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Search of human proteins with 205830434
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|205830434 D4, zinc and double PHD fingers family 1 isoform c
[Homo sapiens]
(332 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|205830434 D4, zinc and double PHD fingers family 1 isoform c ... 720 0.0
gi|205830430 D4, zinc and double PHD fingers family 1 isoform a ... 720 0.0
gi|205830432 D4, zinc and double PHD fingers family 1 isoform b ... 592 e-169
gi|5454004 D4, zinc and double PHD fingers family 2 [Homo sapiens] 396 e-110
gi|148762958 D4, zinc and double PHD fingers, family 3 [Homo sap... 293 1e-79
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 137 1e-32
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 137 1e-32
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 137 1e-32
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 134 1e-31
gi|194328736 PHD finger protein 10 isoform b [Homo sapiens] 124 1e-28
gi|194328734 PHD finger protein 10 isoform a [Homo sapiens] 124 1e-28
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 96 4e-20
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 93 4e-19
gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [H... 67 2e-11
gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Ho... 67 2e-11
gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [H... 67 2e-11
gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [H... 66 5e-11
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H... 66 5e-11
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa... 65 8e-11
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa... 65 8e-11
gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens] 65 1e-10
gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive ... 65 1e-10
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 65 1e-10
gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo... 63 3e-10
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 61 1e-09
gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo... 59 8e-09
gi|115430235 ubiquitin-like with PHD and ring finger domains 1 i... 58 1e-08
gi|115430233 ubiquitin-like with PHD and ring finger domains 1 i... 58 1e-08
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 56 5e-08
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 55 7e-08
>gi|205830434 D4, zinc and double PHD fingers family 1 isoform c
[Homo sapiens]
Length = 332
Score = 720 bits (1858), Expect = 0.0
Identities = 332/332 (100%), Positives = 332/332 (100%)
Query: 1 MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGP 60
MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGP
Sbjct: 1 MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGP 60
Query: 61 VLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYG 120
VLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYG
Sbjct: 61 VLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYG 120
Query: 121 IGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEENAERHALPF 180
IGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEENAERHALPF
Sbjct: 121 IGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEENAERHALPF 180
Query: 181 HRKNNHKQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCAD 240
HRKNNHKQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCAD
Sbjct: 181 HRKNNHKQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCAD 240
Query: 241 CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCL 300
CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCL
Sbjct: 241 CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCL 300
Query: 301 SPPMAEPPEGSWSCHLCLRHLKEKASAYITLT 332
SPPMAEPPEGSWSCHLCLRHLKEKASAYITLT
Sbjct: 301 SPPMAEPPEGSWSCHLCLRHLKEKASAYITLT 332
>gi|205830430 D4, zinc and double PHD fingers family 1 isoform a
[Homo sapiens]
Length = 414
Score = 720 bits (1858), Expect = 0.0
Identities = 332/332 (100%), Positives = 332/332 (100%)
Query: 1 MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGP 60
MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGP
Sbjct: 83 MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGP 142
Query: 61 VLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYG 120
VLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYG
Sbjct: 143 VLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYG 202
Query: 121 IGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEENAERHALPF 180
IGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEENAERHALPF
Sbjct: 203 IGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEENAERHALPF 262
Query: 181 HRKNNHKQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCAD 240
HRKNNHKQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCAD
Sbjct: 263 HRKNNHKQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCAD 322
Query: 241 CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCL 300
CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCL
Sbjct: 323 CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCL 382
Query: 301 SPPMAEPPEGSWSCHLCLRHLKEKASAYITLT 332
SPPMAEPPEGSWSCHLCLRHLKEKASAYITLT
Sbjct: 383 SPPMAEPPEGSWSCHLCLRHLKEKASAYITLT 414
>gi|205830432 D4, zinc and double PHD fingers family 1 isoform b
[Homo sapiens]
Length = 380
Score = 592 bits (1526), Expect = e-169
Identities = 287/342 (83%), Positives = 288/342 (84%), Gaps = 54/342 (15%)
Query: 1 MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGP 60
MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGP
Sbjct: 83 MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGP 142
Query: 61 VLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYG 120
VLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYG
Sbjct: 143 VLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYG 202
Query: 121 IGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEENAERHALPF 180
IGGLRKRQDTASLEDRDKPYVCD
Sbjct: 203 IGGLRKRQDTASLEDRDKPYVCD------------------------------------- 225
Query: 181 HRKNNHKQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCAD 240
+FYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCAD
Sbjct: 226 -------KFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCAD 278
Query: 241 CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSEND----------DQLLFCDD 290
CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSEND DQLLFCDD
Sbjct: 279 CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDD 338
Query: 291 CDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAYITLT 332
CDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAYITLT
Sbjct: 339 CDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAYITLT 380
>gi|5454004 D4, zinc and double PHD fingers family 2 [Homo sapiens]
Length = 391
Score = 396 bits (1017), Expect = e-110
Identities = 200/344 (58%), Positives = 236/344 (68%), Gaps = 31/344 (9%)
Query: 1 MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPE-G 59
MEK HRGPGLA GQ+Y+YPAR WRKKRR + EDPRL K D + LKKEG + + G
Sbjct: 57 MEKRHRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDG 116
Query: 60 PVLEALLCAETGEKK---------IELKEEETIMDCQKQQLLE---FPHDLEVEDLEDDI 107
LEALL + EK+ L E ++++LE F DL+ ED E+D
Sbjct: 117 SSLEALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDT 176
Query: 108 PRRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEE 167
P+R+ + K K G+G RK+ D + LEDRDKPY CDICGKRYKNRPGLSYHY H+HLAEE
Sbjct: 177 PKRRGKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE 236
Query: 168 EGEENAERHALPFHRKNNHKQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSK 227
EGE+ K+ + V + + +KK PDG +PN YCDFCLG SK
Sbjct: 237 EGED---------------KEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSK 281
Query: 228 ---KTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQ 284
KTG PE+L+SC+DCGRSGHPSCLQFT M AAV+TYRWQCIECK C++CGTSENDDQ
Sbjct: 282 INKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQ 341
Query: 285 LLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAY 328
LLFCDDCDRGYHMYCL+P M+EPPEGSWSCHLCL LKEKAS Y
Sbjct: 342 LLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIY 385
>gi|148762958 D4, zinc and double PHD fingers, family 3 [Homo
sapiens]
Length = 357
Score = 293 bits (750), Expect = 1e-79
Identities = 151/255 (59%), Positives = 178/255 (69%), Gaps = 28/255 (10%)
Query: 1 MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGP 60
MEK HRGPGLAPGQ+YTYPARCWRKKRRL+ EDP+LR E K + E PLKK+G E
Sbjct: 57 MEKRHRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSEST 116
Query: 61 VLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDLEV----EDLEDDIPRRKNRAKG 116
LEALL E EKK++ +EEE+I + Q+ +LE ++E EDLE+DIP+RKNR +G
Sbjct: 117 TLEALLRGEGVEKKVDAREEESIQEIQR--VLENDENVEEGNEEEDLEEDIPKRKNRTRG 174
Query: 117 KAYGIGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEE--NAE 174
+A G G R+R D AS ED DKPYVCDICGKRYKNRPGLSYHY HTHLA EEG+E + E
Sbjct: 175 RARGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEAQDQE 234
Query: 175 RHALPFHRKNNHKQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGS---KKTGC 231
+ P HR NH+ +K PDGTVIPN YCDFCLGGS KK+G
Sbjct: 235 TRSPPNHRNENHR-----------------PQKGPDGTVIPNNYCDFCLGGSNMNKKSGR 277
Query: 232 PEDLISCADCGRSGH 246
PE+L+SCADCGRS H
Sbjct: 278 PEELVSCADCGRSAH 292
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 137 bits (345), Expect = 1e-32
Identities = 68/151 (45%), Positives = 88/151 (58%), Gaps = 10/151 (6%)
Query: 187 KQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTG--CPEDLISCADCGRS 244
K+ + L+ +P K P IP C FCLG ++ PE+LISCADCG S
Sbjct: 179 KESCESLSCLPPVSLLPHEKDKPVAEPIP--ICSFCLGTKEQNREKKPEELISCADCGNS 236
Query: 245 GHPSCLQFTVNMTAAVRTYRWQCIECKSCSLC-GTSENDDQLLFCDDCDRGYHMYCLSPP 303
GHPSCL+F+ +T V+ RWQCIECK+CS C +N D +LFCD CDRG+HM C PP
Sbjct: 237 GHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPP 296
Query: 304 MAEPPEGSWSCHLCL-----RHLKEKASAYI 329
+ P+G W C +C R L +K +A I
Sbjct: 297 LTRMPKGMWICQICRPRKKGRKLLQKKAAQI 327
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 137 bits (345), Expect = 1e-32
Identities = 68/151 (45%), Positives = 88/151 (58%), Gaps = 10/151 (6%)
Query: 187 KQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTG--CPEDLISCADCGRS 244
K+ + L+ +P K P IP C FCLG ++ PE+LISCADCG S
Sbjct: 179 KESCESLSCLPPVSLLPHEKDKPVAEPIP--ICSFCLGTKEQNREKKPEELISCADCGNS 236
Query: 245 GHPSCLQFTVNMTAAVRTYRWQCIECKSCSLC-GTSENDDQLLFCDDCDRGYHMYCLSPP 303
GHPSCL+F+ +T V+ RWQCIECK+CS C +N D +LFCD CDRG+HM C PP
Sbjct: 237 GHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPP 296
Query: 304 MAEPPEGSWSCHLCL-----RHLKEKASAYI 329
+ P+G W C +C R L +K +A I
Sbjct: 297 LTRMPKGMWICQICRPRKKGRKLLQKKAAQI 327
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 137 bits (345), Expect = 1e-32
Identities = 68/151 (45%), Positives = 88/151 (58%), Gaps = 10/151 (6%)
Query: 187 KQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTG--CPEDLISCADCGRS 244
K+ + L+ +P K P IP C FCLG ++ PE+LISCADCG S
Sbjct: 179 KESCESLSCLPPVSLLPHEKDKPVAEPIP--ICSFCLGTKEQNREKKPEELISCADCGNS 236
Query: 245 GHPSCLQFTVNMTAAVRTYRWQCIECKSCSLC-GTSENDDQLLFCDDCDRGYHMYCLSPP 303
GHPSCL+F+ +T V+ RWQCIECK+CS C +N D +LFCD CDRG+HM C PP
Sbjct: 237 GHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPP 296
Query: 304 MAEPPEGSWSCHLCL-----RHLKEKASAYI 329
+ P+G W C +C R L +K +A I
Sbjct: 297 LTRMPKGMWICQICRPRKKGRKLLQKKAAQI 327
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 134 bits (336), Expect = 1e-31
Identities = 60/115 (52%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 206 KKAPDGTVIPNGYCDFCLGG--SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTY 263
K P IP C FCLG S + PE+L+SCADCG SGHPSCL+F +T V+
Sbjct: 205 KDQPRADPIP--ICSFCLGTKESNREKKPEELLSCADCGSSGHPSCLKFCPELTTNVKAL 262
Query: 264 RWQCIECKSCSLCGT-SENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 317
RWQCIECK+CS C N D +LFCD CDRG+HM C PP++ P+G W C +C
Sbjct: 263 RWQCIECKTCSACRVQGRNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVC 317
>gi|194328736 PHD finger protein 10 isoform b [Homo sapiens]
Length = 496
Score = 124 bits (311), Expect = 1e-28
Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 213 VIPNGYCDFCLGG--SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIEC 270
VIPN C CL G S K G E LI C+ C SGHPSCL T+ + + ++TY WQC+EC
Sbjct: 372 VIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMEC 431
Query: 271 KSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLR 319
K+C +CG ++++++FCD CDRGYH +C+ + P G W C C R
Sbjct: 432 KTCIICGQPHHEEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCCQR 478
>gi|194328734 PHD finger protein 10 isoform a [Homo sapiens]
Length = 498
Score = 124 bits (311), Expect = 1e-28
Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 213 VIPNGYCDFCLGG--SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIEC 270
VIPN C CL G S K G E LI C+ C SGHPSCL T+ + + ++TY WQC+EC
Sbjct: 374 VIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMEC 433
Query: 271 KSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLR 319
K+C +CG ++++++FCD CDRGYH +C+ + P G W C C R
Sbjct: 434 KTCIICGQPHHEEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCCQR 480
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 95.9 bits (237), Expect = 4e-20
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 220 DFCLG-GSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGT 278
D C+ GS G L++C+ CG+ HP C+ ++ +T V + W+C+EC C CG
Sbjct: 958 DMCVVCGSFGQGAEGRLLACSQCGQCYHPYCV--SIKITKVVLSKGWRCLECTVCEACGK 1015
Query: 279 SENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 318
+ + +LL CDDCD YH YCL PP+ P+G W C C+
Sbjct: 1016 ATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCV 1055
Score = 80.9 bits (198), Expect = 1e-15
Identities = 36/89 (40%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 232 PEDLIS---CADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFC 288
P DL+ C CG+ H CL V ++ WQC ECK C C S D ++L C
Sbjct: 350 PGDLLDQFFCTTCGQHYHGMCLDIAVT---PLKRAGWQCPECKVCQNCKQSGEDSKMLVC 406
Query: 289 DDCDRGYHMYCLSPPMAEPPEGSWSCHLC 317
D CD+GYH +CL P M P W C C
Sbjct: 407 DTCDKGYHTFCLQPVMKSVPTNGWKCKNC 435
Score = 36.6 bits (83), Expect = 0.032
Identities = 26/116 (22%), Positives = 39/116 (33%), Gaps = 36/116 (31%)
Query: 219 CDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGT 278
C C K++G ++ C C + H CLQ + +V T W+C C+ C CGT
Sbjct: 388 CKVCQN-CKQSGEDSKMLVCDTCDKGYHTFCLQPVMK---SVPTNGWKCKNCRICIECGT 443
Query: 279 SENDD--------------------------------QLLFCDDCDRGYHMYCLSP 302
+ +L C+ C R H+ C P
Sbjct: 444 RSSSQWHHNCLICDNCYQQQDNLCPFCGKCYHPELQKDMLHCNMCKRWVHLECDKP 499
Score = 31.6 bits (70), Expect = 1.0
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 269 ECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 317
E +C++C + + FC C + YH CL + W C C
Sbjct: 340 EDANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPEC 388
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 92.8 bits (229), Expect = 4e-19
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 210 DGTVIPNGYCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIE 269
D V+ C C GS G L++C+ C + HP C+ + ++ W+C+E
Sbjct: 1371 DKFVLMQDMCVVC--GSFGRGAEGHLLACSQCSQCYHPYCVNSKITKVMLLKG--WRCVE 1426
Query: 270 CKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 318
C C +CG + + +LL CDDCD YH YCL PP+ P+G W C C+
Sbjct: 1427 CIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCV 1475
Score = 88.6 bits (218), Expect = 7e-18
Identities = 39/84 (46%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 234 DLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDR 293
DL C CG H +CL +TA R WQC ECK C C ND ++L C+ CD+
Sbjct: 240 DLFFCTSCGHHYHGACLDTA--LTARKRA-GWQCPECKVCQACRKPGNDSKMLVCETCDK 296
Query: 294 GYHMYCLSPPMAEPPEGSWSCHLC 317
GYH +CL PPM E P SW C C
Sbjct: 297 GYHTFCLKPPMEELPAHSWKCKAC 320
Score = 33.5 bits (75), Expect = 0.27
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 201 RKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAV 260
RK + P+ V C C +K G ++ C C + H CL+ + A
Sbjct: 263 RKRAGWQCPECKV-----CQAC----RKPGNDSKMLVCETCDKGYHTFCLKPPMEELPA- 312
Query: 261 RTYRWQCIECKSCSLCG 277
+ W+C C+ C CG
Sbjct: 313 --HSWKCKACRVCRACG 327
Score = 32.3 bits (72), Expect = 0.60
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 219 CDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGT 278
C+ C S P L+ C DC S H CL + V W+C C SC CG
Sbjct: 1430 CEVCGQASD----PSRLLLCDDCDISYHTYCLDPPL---LTVPKGGWKCKWCVSCMQCGA 1482
Query: 279 S 279
+
Sbjct: 1483 A 1483
>gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [Homo
sapiens]
Length = 1482
Score = 67.0 bits (162), Expect = 2e-11
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 266 QCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 318
Q I+ C +C + DD+LLFCD CD YH++CL PP+ E P G W C C+
Sbjct: 253 QFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCI 305
>gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Homo
sapiens]
Length = 1539
Score = 67.0 bits (162), Expect = 2e-11
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 266 QCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 318
Q I+ C +C + DD+LLFCD CD YH++CL PP+ E P G W C C+
Sbjct: 310 QFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCI 362
>gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [Homo
sapiens]
Length = 1570
Score = 67.0 bits (162), Expect = 2e-11
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 266 QCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 318
Q I+ C +C + DD+LLFCD CD YH++CL PP+ E P G W C C+
Sbjct: 310 QFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCI 362
>gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [Homo
sapiens]
Length = 1379
Score = 65.9 bits (159), Expect = 5e-11
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 266 QCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 318
Q IE C +C + DD+LL CD CD YH++CL PP+ E P+G W C C+
Sbjct: 253 QFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCV 305
>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
sapiens]
Length = 1560
Score = 65.9 bits (159), Expect = 5e-11
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 266 QCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 318
Q IE C +C + DD+LL CD CD YH++CL PP+ E P+G W C C+
Sbjct: 320 QFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCV 372
>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
sapiens]
Length = 1690
Score = 65.1 bits (157), Expect = 8e-11
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 252 FTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGS 311
F + M T ++ C CG N+D+LL CD CD YH +CL PP+ + P+G
Sbjct: 275 FNMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGD 334
Query: 312 WSCHLCL 318
W C C+
Sbjct: 335 WRCPKCV 341
>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
sapiens]
Length = 1641
Score = 65.1 bits (157), Expect = 8e-11
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 252 FTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGS 311
F + M T ++ C CG N+D+LL CD CD YH +CL PP+ + P+G
Sbjct: 275 FNMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGD 334
Query: 312 WSCHLCL 318
W C C+
Sbjct: 335 WRCPKCV 341
>gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens]
Length = 1544
Score = 64.7 bits (156), Expect = 1e-10
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 273 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 318
C LCG+ ++D+LL CD CD YH +CL PP+ + P+G W C CL
Sbjct: 312 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCL 357
>gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive
domain 1B (RBP2-like), partial [Homo sapiens]
Length = 977
Score = 64.7 bits (156), Expect = 1e-10
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 273 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 318
C LCG+ ++D+LL CD CD YH +CL PP+ + P+G W C CL
Sbjct: 312 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCL 357
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 64.7 bits (156), Expect = 1e-10
Identities = 24/45 (53%), Positives = 29/45 (64%)
Query: 273 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 317
C +CG S+ +D+LL CD CD GYHM CL PP+ E P W C C
Sbjct: 186 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPEC 230
>gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo
sapiens]
Length = 1905
Score = 63.2 bits (152), Expect = 3e-10
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 261 RTYRWQ-CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 318
R+ W+ + +C +C +ND+ LL CD CDRG H+YC P M PEG W C +CL
Sbjct: 1666 RSIAWEKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCTVCL 1724
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 61.2 bits (147), Expect = 1e-09
Identities = 54/241 (22%), Positives = 93/241 (38%), Gaps = 47/241 (19%)
Query: 107 IPRRKNRAK-GKAYGIGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLA 165
+P RK + K GK G+ +++ S + + K G +++ G+S +
Sbjct: 237 VPIRKAKTKEGKGPGV----RKKIKGSKDGKKKGKGKKTAGLKFRFG-GISNKRKKGSSS 291
Query: 166 EEEGEENAERHALPFHRKNNHKQFYKELAWVPEAQRKHTAKKAPDGTVIPNG---YCDFC 222
EE+ E ++ + H + + L +++R+ K+ DG YC+ C
Sbjct: 292 EEDEREESDFDSASIHSASVRSECSAALG--KKSKRRRKKKRIDDGDGYETDHQDYCEVC 349
Query: 223 LGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSEND 282
G ++I C C R+ H CL + + W C C+ + ++D
Sbjct: 350 QQGG-------EIILCDTCPRAYHLVCLDPELEKAPEGK---WSCPHCEKEGIQWEPKDD 399
Query: 283 D--------------------------QLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHL 316
D +LL CD C YH++CL+PP+ E P G W C
Sbjct: 400 DDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPR 459
Query: 317 C 317
C
Sbjct: 460 C 460
>gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo
sapiens]
Length = 1483
Score = 58.5 bits (140), Expect = 8e-09
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 273 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 317
C +C DD+L+ CD+C++ +H++CL P + E P+G W C C
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
Score = 28.9 bits (63), Expect = 6.7
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Query: 216 NGYCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECK 271
N C C +K G + LI C +C ++ H CL+ + V WQC C+
Sbjct: 1184 NARCKVC----RKKGEDDKLILCDECNKAFHLFCLRPAL---YEVPDGEWQCPACQ 1232
>gi|115430235 ubiquitin-like with PHD and ring finger domains 1
isoform 1 [Homo sapiens]
Length = 793
Score = 57.8 bits (138), Expect = 1e-08
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 267 CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAE-PPEGSWSCHLCLRHLKE 323
C C +C LCG ++ D+ L CD+CD +H+YCL PP++ P E W C C E
Sbjct: 313 CRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDASE 369
>gi|115430233 ubiquitin-like with PHD and ring finger domains 1
isoform 2 [Homo sapiens]
Length = 806
Score = 57.8 bits (138), Expect = 1e-08
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 267 CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAE-PPEGSWSCHLCLRHLKE 323
C C +C LCG ++ D+ L CD+CD +H+YCL PP++ P E W C C E
Sbjct: 326 CRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDASE 382
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 55.8 bits (133), Expect = 5e-08
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 273 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 318
C +C +N++ LL CD CD+G H YC P + P+G W C C+
Sbjct: 1934 CQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACI 1979
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 55.5 bits (132), Expect = 7e-08
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 273 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHL 321
C CG + + +L CD CD GYH CL PP+ P+G W C C L
Sbjct: 894 CKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQHKL 942
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,721,969
Number of Sequences: 37866
Number of extensions: 882564
Number of successful extensions: 10668
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 387
Number of HSP's that attempted gapping in prelim test: 3517
Number of HSP's gapped (non-prelim): 5443
length of query: 332
length of database: 18,247,518
effective HSP length: 103
effective length of query: 229
effective length of database: 14,347,320
effective search space: 3285536280
effective search space used: 3285536280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.