Guide to the Human Genome
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Name: BMP3 Sequence: fasta or formatted (472aa) NCBI GI: 126507087
Description:

bone morphogenetic protein 3 preproprotein

Referenced in:

TGF-beta Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         32           4
 C cysteine            2.5         12           2
 D aspartate           3.4         16           1
 E glutamate           6.4         30           2
 F phenylalanine       3.6         17           2
 G glycine             5.9         28           3
 H histidine           2.1         10           2
 I isoleucine          4.7         22           2
 K lysine              7.8         37           3
 L leucine             9.7         46           2
 M methionine          1.5          7           1
 N asparagine          3.6         17           2
 P proline             7.0         33           2
 Q glutamine           4.9         23           1
 R arginine            7.4         35           2
 S serine              9.1         43           2
 T threonine           4.0         19           1
 V valine              4.9         23           2
 W tryptophan          1.9          9           1
 Y tyrosine            2.8         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bone morphogenetic protein 3 preproprotein 
GDF10                 0.337   growth differentiation factor 10 precursor 
BMP6                  0.101   bone morphogenetic protein 6 preproprotein 
BMP4                  0.100   bone morphogenetic protein 4 preproprotein 
BMP4                  0.100   bone morphogenetic protein 4 preproprotein 
BMP4                  0.100   bone morphogenetic protein 4 preproprotein 
BMP2                  0.100   bone morphogenetic protein 2 preproprotein 
BMP5                  0.098   bone morphogenetic protein 5 preproprotein 
GDF5                  0.096   growth differentiation factor 5 preproprotein 
GDF6                  0.096   growth differentiation factor 6 precursor 
BMP8B                 0.095   bone morphogenetic protein 8B preproprotein 
BMP7                  0.094   bone morphogenetic protein 7 precursor 
GDF7                  0.094   growth differentiation factor 7 preproprotein 
BMP8A                 0.094   bone morphogenetic protein 8A 
GDF3                  0.083   growth differentiation factor 3 precursor 
GDF1                  0.077   growth differentiation factor 1 
GDF2                  0.073   growth differentiation factor 2 
BMP10                 0.070   bone morphogenetic protein 10 preproprotein 
INHBB                 0.068   inhibin beta B subunit preproprotein 
NODAL                 0.065   nodal precursor 
INHBA                 0.063   inhibin beta A precursor 
BMP15                 0.063   bone morphogenetic protein 15 precursor 
GDF9                  0.061   growth differentiation factor 9 precursor 
INHBE                 0.060   activin beta E 
GDF11                 0.056   growth differentiation factor 11 precursor 
MSTN                  0.054   myostatin 
INHBC                 0.053   inhibin beta C chain preproprotein 
TGFB2                 0.044   transforming growth factor, beta 2 isoform 1 
TGFB2                 0.041   transforming growth factor, beta 2 isoform 2 
INHA                  0.038   inhibin alpha subunit precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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