Guide to the Human Genome
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Name: BMP4 Sequence: fasta or formatted (408aa) NCBI GI: 157276593
Description:

bone morphogenetic protein 4 preproprotein

Referenced in:

Stem Cells and Early Development
TGF-beta Family

Other entries for this name:
alt mRNA [408aa] bone morphogenetic protein 4 preproprotein
alt mRNA [408aa] bone morphogenetic protein 4 preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         23           1
 C cysteine            2.0          8           2
 D aspartate           3.7         15           1
 E glutamate           7.1         29           5
 F phenylalanine       3.2         13           1
 G glycine             6.6         27           2
 H histidine           5.6         23           2
 I isoleucine          4.2         17           1
 K lysine              3.4         14           3
 L leucine             9.6         39           2
 M methionine          2.0          8           1
 N asparagine          4.4         18           1
 P proline             5.9         24           2
 Q glutamine           4.7         19           1
 R arginine            9.1         37           4
 S serine              7.4         30           2
 T threonine           4.4         18           1
 V valine              7.1         29           2
 W tryptophan          1.5          6           1
 Y tyrosine            2.7         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bone morphogenetic protein 4 preproprotein 
BMP4                  1.000   bone morphogenetic protein 4 preproprotein 
BMP4                  1.000   bone morphogenetic protein 4 preproprotein 
BMP2                  0.560   bone morphogenetic protein 2 preproprotein 
BMP7                  0.200   bone morphogenetic protein 7 precursor 
BMP6                  0.195   bone morphogenetic protein 6 preproprotein 
BMP5                  0.185   bone morphogenetic protein 5 preproprotein 
BMP8B                 0.182   bone morphogenetic protein 8B preproprotein 
BMP8A                 0.182   bone morphogenetic protein 8A 
BMP10                 0.156   bone morphogenetic protein 10 preproprotein 
GDF5                  0.155   growth differentiation factor 5 preproprotein 
GDF3                  0.152   growth differentiation factor 3 precursor 
GDF7                  0.152   growth differentiation factor 7 preproprotein 
GDF2                  0.146   growth differentiation factor 2 
GDF6                  0.144   growth differentiation factor 6 precursor 
BMP3                  0.115   bone morphogenetic protein 3 preproprotein 
GDF10                 0.106   growth differentiation factor 10 precursor 
NODAL                 0.096   nodal precursor 
INHBA                 0.094   inhibin beta A precursor 
BMP15                 0.094   bone morphogenetic protein 15 precursor 
GDF1                  0.091   growth differentiation factor 1 
TGFB3                 0.088   transforming growth factor, beta 3 
INHBE                 0.087   activin beta E 
INHBB                 0.085   inhibin beta B subunit preproprotein 
TGFB2                 0.076   transforming growth factor, beta 2 isoform 1 
GDF11                 0.073   growth differentiation factor 11 precursor 
GDF9                  0.073   growth differentiation factor 9 precursor 
MSTN                  0.073   myostatin 
TGFB2                 0.073   transforming growth factor, beta 2 isoform 2 
INHBC                 0.071   inhibin beta C chain preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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