Guide to the Human Genome
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Name: TGFB2 Sequence: fasta or formatted (442aa) NCBI GI: 208022653
Description:

transforming growth factor, beta 2 isoform 1

Referenced in:

TGF-beta Family

Other entries for this name:
alt prot [414aa] transforming growth factor, beta 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         25           3
 C cysteine            4.1         18           2
 D aspartate           4.8         21           1
 E glutamate           6.3         28           2
 F phenylalanine       3.6         16           2
 G glycine             3.2         14           1
 H histidine           2.0          9           2
 I isoleucine          5.4         24           2
 K lysine              6.8         30           2
 L leucine             9.5         42           3
 M methionine          1.6          7           1
 N asparagine          3.8         17           2
 P proline             6.6         29           2
 Q glutamine           3.6         16           2
 R arginine            6.6         29           2
 S serine              9.3         41           2
 T threonine           5.7         25           2
 V valine              5.7         25           2
 W tryptophan          1.1          5           1
 Y tyrosine            4.8         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transforming growth factor, beta 2 isoform 1 
TGFB2                 0.916   transforming growth factor, beta 2 isoform 2 
TGFB3                 0.482   transforming growth factor, beta 3 
TGFB1                 0.312   transforming growth factor, beta 1 
BMP7                  0.086   bone morphogenetic protein 7 precursor 
GDF11                 0.081   growth differentiation factor 11 precursor 
MSTN                  0.078   myostatin 
BMP6                  0.077   bone morphogenetic protein 6 preproprotein 
BMP2                  0.072   bone morphogenetic protein 2 preproprotein 
INHBA                 0.071   inhibin beta A precursor 
BMP5                  0.070   bone morphogenetic protein 5 preproprotein 
BMP4                  0.070   bone morphogenetic protein 4 preproprotein 
BMP4                  0.070   bone morphogenetic protein 4 preproprotein 
BMP4                  0.070   bone morphogenetic protein 4 preproprotein 
BMP8B                 0.070   bone morphogenetic protein 8B preproprotein 
BMP8A                 0.070   bone morphogenetic protein 8A 
BMP10                 0.067   bone morphogenetic protein 10 preproprotein 
INHBE                 0.057   activin beta E 
GDF7                  0.054   growth differentiation factor 7 preproprotein 
GDF6                  0.050   growth differentiation factor 6 precursor 
GDF5                  0.050   growth differentiation factor 5 preproprotein 
BMP3                  0.046   bone morphogenetic protein 3 preproprotein 
INHBC                 0.046   inhibin beta C chain preproprotein 
INHBB                 0.043   inhibin beta B subunit preproprotein 
GDF15                 0.042   growth differentiation factor 15 
LOC100292463          0.042   PREDICTED: similar to growth differentiation factor...
GDF1                  0.042   growth differentiation factor 1 
GDF3                  0.040   growth differentiation factor 3 precursor 
NODAL                 0.034   nodal precursor 
GDF2                  0.031   growth differentiation factor 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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