Guide to the Human Genome
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Name: TGFB2 Sequence: fasta or formatted (414aa) NCBI GI: 4507463
Description:

transforming growth factor, beta 2 isoform 2

Referenced in:

TGF-beta Family

Other entries for this name:
alt prot [442aa] transforming growth factor, beta 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         25           3
 C cysteine            3.6         15           2
 D aspartate           4.8         20           1
 E glutamate           6.8         28           2
 F phenylalanine       3.9         16           2
 G glycine             2.7         11           1
 H histidine           2.2          9           2
 I isoleucine          5.8         24           2
 K lysine              7.2         30           2
 L leucine             9.4         39           3
 M methionine          1.7          7           1
 N asparagine          4.3         18           2
 P proline             6.5         27           2
 Q glutamine           3.4         14           2
 R arginine            6.8         28           2
 S serine              8.7         36           2
 T threonine           5.3         22           1
 V valine              4.8         20           2
 W tryptophan          1.2          5           1
 Y tyrosine            4.8         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transforming growth factor, beta 2 isoform 2 
TGFB2                 0.979   transforming growth factor, beta 2 isoform 1 
TGFB3                 0.527   transforming growth factor, beta 3 
TGFB1                 0.348   transforming growth factor, beta 1 
MSTN                  0.093   myostatin 
BMP7                  0.092   bone morphogenetic protein 7 precursor 
GDF11                 0.089   growth differentiation factor 11 precursor 
BMP6                  0.082   bone morphogenetic protein 6 preproprotein 
BMP2                  0.077   bone morphogenetic protein 2 preproprotein 
INHBA                 0.076   inhibin beta A precursor 
BMP10                 0.076   bone morphogenetic protein 10 preproprotein 
BMP5                  0.075   bone morphogenetic protein 5 preproprotein 
BMP8B                 0.075   bone morphogenetic protein 8B preproprotein 
BMP8A                 0.075   bone morphogenetic protein 8A 
BMP4                  0.073   bone morphogenetic protein 4 preproprotein 
BMP4                  0.073   bone morphogenetic protein 4 preproprotein 
BMP4                  0.073   bone morphogenetic protein 4 preproprotein 
INHBE                 0.060   activin beta E 
GDF7                  0.058   growth differentiation factor 7 preproprotein 
GDF6                  0.053   growth differentiation factor 6 precursor 
GDF5                  0.053   growth differentiation factor 5 preproprotein 
INHBC                 0.050   inhibin beta C chain preproprotein 
BMP3                  0.047   bone morphogenetic protein 3 preproprotein 
INHBB                 0.046   inhibin beta B subunit preproprotein 
GDF15                 0.045   growth differentiation factor 15 
LOC100292463          0.045   PREDICTED: similar to growth differentiation factor...
GDF1                  0.045   growth differentiation factor 1 
GDF3                  0.042   growth differentiation factor 3 precursor 
GDF2                  0.037   growth differentiation factor 2 
NODAL                 0.036   nodal precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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