Guide to the Human Genome
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Name: DPF3 Sequence: fasta or formatted (357aa) NCBI GI: 148762958
Description:

D4, zinc and double PHD fingers, family 3

Referenced in:

Neurons
PHD Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         24           5
 C cysteine            3.4         12           1
 D aspartate           6.4         23           2
 E glutamate          11.5         41           3
 F phenylalanine       2.0          7           1
 G glycine             8.7         31           2
 H histidine           3.6         13           1
 I isoleucine          2.5          9           1
 K lysine              6.4         23           2
 L leucine             7.0         25           2
 M methionine          0.8          3           1
 N asparagine          4.5         16           2
 P proline             5.9         21           2
 Q glutamine           2.8         10           1
 R arginine           10.1         36           3
 S serine              6.7         24           1
 T threonine           4.5         16           2
 V valine              3.1         11           1
 W tryptophan          0.6          2           1
 Y tyrosine            2.8         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   D4, zinc and double PHD fingers, family 3 
DPF1                  0.503   D4, zinc and double PHD fingers family 1 isoform a ...
DPF2                  0.488   D4, zinc and double PHD fingers family 2 
DPF1                  0.412   D4, zinc and double PHD fingers family 1 isoform b ...
DPF1                  0.371   D4, zinc and double PHD fingers family 1 isoform c ...
ZBTB17                0.030   zinc finger and BTB domain containing 17 
MYST3                 0.028   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.028   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.028   MYST histone acetyltransferase (monocytic leukemia)...
MYST4                 0.026   MYST histone acetyltransferase (monocytic leukemia)...
PHF10                 0.024   PHD finger protein 10 isoform b 
PHF10                 0.024   PHD finger protein 10 isoform a 
HDGF2                 0.024   hepatoma-derived growth factor-related protein 2 iso...
HDGF2                 0.024   hepatoma-derived growth factor-related protein 2 iso...
WDR87                 0.021   NYD-SP11 protein 
PATZ1                 0.021   POZ (BTB) and AT hook containing zinc finger 1 long ...
PATZ1                 0.021   POZ (BTB) and AT hook containing zinc finger 1 short...
PATZ1                 0.021   POZ (BTB) and AT hook containing zinc finger 1 long ...
PATZ1                 0.021   POZ (BTB) and AT hook containing zinc finger 1 long ...
IKZF4                 0.021   zinc finger protein, subfamily 1A, 4 
ZNF618                0.021   zinc finger protein 618 
ZNF200                0.019   zinc finger protein 200 isoform 3 
ZNF200                0.019   zinc finger protein 200 isoform 3 
ZNF200                0.019   zinc finger protein 200 isoform 3 
ZNF200                0.019   zinc finger protein 200 isoform 1 
ZNF200                0.019   zinc finger protein 200 isoform 2 
ZNF200                0.019   zinc finger protein 200 isoform 1 
ZNF782                0.019   zinc finger protein 782 
ZNF691                0.019   zinc finger protein 691 
ZNF625                0.019   zinc finger protein 625 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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