LK+ID++F + L+ L+P LL+PE+L  KEI+G+K+TCR 
Sbjct: 265 SCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRG 324

Query: 352 LVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAP 411
           LVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVA A+DTY K ME++CGGDKP++AP
Sbjct: 325 LVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAP 384

Query: 412 SDLERKHLDLKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEETYANFIKHNDGKNIFYA 471
           +DL+ KHL LKE ++K FR VKKMGG+EF RRY  QLE+EI+E Y  +IKHND KNIF+A
Sbjct: 385 NDLQTKHLQLKEESVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHA 444

Query: 472 ARTPATLFAVMFAMYIISGLTGFIGLNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIG 531
           ARTPATLF V+F  Y+I+G+TGFIGL+ IA LCN++MGL LI LCTWAY++YSGE+RE+G
Sbjct: 445 ARTPATLFVVIFITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELG 504

Query: 532 TVIDQIAETLWEQVLKPL 549
            VIDQ+A  LW+Q L  L
Sbjct: 505 AVIDQVAAALWDQALYKL 522


>gi|74024917 atlastin GTPase 1 isoform b [Homo sapiens]
          Length = 553

 Score =  761 bits (1964), Expect = 0.0
 Identities = 357/498 (71%), Positives = 434/498 (87%), Gaps = 1/498 (0%)

Query: 52  DEVMKKPCPVQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLL 111
           +E +KK  PVQ+++  +DDH+FELDE AL +ILL E +RD  +V VSVAGAFRKGKSFL+
Sbjct: 26  EEPVKKAGPVQVLIV-KDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLM 84

Query: 112 DFMLRYMYNKDSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLL 171
           DFMLRYMYN++S  W+G  NEPLTGF+WRGG ERETTGIQ+W+E+F+I++P+G KVAVLL
Sbjct: 85  DFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLL 144

Query: 172 MDTQGAFDSQSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEI 231
           MDTQG FDSQST++D ATVFALSTM SS+QVYNLSQN+QEDDLQHLQLFTEYGRLAMEE 
Sbjct: 145 MDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEET 204

Query: 232 YQKPFQTLMFLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNL 291
           + KPFQ+L+FL+RDWS+PYE SYG +GG +FLEKRL+V  NQHEELQNVRKHIH+CF+N+
Sbjct: 205 FLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSCFTNI 264

Query: 292 GCFLLPHPGLKVATNPSFDGRLKDIDEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRD 351
            CFLLPHPGLKVATNP+FDG+LK+ID++F + L+ L+P LL+PE+L  KEI+G+K+TCR 
Sbjct: 265 SCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRG 324

Query: 352 LVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAP 411
           LVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVA A+DTY K ME++CGGDKP++AP
Sbjct: 325 LVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAP 384

Query: 412 SDLERKHLDLKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEETYANFIKHNDGKNIFYA 471
           +DL+ KHL LKE ++K FR VKKMGG+EF RRY  QLE+EI+E Y  +IKHND KNIF+A
Sbjct: 385 NDLQTKHLQLKEESVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHA 444

Query: 472 ARTPATLFAVMFAMYIISGLTGFIGLNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIG 531
           ARTPATLF V+F  Y+I+G+TGFIGL+ IA LCN++MGL LI LCTWAY++YSGE+RE+G
Sbjct: 445 ARTPATLFVVIFITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELG 504

Query: 532 TVIDQIAETLWEQVLKPL 549
            VIDQ+A  LW+Q L  L
Sbjct: 505 AVIDQVAAALWDQALYKL 522


>gi|19923445 atlastin GTPase 1 isoform a [Homo sapiens]
          Length = 558

 Score =  759 bits (1959), Expect = 0.0
 Identities = 355/493 (72%), Positives = 432/493 (87%), Gaps = 1/493 (0%)

Query: 52  DEVMKKPCPVQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLL 111
           +E +KK  PVQ+++  +DDH+FELDE AL +ILL E +RD  +V VSVAGAFRKGKSFL+
Sbjct: 26  EEPVKKAGPVQVLIV-KDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLM 84

Query: 112 DFMLRYMYNKDSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLL 171
           DFMLRYMYN++S  W+G  NEPLTGF+WRGG ERETTGIQ+W+E+F+I++P+G KVAVLL
Sbjct: 85  DFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLL 144

Query: 172 MDTQGAFDSQSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEI 231
           MDTQG FDSQST++D ATVFALSTM SS+QVYNLSQN+QEDDLQHLQLFTEYGRLAMEE 
Sbjct: 145 MDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEET 204

Query: 232 YQKPFQTLMFLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNL 291
           + KPFQ+L+FL+RDWS+PYE SYG +GG +FLEKRL+V  NQHEELQNVRKHIH+CF+N+
Sbjct: 205 FLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSCFTNI 264

Query: 292 GCFLLPHPGLKVATNPSFDGRLKDIDEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRD 351
            CFLLPHPGLKVATNP+FDG+LK+ID++F + L+ L+P LL+PE+L  KEI+G+K+TCR 
Sbjct: 265 SCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRG 324

Query: 352 LVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAP 411
           LVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVA A+DTY K ME++CGGDKP++AP
Sbjct: 325 LVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAP 384

Query: 412 SDLERKHLDLKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEETYANFIKHNDGKNIFYA 471
           +DL+ KHL LKE ++K FR VKKMGG+EF RRY  QLE+EI+E Y  +IKHND KNIF+A
Sbjct: 385 NDLQTKHLQLKEESVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHA 444

Query: 472 ARTPATLFAVMFAMYIISGLTGFIGLNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIG 531
           ARTPATLF V+F  Y+I+G+TGFIGL+ IA LCN++MGL LI LCTWAY++YSGE+RE+G
Sbjct: 445 ARTPATLFVVIFITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELG 504

Query: 532 TVIDQIAETLWEQ 544
            VIDQ+A  LW+Q
Sbjct: 505 AVIDQVAAALWDQ 517


>gi|45827806 atlastin 3 [Homo sapiens]
          Length = 541

 Score =  707 bits (1825), Expect = 0.0
 Identities = 339/517 (65%), Positives = 421/517 (81%), Gaps = 6/517 (1%)

Query: 51  SDEVMK--KPCPVQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKS 108
           +D+ M+  KP PVQ+VL  +D H+FELDE+AL  ILLQ+HIRDL++VVVSVAGAFRKGKS
Sbjct: 15  ADDAMESSKPGPVQVVLVQKDQHSFELDEKALASILLQDHIRDLDVVVVSVAGAFRKGKS 74

Query: 109 FLLDFMLRYMYNKDSQ---SWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGT 165
           F+LDFMLRY+Y++      +W+G   EPLTGF+WRGG + ETTGIQ+W+EVF +++P G 
Sbjct: 75  FILDFMLRYLYSQKESGHSNWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGK 134

Query: 166 KVAVLLMDTQGAFDSQSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGR 225
           KVAV+LMDTQGAFDSQST+KDCAT+FALSTMTSSVQ+YNLSQNIQEDDLQ LQLFTEYGR
Sbjct: 135 KVAVVLMDTQGAFDSQSTVKDCATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGR 194

Query: 226 LAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEELQNVRKHIH 285
           LAM+EI+QKPFQTLMFL+RDWS+PYE+SYGL+GG  FL+KRLQVK++QHEE+QNVR HIH
Sbjct: 195 LAMDEIFQKPFQTLMFLVRDWSFPYEYSYGLQGGMAFLDKRLQVKEHQHEEIQNVRNHIH 254

Query: 286 NCFSNLGCFLLPHPGLKVATNPSFDGRLKDIDEDFKRELRNLVPLLLAPENLVEKEISGS 345
           +CFS++ CFLLPHPGL+VAT+P FDG+LKDI  +FK +L+ L+P +L P  L+EKEI+GS
Sbjct: 255 SCFSDVTCFLLPHPGLQVATSPDFDGKLKDIAGEFKEQLQALIPYVLNPSKLMEKEINGS 314

Query: 346 KVTCRDLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAGARDTYCKSMEQVCGGD 405
           KVTCR L+EYFKAYIKIYQGE+LPHPKSMLQATAEANNLAA A A+D Y  +ME+VCGG+
Sbjct: 315 KVTCRGLLEYFKAYIKIYQGEDLPHPKSMLQATAEANNLAAAASAKDIYYNNMEEVCGGE 374

Query: 406 KPYIAPSDLERKHLDLKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEETYANFIKHNDG 465
           KPY++P  LE KH + K++A+  F+  KKMGG +F  RYQ +LE EI+E Y NF KHN  
Sbjct: 375 KPYLSPDILEEKHCEFKQLALDHFKKTKKMGGKDFSFRYQQELEEEIKELYENFCKHNGS 434

Query: 466 KNIFYAARTPATLFAVMFAMYIISGLTGFIGLNSIAVLCNLVMGLALIFLCTWAYVKYSG 525
           KN+F   RTPA LF  + A+YI SGLTGFIGL  +A L N ++GL LI L TW Y++YSG
Sbjct: 435 KNVFSTFRTPAVLFTGIVALYIASGLTGFIGLEVVAQLFNCMVGLLLIALLTWGYIRYSG 494

Query: 526 EFREIGTVIDQIAETLWEQVLKPLGDNLMEENIRQSV 562
           ++RE+G  ID  A  + EQ    +G N  +  +R +V
Sbjct: 495 QYRELGGAIDFGAAYVLEQASSHIG-NSTQATVRDAV 530


>gi|14149631 ring finger protein 112 [Homo sapiens]
          Length = 632

 Score = 86.3 bits (212), Expect = 7e-17
 Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 17/248 (6%)

Query: 79  ALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSW--IGGNNEPLTG 136
           A+ + L     RD  + +++V G    GKSFLL+ +L+ +   +S       G    L G
Sbjct: 154 AINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLLQGLPGLESGEGGRPRGGEASLQG 213

Query: 137 FTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTIKDCATVFALSTM 196
             W  G      GI +W+  F++ +  G KVAV L+DT  A   + + +    + AL+TM
Sbjct: 214 CRW--GANGLARGIWMWSHPFLLGK-EGKKVAVFLVDTGDAMSPELSRETRIKLCALTTM 270

Query: 197 TSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGL 256
            SS Q+ + SQ +++ DL +L++F     +  +     P Q L  L+RD S+P +   G 
Sbjct: 271 LSSYQILSTSQELKDTDLDYLEMFVHVAEVMGKHYGMVPIQHLDLLVRDSSHPNKAGQGH 330

Query: 257 EGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPGLKVATNPSFDGRLKDI 316
            G    + +RL  +  + +EL   ++          C LLP PG +   N        D 
Sbjct: 331 VGN---IFQRLSGRYPKVQELLQGKR--------ARCCLLPAPGRR-RMNQGHASPGGDT 378

Query: 317 DEDFKREL 324
           D+DF+  L
Sbjct: 379 DDDFRHLL 386


>gi|31377634 guanylate binding protein 4 [Homo sapiens]
          Length = 640

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 101/438 (23%), Positives = 181/438 (41%), Gaps = 53/438 (12%)

Query: 51  SDEVMKKPCPVQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFL 110
           S+ +M  P    I L    +    ++ +ALE   + + I    +VVV++ G +R GKS+L
Sbjct: 18  SESIMMAP----ICLVENQEEQLTVNSKALE---ILDKISQ-PVVVVAIVGLYRTGKSYL 69

Query: 111 LDFMLRYMYNKDSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVL 170
           ++ +             G  N    GF      + ET GI +W  V  + +PN T V   
Sbjct: 70  MNRLA------------GKRN----GFPLGSTVQSETKGIWMWC-VPHLSKPNHTLV--- 109

Query: 171 LMDTQGAFD-SQSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAME 229
           L+DT+G  D  +S  K+ + +FAL+ + SS  VYN    I    L+ L   TE   L   
Sbjct: 110 LLDTEGLGDVEKSNPKNDSWIFALAVLLSSSFVYNSVSTINHQALEQLHYVTELAELIRA 169

Query: 230 EIYQKP------------FQTLMFLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEEL 277
           +   +P            F   ++ +RD++   +         ++LE  L++   ++ ++
Sbjct: 170 KSCPRPDEAEDSSEFASFFPDFIWTVRDFTLELKLDGNPITEDEYLENALKLIPGKNPKI 229

Query: 278 QN---VRKHIHNCFSNLGCFLLPHP-GLKVATNPSFDGRLKDIDEDFKRELRNLVPLLLA 333
           QN    R+ I + F    CF+   P   K   N   +   ++++  F  +  N    +  
Sbjct: 230 QNSNMPRECIRHFFRKRKCFVFDRPTNDKQYLNHMDEVPEENLERHFLMQSDNFCSYIFT 289

Query: 334 PENLVEKEISGSKVTCRDLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAGARDT 393
                +    G  VT + L      Y+       +P  ++ + A A+  N AAV  A D 
Sbjct: 290 HAK-TKTLREGIIVTGKRLGTLVVTYVDAINSGAVPCLENAVTALAQLENPAAVQRAADH 348

Query: 394 YCKSMEQVCGGDKPYIAPSDLERKHLDLKEVAIKQFRSV-KKMGGDEFCRRYQDQLEAEI 452
           Y + M Q          P+D  ++ LD+     ++  +V  +    +    +Q +L   I
Sbjct: 349 YSQQMAQ------QLRLPTDTLQELLDVHAACEREAIAVFMEHSFKDENHEFQKKLVDTI 402

Query: 453 EETYANFIKHNDGKNIFY 470
           E+   +F+  N+  +  Y
Sbjct: 403 EKKKGDFVLQNEEASAKY 420


>gi|148234215 guanylate binding protein 4-like [Homo sapiens]
          Length = 638

 Score = 72.8 bits (177), Expect = 8e-13
 Identities = 89/395 (22%), Positives = 163/395 (41%), Gaps = 45/395 (11%)

Query: 94  IVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSWIGGNNEPLTGFTWRGGCERETTGIQVW 153
           +VVV++ G +R GKS+L+        NK     + G N+   GF      + ET GI +W
Sbjct: 38  VVVVAIVGLYRTGKSYLM--------NK-----LAGKNK---GFPLGCTVKSETKGIWMW 81

Query: 154 NEVFVIDRPNGTKVAVLLMDTQGAFDSQ-STIKDCATVFALSTMTSSVQVYNLSQNIQED 212
                +  P+     ++L+DT+G  D + S  K  + +FAL+ + SS  VYN    I   
Sbjct: 82  ----CVPHPSKPNHTLILLDTEGLGDMEKSDPKSDSWIFALAVLLSSSFVYNSMGTINHQ 137

Query: 213 DLQHLQLFTEYGRLAMEEIYQKP------------FQTLMFLIRDWSYPYEHSYGLEGGK 260
            L+ L   TE   L   +   +P            F   ++ +RD++   +         
Sbjct: 138 ALEQLHYVTELTELIRAKSCPRPDEVEDSSEFVSFFPDFIWTVRDFTLELKLDGHPITED 197

Query: 261 QFLEKRLQVKQNQHEELQN---VRKHIHNCFSNLGCFLLPHP-GLKVATNPSFDGRLKDI 316
           ++LE  L++   ++ ++QN    R+ I + F    CF+   P   K       + R   +
Sbjct: 198 EYLENALKLISGKNPQIQNSNKPREWIRHFFPKQKCFVFDRPINDKKLLLHVEEVREDQL 257

Query: 317 DEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYIKIYQGEELPHPKSMLQ 376
           D +F+ +  N    +       +    G  VT   L    + Y+        P  ++ + 
Sbjct: 258 DSNFQMQSENFCSYIFTHAK-TKTLREGILVTGNRLGMLVETYLDAINSGATPCLENAMA 316

Query: 377 ATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAPSDLERKHLDLKEVAIKQFRSV-KKM 435
             A+  N AAV  A + Y + M Q          P+D  ++ LD+  V  ++  +V  + 
Sbjct: 317 VLAQCENSAAVQRAANHYSQQMAQ------QVRFPTDTLQELLDVHAVCEREAIAVFMEY 370

Query: 436 GGDEFCRRYQDQLEAEIEETYANFIKHNDGKNIFY 470
              +  + +Q +L   +E+   +F+  N+  +  Y
Sbjct: 371 SFKDKSQEFQKKLVDTMEKKKEDFVLQNEEASAKY 405


>gi|197333737 guanylate-binding protein 5 [Homo sapiens]
          Length = 586

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 92/389 (23%), Positives = 163/389 (41%), Gaps = 48/389 (12%)

Query: 94  IVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSWIGGNNEPLTGFTWRGGCERETTGIQVW 153
           +VVV++ G +R GKS+L+        NK     + G N+   GF+     +  T GI +W
Sbjct: 38  VVVVAIVGLYRTGKSYLM--------NK-----LAGKNK---GFSVASTVQSHTKGIWIW 81

Query: 154 NEVFVIDRPNGTKVAVLLMDTQGAFD-SQSTIKDCATVFALSTMTSSVQVYNLSQNIQED 212
                +  PN     ++L+DT+G  D  ++  K+   +FAL+ + SS  VYN    I + 
Sbjct: 82  ----CVPHPNWPNHTLVLLDTEGLGDVEKADNKNDIQIFALALLLSSTFVYNTVNKIDQG 137

Query: 213 DLQHLQLFTEYGRLAME------EIYQKP------FQTLMFLIRDWSYPYEHSYGLEGGK 260
            +  L   TE   L         +  + P      F  L++ +RD+    E    L    
Sbjct: 138 AIDLLHNVTELTDLLKARNSPDLDRVEDPADSASFFPDLVWTLRDFCLGLEIDGQLVTPD 197

Query: 261 QFLEKRLQVKQNQHEELQNV---RKHIHNCFSNLGCFL--LPHPGLKVATNPSFDGRLKD 315
           ++LE  L+ KQ   + +QN    R  I   F    CF+  LP    K+A   +      +
Sbjct: 198 EYLENSLRPKQGSDQRVQNFNLPRLCIQKFFPKKKCFIFDLPAHQKKLAQLETLPD--DE 255

Query: 316 IDEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYIKIYQGEELPHPKSML 375
           ++ +F +++      + +  ++ +    G  V    L      Y+      +LP  ++ +
Sbjct: 256 LEPEFVQQVTEFCSYIFS-HSMTKTLPGGIMVNGSRLKNLVLTYVNAISSGDLPCIENAV 314

Query: 376 QATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAPSDLERKHLDLKEVAIKQFRSV-KK 434
            A A+  N AAV  A   Y + M     G K  + P +  ++ LDL   + ++   V  K
Sbjct: 315 LALAQRENSAAVQKAIAHYDQQM-----GQKVQL-PMETLQELLDLHRTSEREAIEVFMK 368

Query: 435 MGGDEFCRRYQDQLEAEIEETYANFIKHN 463
               +  + +Q +LE  ++    +  K N
Sbjct: 369 NSFKDVDQSFQKELETLLDAKQNDICKRN 397


>gi|16418425 guanylate-binding protein 5 [Homo sapiens]
          Length = 586

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 92/389 (23%), Positives = 163/389 (41%), Gaps = 48/389 (12%)

Query: 94  IVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSWIGGNNEPLTGFTWRGGCERETTGIQVW 153
           +VVV++ G +R GKS+L+        NK     + G N+   GF+     +  T GI +W
Sbjct: 38  VVVVAIVGLYRTGKSYLM--------NK-----LAGKNK---GFSVASTVQSHTKGIWIW 81

Query: 154 NEVFVIDRPNGTKVAVLLMDTQGAFD-SQSTIKDCATVFALSTMTSSVQVYNLSQNIQED 212
                +  PN     ++L+DT+G  D  ++  K+   +FAL+ + SS  VYN    I + 
Sbjct: 82  ----CVPHPNWPNHTLVLLDTEGLGDVEKADNKNDIQIFALALLLSSTFVYNTVNKIDQG 137

Query: 213 DLQHLQLFTEYGRLAME------EIYQKP------FQTLMFLIRDWSYPYEHSYGLEGGK 260
            +  L   TE   L         +  + P      F  L++ +RD+    E    L    
Sbjct: 138 AIDLLHNVTELTDLLKARNSPDLDRVEDPADSASFFPDLVWTLRDFCLGLEIDGQLVTPD 197

Query: 261 QFLEKRLQVKQNQHEELQNV---RKHIHNCFSNLGCFL--LPHPGLKVATNPSFDGRLKD 315
           ++LE  L+ KQ   + +QN    R  I   F    CF+  LP    K+A   +      +
Sbjct: 198 EYLENSLRPKQGSDQRVQNFNLPRLCIQKFFPKKKCFIFDLPAHQKKLAQLETLPD--DE 255

Query: 316 IDEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYIKIYQGEELPHPKSML 375
           ++ +F +++      + +  ++ +    G  V    L      Y+      +LP  ++ +
Sbjct: 256 LEPEFVQQVTEFCSYIFS-HSMTKTLPGGIMVNGSRLKNLVLTYVNAISSGDLPCIENAV 314

Query: 376 QATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAPSDLERKHLDLKEVAIKQFRSV-KK 434
            A A+  N AAV  A   Y + M     G K  + P +  ++ LDL   + ++   V  K
Sbjct: 315 LALAQRENSAAVQKAIAHYDQQM-----GQKVQL-PMETLQELLDLHRTSEREAIEVFMK 368

Query: 435 MGGDEFCRRYQDQLEAEIEETYANFIKHN 463
               +  + +Q +LE  ++    +  K N
Sbjct: 369 NSFKDVDQSFQKELETLLDAKQNDICKRN 397


>gi|112382372 guanylate binding protein 3 [Homo sapiens]
          Length = 595

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 92/390 (23%), Positives = 166/390 (42%), Gaps = 50/390 (12%)

Query: 94  IVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSWIGGNNEPLTGFTWRGGCERETTGIQVW 153
           +VVV++ G +R GKS+L+        NK     + G N+   GF+     +  T GI +W
Sbjct: 38  VVVVAIVGLYRTGKSYLM--------NK-----LAGKNK---GFSLGSTVKSHTKGIWMW 81

Query: 154 NEVFVIDRPNGTKVAVLLMDTQGAFD-SQSTIKDCATVFALSTMTSSVQVYNLSQNIQED 212
                +  P   +  ++L+DT+G  D  +   ++ + +F L+ + SS  VYN    I + 
Sbjct: 82  ----CVPHPKKPEHTLVLLDTEGLGDVKKGDNQNDSWIFTLAVLLSSTLVYNSMGTINQQ 137

Query: 213 DLQHLQLFTEYGRLAMEEI------------YQKPFQTLMFLIRDWSYPYEHSYGLEGGK 260
            +  L   TE       +             +   F   ++ +RD+S   E         
Sbjct: 138 AMDQLYYVTELTHRIRSKSSPDENENEDSADFVSFFPDFVWTLRDFSLDLEADGQPLTPD 197

Query: 261 QFLEKRLQVKQNQHEELQNV---RKHIHNCFSNLGCFL--LPHPGLKVATNPSFDGRLKD 315
           ++LE  L++ Q   ++ +N    R  I   F    CF+  LP    K+A         ++
Sbjct: 198 EYLEYSLKLTQGTSQKDKNFNLPRLCIRKFFPKKKCFVFDLPIHRRKLAQLEKLQD--EE 255

Query: 316 IDEDFKRELRNLVPLLLAPENLVEKEISGS-KVTCRDLVEYFKAYIKIYQGEELPHPKSM 374
           +D +F +++ +    + +  N   K +SG  KV    L      YI      +LP  ++ 
Sbjct: 256 LDPEFVQQVADFCSYIFS--NSKTKTLSGGIKVNGPRLESLVLTYINAISRGDLPCMENA 313

Query: 375 LQATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAPSDLERKHLDLKEVAIKQFRSV-K 433
           + A A+  N AAV  A   Y + M     G K  + P++  ++ LDL  V+ ++   V  
Sbjct: 314 VLALAQIENSAAVQKAIAHYDQQM-----GQKVQL-PAETLQELLDLHRVSEREATEVYM 367

Query: 434 KMGGDEFCRRYQDQLEAEIEETYANFIKHN 463
           K    +    +Q +L A++++   +F K N
Sbjct: 368 KNSFKDVDHLFQKKLAAQLDKKRDDFCKQN 397


>gi|38327558 guanylate binding protein 2, interferon-inducible [Homo
           sapiens]
          Length = 591

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 87/387 (22%), Positives = 160/387 (41%), Gaps = 44/387 (11%)

Query: 94  IVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSWIGGNNEPLTGFTWRGGCERETTGIQVW 153
           +VVV++ G +R GKS+L++ +             G  N    GF+     +  T GI +W
Sbjct: 38  VVVVAIVGLYRTGKSYLMNKL------------AGKKN----GFSLGSTVKSHTKGIWMW 81

Query: 154 NEVFVIDRPNGTKVAVLLMDTQGAFD-SQSTIKDCATVFALSTMTSSVQVYNLSQNIQED 212
                +  P   +  ++L+DT+G  D  +   ++ + +FAL+ + SS  VYN    I + 
Sbjct: 82  ----CVPHPKKPEHTLVLLDTEGLGDIEKGDNENDSWIFALAILLSSTFVYNSMGTINQQ 137

Query: 213 DLQHLQLFTEY----------GRLAMEEI--YQKPFQTLMFLIRDWSYPYEHSYGLEGGK 260
            +  L   TE           G  ++++   +   F   ++ +RD++   E         
Sbjct: 138 AMDQLHYVTELTDRIKANSSPGNNSVDDSADFVSFFPAFVWTLRDFTLELEVDGEPITAD 197

Query: 261 QFLEKRLQVKQ---NQHEELQNVRKHIHNCFSNLGCFLLPHPGLKVATNPSFDGRLKDID 317
            +LE  L++++    + +   + R  I   F    CF+   P  K         + ++++
Sbjct: 198 DYLELSLKLRKGTDKKSKSFNDPRLCIRKFFPKRKCFVFDWPAPKKYLAHLEQLKEEELN 257

Query: 318 EDFKRELRNLVPLLLAPENLVEKEISGS-KVTCRDLVEYFKAYIKIYQGEELPHPKSMLQ 376
            DF  ++      +L+  N+  K +SG   V    L      Y+      +LP  ++ + 
Sbjct: 258 PDFIEQVAEFCSYILSHSNV--KTLSGGIPVNGPRLESLVLTYVNAISSGDLPCMENAVL 315

Query: 377 ATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAPSDLERKHLDLKEVAIKQFRSVKKMG 436
           A A+  N AAV  A   Y + M Q      P     +L   H D +  AI+ F    K  
Sbjct: 316 ALAQIENSAAVEKAIAHYEQQMGQKV--QLPTETLQELLDLHRDSEREAIEVF---MKNS 370

Query: 437 GDEFCRRYQDQLEAEIEETYANFIKHN 463
             +  + +Q +L A++E    +F K N
Sbjct: 371 FKDVDQMFQRKLGAQLEARRDDFCKQN 397


>gi|157671915 guanylate binding protein family, member 6 [Homo
           sapiens]
          Length = 633

 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 82/349 (23%), Positives = 141/349 (40%), Gaps = 44/349 (12%)

Query: 75  LDEEALEQILL-QEHIRDLN-----IVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSWIG 128
           L E   EQ+L+ Q+ I+ L      +VVV++ G +R GKS+L++ +              
Sbjct: 13  LVENNNEQLLVNQQAIQILEKISQPVVVVAIVGLYRTGKSYLMNHL-------------A 59

Query: 129 GNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFD-SQSTIKDC 187
           G N    GF      + ET GI +W     +  P+     ++L+DT+G  D  +   K+ 
Sbjct: 60  GQNH---GFPLGSTVQSETKGIWMW----CVPHPSKPNHTLVLLDTEGLGDVEKGDPKND 112

Query: 188 ATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKP------------ 235
           + +FAL+ +  S  VYN    I    L+ L   TE   L   +   +P            
Sbjct: 113 SWIFALAVLLCSTFVYNSMSTINHQALEQLHYVTELTELIKAKSSPRPDGVEDSTEFVSF 172

Query: 236 FQTLMFLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEELQN---VRKHIHNCFSNLG 292
           F   ++ +RD++   + +       ++LE  L++ Q  +  +Q     R+ I   F    
Sbjct: 173 FPDFLWTVRDFTLELKLNGHPITEDEYLENALKLIQGNNPRVQTSNFPRECIRRFFPKRK 232

Query: 293 CFLLPHPGLKVATNPSFDG-RLKDIDEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRD 351
           CF+   P        + +    K +D  F +E  N+    +      +    G  VT   
Sbjct: 233 CFVFDRPTNDKDLLANIEKVSEKQLDPKF-QEQTNIFCSYIFTHARTKTLREGITVTGNR 291

Query: 352 LVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAGARDTYCKSMEQ 400
           L      Y++      +P  ++ +   A+  N AAV  A D Y + M Q
Sbjct: 292 LGTLAVTYVEAINSGAVPCLENAVITLAQRENSAAVQRAADYYSQQMAQ 340


>gi|166706903 guanylate binding protein 1, interferon-inducible,
           67kDa [Homo sapiens]
          Length = 592

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 91/390 (23%), Positives = 162/390 (41%), Gaps = 48/390 (12%)

Query: 94  IVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSWIGGNNEPLTGFTWRGGCERETTGIQVW 153
           +VVV++ G +R GKS+L+        NK     + G  +   GF+     +  T GI +W
Sbjct: 38  MVVVAIVGLYRTGKSYLM--------NK-----LAGKKK---GFSLGSTVQSHTKGIWMW 81

Query: 154 NEVFVIDRPNGTKVAVLLMDTQGAFD-SQSTIKDCATVFALSTMTSSVQVYNLSQNIQED 212
                +  P      ++L+DT+G  D  +   ++ + +FAL+ + SS  VYN    I + 
Sbjct: 82  ----CVPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAVLLSSTFVYNSIGTINQQ 137

Query: 213 DLQHLQLFTEY--------------GRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEG 258
            +  L   TE                 +     +   F   ++ +RD+S   E       
Sbjct: 138 AMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVWTLRDFSLDLEADGQPLT 197

Query: 259 GKQFLEKRLQVKQ--NQHEELQNV-RKHIHNCFSNLGCFLLPHPGLKVATNPSFDGRLKD 315
             ++L   L++K+  +Q +E  N+ R  I   F    CF+   P  +         + ++
Sbjct: 198 PDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDRPVHRRKLAQLEKLQDEE 257

Query: 316 IDEDFKRELRNLVPLLLAPENLVEKEISGS-KVTCRDLVEYFKAYIKIYQGEELPHPKSM 374
           +D +F +++ +    + +  N   K +SG  +V    L      Y+      +LP  ++ 
Sbjct: 258 LDPEFVQQVADFCSYIFS--NSKTKTLSGGIQVNGPRLESLVLTYVNAISSGDLPCMENA 315

Query: 375 LQATAEANNLAAVAGARDTYCKSMEQVCGGDKPYIAPSDLERKHLDLKEVAIKQF-RSVK 433
           + A A+  N AAV  A   Y + M Q      P     +L   H D +  AI+ F RS  
Sbjct: 316 VLALAQIENSAAVQKAIAHYEQQMGQKV--QLPTETLQELLDLHRDSEREAIEVFIRSSF 373

Query: 434 KMGGDEFCRRYQDQLEAEIEETYANFIKHN 463
           K    +    +Q +L A++E+   +F K N
Sbjct: 374 K----DVDHLFQKELAAQLEKKRDDFCKQN 399


>gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]
          Length = 625

 Score = 36.2 bits (82), Expect = 0.086
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 224 GRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEELQNVRKH 283
           G++  E+   +  +TL   + +        + ++G K + E+RL+  + + EELQ+VR  
Sbjct: 436 GQIREEKARTRELETLQQTVEELQ---AQVHSMDGAKGWFERRLKEAEGKEEELQDVRDQ 492

Query: 284 IHNCFSNLGCFLLPHPGLKVATNPSFDGR 312
           +        C L     LK     + DG+
Sbjct: 493 LEQAQEERDCHLKTISSLKQEVKDTVDGQ 521


>gi|4758942 septin 4 isoform 1 [Homo sapiens]
          Length = 478

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 309 FDGRLKDIDEDFKRELR---NLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYIKIYQ 364
           F   L+ +D +F + L    N+VP+L   + L   E+   K   R+ +E+F   IKIYQ
Sbjct: 263 FGHGLRPLDVEFMKALHQRVNIVPILAKADTLTPPEVDHKKRKIREEIEHFG--IKIYQ 319


>gi|17986247 septin 4 isoform 3 [Homo sapiens]
          Length = 459

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 309 FDGRLKDIDEDFKRELR---NLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYIKIYQ 364
           F   L+ +D +F + L    N+VP+L   + L   E+   K   R+ +E+F   IKIYQ
Sbjct: 244 FGHGLRPLDVEFMKALHQRVNIVPILAKADTLTPPEVDHKKRKIREEIEHFG--IKIYQ 300


>gi|22748667 Na+/K+ -ATPase alpha 3 subunit [Homo sapiens]
          Length = 1013

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 10/98 (10%)

Query: 415 ERKHLD--LKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEETYANFIKHNDGKNIFYAA 472
           ER+ LD   KEVA+ +     KM  +E CR+Y       +  + A  I   DG N     
Sbjct: 18  ERRDLDDLKKEVAMTEH----KMSVEEVCRKYNTDCVQGLTHSKAQEILARDGPNAL--T 71

Query: 473 RTPATLFAVMFAMYIISGLTGFIGLNSIAVLCNLVMGL 510
             P T   V F   +  G +  + +   A+LC L  G+
Sbjct: 72  PPPTTPEWVKFCRQLFGGFSILLWIG--AILCFLAYGI 107


>gi|58331187 T-cell lymphoma invasion and metastasis 2 isoform a
           [Homo sapiens]
          Length = 1701

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 357 KAYIKIYQGEELPHPKSMLQATAEANNLA 385
           + Y+   QG ELP+PKS+L A +  + LA
Sbjct: 695 RCYLASLQGGELPNPKSLLAAASRPSKLA 723


>gi|32967591 phosducin isoform a [Homo sapiens]
          Length = 246

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 16/107 (14%)

Query: 199 SVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEG 258
           S+Q Y L    +ED+        +Y R  M++++QK    L F  R     Y   Y LE 
Sbjct: 73  SIQEYELIHKEKEDE----NCLRKYRRQCMQDMHQK----LSFGPR-----YGFVYELET 119

Query: 259 GKQFL---EKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPGLK 302
           GKQFL   EK L++        ++  K      S+L C    +P +K
Sbjct: 120 GKQFLETIEKELKITTIVVHIYEDGIKGCDALNSSLTCLAAEYPIVK 166


>gi|12408668 phosducin isoform b [Homo sapiens]
          Length = 194

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 16/107 (14%)

Query: 199 SVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEG 258
           S+Q Y L    +ED+        +Y R  M++++QK    L F  R     Y   Y LE 
Sbjct: 21  SIQEYELIHKEKEDE----NCLRKYRRQCMQDMHQK----LSFGPR-----YGFVYELET 67

Query: 259 GKQFL---EKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPGLK 302
           GKQFL   EK L++        ++  K      S+L C    +P +K
Sbjct: 68  GKQFLETIEKELKITTIVVHIYEDGIKGCDALNSSLTCLAAEYPIVK 114


>gi|115511020 Smg-6 homolog, nonsense mediated mRNA decay factor [Homo
            sapiens]
          Length = 1419

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 25/163 (15%)

Query: 306  NPSFDGRLKDIDEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRDL--VEYFKAYIKIY 363
            +P  D  L  ++ED  R L   VPLL AP++    E +  KV   D   V   K +++  
Sbjct: 1081 DPDDDLTLLILEED--RLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEAL 1138

Query: 364  QGEELPHPKSMLQATAEANNLAAVAGARDTYCKSMEQVCG----GDKPYIAPSDLERK-- 417
             G+E P          +     +VA   DT  K M    G     ++  +   D E    
Sbjct: 1139 CGQEEP------LLAFKGGKYVSVAPVPDTMGKEMGSQEGTRLEDEEEDVVIEDFEEDSE 1192

Query: 418  ------HLDLKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEE 454
                    D++E+  K+    +K+   +   R Q++++A +E+
Sbjct: 1193 AEGSGGEDDIRELRAKKLALARKIAEQQ---RRQEKIQAVLED 1232


>gi|23510381 transportin 1 isoform 2 [Homo sapiens]
          Length = 890

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 402 CGGDKPYIAPSDLERKHLDLKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEETYANF 459
           C     +I P D      DL+++  K     K   GDE  RR+ DQ    ++E  A F
Sbjct: 836 CDAVASWINPKD------DLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAF 887


>gi|133925811 transportin 1 isoform 1 [Homo sapiens]
          Length = 898

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 402 CGGDKPYIAPSDLERKHLDLKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEETYANF 459
           C     +I P D      DL+++  K     K   GDE  RR+ DQ    ++E  A F
Sbjct: 844 CDAVASWINPKD------DLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAF 895


>gi|164519084 RAB GTPase activating protein 1 [Homo sapiens]
          Length = 1069

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 3/75 (4%)

Query: 438 DEFCRRYQDQ--LEAEIEETYANFIKHNDGKNIFYAARTPATLFAVMFAMYIISGLTGFI 495
           D  C+ YQ +  ++  I + Y +F+  +   ++ YA++   TLF   F +Y++  +   +
Sbjct: 690 DLHCKFYQLERLMQEYIPDLYNHFLDISLEAHM-YASQWFLTLFTAKFPLYMVFHIIDLL 748

Query: 496 GLNSIAVLCNLVMGL 510
               I+V+ N+ +GL
Sbjct: 749 LCEGISVIFNVALGL 763


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,643,742
Number of Sequences: 37866
Number of extensions: 955190
Number of successful extensions: 2430
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2391
Number of HSP's gapped (non-prelim): 31
length of query: 583
length of database: 18,247,518
effective HSP length: 108
effective length of query: 475
effective length of database: 14,157,990
effective search space: 6725045250
effective search space used: 6725045250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.