Guide to the Human Genome
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Name: BMP8B Sequence: fasta or formatted (402aa) NCBI GI: 29571106
Description:

bone morphogenetic protein 8B preproprotein

Referenced in:

TGF-beta Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         37           2
 C cysteine            2.7         11           2
 D aspartate           6.0         24           3
 E glutamate           4.5         18           1
 F phenylalanine       3.5         14           2
 G glycine             7.5         30           4
 H histidine           3.5         14           1
 I isoleucine          2.2          9           1
 K lysine              2.5         10           2
 L leucine            12.4         50           2
 M methionine          2.5         10           2
 N asparagine          2.5         10           2
 P proline             8.2         33           3
 Q glutamine           4.2         17           2
 R arginine            9.5         38           3
 S serine              5.7         23           2
 T threonine           3.0         12           1
 V valine              6.7         27           2
 W tryptophan          1.5          6           1
 Y tyrosine            2.2          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bone morphogenetic protein 8B preproprotein 
BMP8A                 0.981   bone morphogenetic protein 8A 
BMP5                  0.467   bone morphogenetic protein 5 preproprotein 
BMP7                  0.455   bone morphogenetic protein 7 precursor 
BMP6                  0.440   bone morphogenetic protein 6 preproprotein 
BMP4                  0.185   bone morphogenetic protein 4 preproprotein 
BMP4                  0.185   bone morphogenetic protein 4 preproprotein 
BMP4                  0.185   bone morphogenetic protein 4 preproprotein 
BMP2                  0.181   bone morphogenetic protein 2 preproprotein 
GDF7                  0.146   growth differentiation factor 7 preproprotein 
GDF5                  0.140   growth differentiation factor 5 preproprotein 
GDF6                  0.139   growth differentiation factor 6 precursor 
GDF3                  0.124   growth differentiation factor 3 precursor 
BMP10                 0.123   bone morphogenetic protein 10 preproprotein 
GDF2                  0.121   growth differentiation factor 2 
GDF1                  0.113   growth differentiation factor 1 
BMP3                  0.110   bone morphogenetic protein 3 preproprotein 
GDF10                 0.105   growth differentiation factor 10 precursor 
NODAL                 0.100   nodal precursor 
INHBA                 0.097   inhibin beta A precursor 
BMP15                 0.084   bone morphogenetic protein 15 precursor 
MSTN                  0.077   myostatin 
TGFB2                 0.077   transforming growth factor, beta 2 isoform 1 
TGFB2                 0.077   transforming growth factor, beta 2 isoform 2 
INHBE                 0.076   activin beta E 
INHBB                 0.076   inhibin beta B subunit preproprotein 
TGFB3                 0.072   transforming growth factor, beta 3 
INHBC                 0.068   inhibin beta C chain preproprotein 
GDF11                 0.067   growth differentiation factor 11 precursor 
GDF9                  0.062   growth differentiation factor 9 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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