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Search of human proteins with 205830432
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|205830432 D4, zinc and double PHD fingers family 1 isoform b
[Homo sapiens]
(380 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|205830432 D4, zinc and double PHD fingers family 1 isoform b ... 818 0.0
gi|205830430 D4, zinc and double PHD fingers family 1 isoform a ... 766 0.0
gi|205830434 D4, zinc and double PHD fingers family 1 isoform c ... 592 e-169
gi|5454004 D4, zinc and double PHD fingers family 2 [Homo sapiens] 407 e-114
gi|148762958 D4, zinc and double PHD fingers, family 3 [Homo sap... 323 2e-88
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 130 2e-30
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 130 2e-30
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 130 2e-30
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 130 2e-30
gi|194328736 PHD finger protein 10 isoform b [Homo sapiens] 116 4e-26
gi|194328734 PHD finger protein 10 isoform a [Homo sapiens] 116 4e-26
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 91 2e-18
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 85 1e-16
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 60 3e-09
gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [H... 59 7e-09
gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Ho... 59 7e-09
gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [H... 59 7e-09
gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [H... 58 2e-08
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H... 58 2e-08
gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens] 57 3e-08
gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive ... 57 3e-08
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 57 3e-08
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa... 57 3e-08
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa... 57 3e-08
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 57 4e-08
gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo... 55 1e-07
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 52 7e-07
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 52 7e-07
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 52 7e-07
gi|4557293 autoimmune regulator isoform 2 [Homo sapiens] 52 9e-07
>gi|205830432 D4, zinc and double PHD fingers family 1 isoform b
[Homo sapiens]
Length = 380
Score = 818 bits (2113), Expect = 0.0
Identities = 380/380 (100%), Positives = 380/380 (100%)
Query: 1 MGGLSARPTAGRTDPAGTCWGQDPGSKMATVIPGPLSLGEDFYREAIEHCRSYNARLCAE 60
MGGLSARPTAGRTDPAGTCWGQDPGSKMATVIPGPLSLGEDFYREAIEHCRSYNARLCAE
Sbjct: 1 MGGLSARPTAGRTDPAGTCWGQDPGSKMATVIPGPLSLGEDFYREAIEHCRSYNARLCAE 60
Query: 61 RSLRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLR 120
RSLRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLR
Sbjct: 61 RSLRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLR 120
Query: 121 PCEYKIDCEAPLKKEGGLPEGPVLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDL 180
PCEYKIDCEAPLKKEGGLPEGPVLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDL
Sbjct: 121 PCEYKIDCEAPLKKEGGLPEGPVLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDL 180
Query: 181 EVEDLEDDIPRRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDKFYKELAWVPEAQRK 240
EVEDLEDDIPRRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDKFYKELAWVPEAQRK
Sbjct: 181 EVEDLEDDIPRRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDKFYKELAWVPEAQRK 240
Query: 241 HTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRT 300
HTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRT
Sbjct: 241 HTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRT 300
Query: 301 YRWQCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSW 360
YRWQCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSW
Sbjct: 301 YRWQCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSW 360
Query: 361 SCHLCLRHLKEKASAYITLT 380
SCHLCLRHLKEKASAYITLT
Sbjct: 361 SCHLCLRHLKEKASAYITLT 380
>gi|205830430 D4, zinc and double PHD fingers family 1 isoform a
[Homo sapiens]
Length = 414
Score = 766 bits (1977), Expect = 0.0
Identities = 369/424 (87%), Positives = 370/424 (87%), Gaps = 54/424 (12%)
Query: 1 MGGLSARPTAGRTDPAGTCWGQDPGSKMATVIPGPLSLGEDFYREAIEHCRSYNARLCAE 60
MGGLSARPTAGRTDPAGTCWGQDPGSKMATVIPGPLSLGEDFYREAIEHCRSYNARLCAE
Sbjct: 1 MGGLSARPTAGRTDPAGTCWGQDPGSKMATVIPGPLSLGEDFYREAIEHCRSYNARLCAE 60
Query: 61 RSLRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLR 120
RSLRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLR
Sbjct: 61 RSLRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLR 120
Query: 121 PCEYKIDCEAPLKKEGGLPEGPVLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDL 180
PCEYKIDCEAPLKKEGGLPEGPVLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDL
Sbjct: 121 PCEYKIDCEAPLKKEGGLPEGPVLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDL 180
Query: 181 EVEDLEDDIPRRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCD--------------- 225
EVEDLEDDIPRRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCD
Sbjct: 181 EVEDLEDDIPRRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYH 240
Query: 226 -----------------------------KFYKELAWVPEAQRKHTAKKAPDGTVIPNGY 256
+FYKELAWVPEAQRKHTAKKAPDGTVIPNGY
Sbjct: 241 YTHTHLAEEEGEENAERHALPFHRKNNHKQFYKELAWVPEAQRKHTAKKAPDGTVIPNGY 300
Query: 257 CDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGT 316
CDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGT
Sbjct: 301 CDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGT 360
Query: 317 SENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAY 376
SEND DQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAY
Sbjct: 361 SEND----------DQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAY 410
Query: 377 ITLT 380
ITLT
Sbjct: 411 ITLT 414
>gi|205830434 D4, zinc and double PHD fingers family 1 isoform c
[Homo sapiens]
Length = 332
Score = 592 bits (1526), Expect = e-169
Identities = 287/342 (83%), Positives = 288/342 (84%), Gaps = 54/342 (15%)
Query: 83 MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGP 142
MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGP
Sbjct: 1 MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGP 60
Query: 143 VLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYG 202
VLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYG
Sbjct: 61 VLEALLCAETGEKKIELKEEETIMDCQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYG 120
Query: 203 IGGLRKRQDTASLEDRDKPYVCD------------------------------------- 225
IGGLRKRQDTASLEDRDKPYVCD
Sbjct: 121 IGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEENAERHALPF 180
Query: 226 -------KFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCAD 278
+FYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCAD
Sbjct: 181 HRKNNHKQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCAD 240
Query: 279 CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDD 338
CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSEND DQLLFCDD
Sbjct: 241 CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSEND----------DQLLFCDD 290
Query: 339 CDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAYITLT 380
CDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAYITLT
Sbjct: 291 CDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAYITLT 332
>gi|5454004 D4, zinc and double PHD fingers family 2 [Homo sapiens]
Length = 391
Score = 407 bits (1047), Expect = e-114
Identities = 217/395 (54%), Positives = 259/395 (65%), Gaps = 56/395 (14%)
Query: 28 MATVIPGPLSL-GEDFYREAIEHCRSYNARLCAERSLRLPFLDSQTGVAQNNCYIWMEKT 86
MA V+ + L GE +Y++A+E C +YNARLCAERS+RLPFLDSQTGVAQ+NCYIWMEK
Sbjct: 1 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR 60
Query: 87 HRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPE-GPVLE 145
HRGPGLA GQ+Y+YPAR WRKKRR + EDPRL K D + LKKEG + + G LE
Sbjct: 61 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE 120
Query: 146 ALLCAETGEKK---------IELKEEETIMDCQKQQLLE---FPHDLEVEDLEDDIPRRK 193
ALL + EK+ L E ++++LE F DL+ ED E+D P+R+
Sbjct: 121 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR 180
Query: 194 NRAKGKAYGIGGLRKRQDTASLEDRDKPYVCD---KFYKELAWV---------------- 234
+ K K G+G RK+ D + LEDRDKPY CD K YK +
Sbjct: 181 GKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED 240
Query: 235 --------PEAQR--KHTAKKAPDGTVIPNGYCDFCLGGSK---KTGCPEDLISCADCGR 281
P +QR + +KK PDG +PN YCDFCLG SK KTG PE+L+SC+DCGR
Sbjct: 241 KEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGR 300
Query: 282 SGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDR 341
SGHPSCLQFT M AAV+TYRWQCIECK C++CGTSEND DQLLFCDDCDR
Sbjct: 301 SGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSEND----------DQLLFCDDCDR 350
Query: 342 GYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAY 376
GYHMYCL+P M+EPPEGSWSCHLCL LKEKAS Y
Sbjct: 351 GYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIY 385
>gi|148762958 D4, zinc and double PHD fingers, family 3 [Homo
sapiens]
Length = 357
Score = 323 bits (827), Expect = 2e-88
Identities = 174/294 (59%), Positives = 203/294 (69%), Gaps = 39/294 (13%)
Query: 28 MATVIPGPL-SLGEDFYREAIEHCRSYNARLCAERSLRLPFLDSQTGVAQNNCYIWMEKT 86
MATVI PL +LG+ FY+EAIEHCRSYN+RLCAERS+RLPFLDSQTGVAQNNCYIWMEK
Sbjct: 1 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKR 60
Query: 87 HRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGPVLEA 146
HRGPGLAPGQ+YTYPARCWRKKRRL+ EDP+LR E K + E PLKK+G E LEA
Sbjct: 61 HRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSESTTLEA 120
Query: 147 LLCAETGEKKIELKEEETIMDCQKQQLLEFPHDL----EVEDLEDDIPRRKNRAKGKAYG 202
LL E EKK++ +EEE+I + Q+ +LE ++ E EDLE+DIP+RKNR +G+A G
Sbjct: 121 LLRGEGVEKKVDAREEESIQEIQR--VLENDENVEEGNEEEDLEEDIPKRKNRTRGRARG 178
Query: 203 IGGLRKRQDTASLEDRDKPYVCD---KFYKELAWV--------------PEAQ------- 238
G R+R D AS ED DKPYVCD K YK + EAQ
Sbjct: 179 SAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGDEAQDQETRSP 238
Query: 239 -----RKHTAKKAPDGTVIPNGYCDFCLGGS---KKTGCPEDLISCADCGRSGH 284
H +K PDGTVIPN YCDFCLGGS KK+G PE+L+SCADCGRS H
Sbjct: 239 PNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRSAH 292
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 130 bits (327), Expect = 2e-30
Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 18/156 (11%)
Query: 229 KELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTG--CPEDLISCADCGRSGHPS 286
+ L+ +P K P IP C FCLG ++ PE+LISCADCG SGHPS
Sbjct: 183 ESLSCLPPVSLLPHEKDKPVAEPIP--ICSFCLGTKEQNREKKPEELISCADCGNSGHPS 240
Query: 287 CLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMY 346
CL+F+ +T V+ RWQCIECK+CS C + D +LFCD CDRG+HM
Sbjct: 241 CLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNA---------DNMLFCDSCDRGFHME 291
Query: 347 CLSPPMAEPPEGSWSCHLCL-----RHLKEKASAYI 377
C PP+ P+G W C +C R L +K +A I
Sbjct: 292 CCDPPLTRMPKGMWICQICRPRKKGRKLLQKKAAQI 327
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 130 bits (327), Expect = 2e-30
Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 18/156 (11%)
Query: 229 KELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTG--CPEDLISCADCGRSGHPS 286
+ L+ +P K P IP C FCLG ++ PE+LISCADCG SGHPS
Sbjct: 183 ESLSCLPPVSLLPHEKDKPVAEPIP--ICSFCLGTKEQNREKKPEELISCADCGNSGHPS 240
Query: 287 CLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMY 346
CL+F+ +T V+ RWQCIECK+CS C + D +LFCD CDRG+HM
Sbjct: 241 CLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNA---------DNMLFCDSCDRGFHME 291
Query: 347 CLSPPMAEPPEGSWSCHLCL-----RHLKEKASAYI 377
C PP+ P+G W C +C R L +K +A I
Sbjct: 292 CCDPPLTRMPKGMWICQICRPRKKGRKLLQKKAAQI 327
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 130 bits (327), Expect = 2e-30
Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 18/156 (11%)
Query: 229 KELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGGSKKTG--CPEDLISCADCGRSGHPS 286
+ L+ +P K P IP C FCLG ++ PE+LISCADCG SGHPS
Sbjct: 183 ESLSCLPPVSLLPHEKDKPVAEPIP--ICSFCLGTKEQNREKKPEELISCADCGNSGHPS 240
Query: 287 CLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMY 346
CL+F+ +T V+ RWQCIECK+CS C + D +LFCD CDRG+HM
Sbjct: 241 CLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNA---------DNMLFCDSCDRGFHME 291
Query: 347 CLSPPMAEPPEGSWSCHLCL-----RHLKEKASAYI 377
C PP+ P+G W C +C R L +K +A I
Sbjct: 292 CCDPPLTRMPKGMWICQICRPRKKGRKLLQKKAAQI 327
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 130 bits (327), Expect = 2e-30
Identities = 67/163 (41%), Positives = 85/163 (52%), Gaps = 16/163 (9%)
Query: 205 GLRKRQDTASLEDRDKPYVCDKFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGG- 263
G + R + SL+ + P F L P K P IP C FCLG
Sbjct: 169 GPQYRVNYGSLDGKGAPQYPSAFPSSL---PPVSLLPHEKDQPRADPIP--ICSFCLGTK 223
Query: 264 -SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDGA 322
S + PE+L+SCADCG SGHPSCL+F +T V+ RWQCIECK+CS C +
Sbjct: 224 ESNREKKPEELLSCADCGSSGHPSCLKFCPELTTNVKALRWQCIECKTCSACRVQGRNA- 282
Query: 323 SWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 365
D +LFCD CDRG+HM C PP++ P+G W C +C
Sbjct: 283 --------DNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVC 317
>gi|194328736 PHD finger protein 10 isoform b [Homo sapiens]
Length = 496
Score = 116 bits (290), Expect = 4e-26
Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 14/119 (11%)
Query: 251 VIPNGYCDFCLGG--SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIEC 308
VIPN C CL G S K G E LI C+ C SGHPSCL T+ + + ++TY WQC+EC
Sbjct: 372 VIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMEC 431
Query: 309 KSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLR 367
K+C +CG + +++++FCD CDRGYH +C+ + P G W C C R
Sbjct: 432 KTCIICGQPHH----------EEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCCQR 478
>gi|194328734 PHD finger protein 10 isoform a [Homo sapiens]
Length = 498
Score = 116 bits (290), Expect = 4e-26
Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 14/119 (11%)
Query: 251 VIPNGYCDFCLGG--SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIEC 308
VIPN C CL G S K G E LI C+ C SGHPSCL T+ + + ++TY WQC+EC
Sbjct: 374 VIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMEC 433
Query: 309 KSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLR 367
K+C +CG + +++++FCD CDRGYH +C+ + P G W C C R
Sbjct: 434 KTCIICGQPHH----------EEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCCQR 480
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 90.5 bits (223), Expect = 2e-18
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 13/110 (11%)
Query: 258 DFCLG-GSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGT 316
D C+ GS G L++C+ CG+ HP C+ ++ +T V + W+C+EC C CG
Sbjct: 958 DMCVVCGSFGQGAEGRLLACSQCGQCYHPYCV--SIKITKVVLSKGWRCLECTVCEACGK 1015
Query: 317 SENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 366
+ + G +LL CDDCD YH YCL PP+ P+G W C C+
Sbjct: 1016 ATDPG----------RLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCV 1055
Score = 72.8 bits (177), Expect = 5e-13
Identities = 36/99 (36%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 270 PEDLIS---CADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDGASWAG 326
P DL+ C CG+ H CL V ++ WQC ECK C C S D
Sbjct: 350 PGDLLDQFFCTTCGQHYHGMCLDIAVT---PLKRAGWQCPECKVCQNCKQSGEDS----- 401
Query: 327 LTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 365
++L CD CD+GYH +CL P M P W C C
Sbjct: 402 -----KMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNC 435
Score = 41.6 bits (96), Expect = 0.001
Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 257 CDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGT 316
C C K++G ++ C C + H CLQ + +V T W+C C+ C CGT
Sbjct: 388 CKVCQN-CKQSGEDSKMLVCDTCDKGYHTFCLQPVMK---SVPTNGWKCKNCRICIECGT 443
Query: 317 SENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPE---GSWSCHLCLR 367
+ W L CD+C + C PE C++C R
Sbjct: 444 --RSSSQW-----HHNCLICDNCYQQQDNLCPFCGKCYHPELQKDMLHCNMCKR 490
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 84.7 bits (208), Expect = 1e-16
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 248 DGTVIPNGYCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIE 307
D V+ C C GS G L++C+ C + HP C+ + ++ W+C+E
Sbjct: 1371 DKFVLMQDMCVVC--GSFGRGAEGHLLACSQCSQCYHPYCVNSKITKVMLLKG--WRCVE 1426
Query: 308 CKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 366
C C +CG + + +LL CDDCD YH YCL PP+ P+G W C C+
Sbjct: 1427 CIVCEVCGQASDPS----------RLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCV 1475
Score = 80.5 bits (197), Expect = 2e-15
Identities = 39/94 (41%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 272 DLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDGASWAGLTPQD 331
DL C CG H +CL +TA R WQC ECK C C ND
Sbjct: 240 DLFFCTSCGHHYHGACLDTA--LTARKRA-GWQCPECKVCQACRKPGNDS---------- 286
Query: 332 QLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 365
++L C+ CD+GYH +CL PPM E P SW C C
Sbjct: 287 KMLVCETCDKGYHTFCLKPPMEELPAHSWKCKAC 320
Score = 35.0 bits (79), Expect = 0.11
Identities = 31/114 (27%), Positives = 38/114 (33%), Gaps = 28/114 (24%)
Query: 257 CDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCG- 315
C+ C S P L+ C DC S H CL + V W+C C SC CG
Sbjct: 1430 CEVCGQASD----PSRLLLCDDCDISYHTYCLDPPL---LTVPKGGWKCKWCVSCMQCGA 1482
Query: 316 TSENDGASW--------------------AGLTPQDQLLFCDDCDRGYHMYCLS 349
S W A +D L+ C C+R H C S
Sbjct: 1483 ASPGFHCEWQNSYTHCGPCASLVTCPICHAPYVEEDLLIQCRHCERWMHAGCES 1536
Score = 34.7 bits (78), Expect = 0.15
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 15/89 (16%)
Query: 239 RKHTAKKAPDGTVIPNGYCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAV 298
RK + P+ V C C +K G ++ C C + H CL+ + A
Sbjct: 263 RKRAGWQCPECKV-----CQAC----RKPGNDSKMLVCETCDKGYHTFCLKPPMEELPA- 312
Query: 299 RTYRWQCIECKSCSLCGTSE---NDGASW 324
+ W+C C+ C CG N + W
Sbjct: 313 --HSWKCKACRVCRACGAGSAELNPNSEW 339
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 60.1 bits (144), Expect = 3e-09
Identities = 48/208 (23%), Positives = 77/208 (37%), Gaps = 45/208 (21%)
Query: 193 KNRAKGKA-----YGIGGLRKRQDTASLEDRDKPYVCD-----------KFYKELAWVPE 236
K + KGK + GG+ ++ S + D+ D + A +
Sbjct: 263 KKKGKGKKTAGLKFRFGGISNKRKKGSSSEEDEREESDFDSASIHSASVRSECSAALGKK 322
Query: 237 AQRKHTAKKAPDGTVIPNG---YCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVN 293
++R+ K+ DG YC+ C G ++I C C R+ H CL +
Sbjct: 323 SKRRRKKKRIDDGDGYETDHQDYCEVCQQGG-------EIILCDTCPRAYHLVCLDPELE 375
Query: 294 MTAAVRTYRWQCIECKSCSL---------------CGTSENDGASWAGLTPQD-QLLFCD 337
+ W C C+ + C E+D + + +LL CD
Sbjct: 376 KAPEGK---WSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCD 432
Query: 338 DCDRGYHMYCLSPPMAEPPEGSWSCHLC 365
C YH++CL+PP+ E P G W C C
Sbjct: 433 ACPSSYHLHCLNPPLPEIPNGEWLCPRC 460
>gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [Homo
sapiens]
Length = 1482
Score = 58.9 bits (141), Expect = 7e-09
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 304 QCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCH 363
Q I+ C +C + D D+LLFCD CD YH++CL PP+ E P G W C
Sbjct: 253 QFIDSYICQVCSRGDED----------DKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCP 302
Query: 364 LCL 366
C+
Sbjct: 303 KCI 305
>gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Homo
sapiens]
Length = 1539
Score = 58.9 bits (141), Expect = 7e-09
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 304 QCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCH 363
Q I+ C +C + D D+LLFCD CD YH++CL PP+ E P G W C
Sbjct: 310 QFIDSYICQVCSRGDED----------DKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCP 359
Query: 364 LCL 366
C+
Sbjct: 360 KCI 362
>gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [Homo
sapiens]
Length = 1570
Score = 58.9 bits (141), Expect = 7e-09
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 304 QCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCH 363
Q I+ C +C + D D+LLFCD CD YH++CL PP+ E P G W C
Sbjct: 310 QFIDSYICQVCSRGDED----------DKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCP 359
Query: 364 LCL 366
C+
Sbjct: 360 KCI 362
>gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [Homo
sapiens]
Length = 1379
Score = 57.8 bits (138), Expect = 2e-08
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 304 QCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCH 363
Q IE C +C + D D+LL CD CD YH++CL PP+ E P+G W C
Sbjct: 253 QFIESYVCRMCSRGDED----------DKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCP 302
Query: 364 LCL 366
C+
Sbjct: 303 KCV 305
>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
sapiens]
Length = 1560
Score = 57.8 bits (138), Expect = 2e-08
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 304 QCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCH 363
Q IE C +C + D D+LL CD CD YH++CL PP+ E P+G W C
Sbjct: 320 QFIESYVCRMCSRGDED----------DKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCP 369
Query: 364 LCL 366
C+
Sbjct: 370 KCV 372
>gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens]
Length = 1544
Score = 57.0 bits (136), Expect = 3e-08
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 10/56 (17%)
Query: 311 CSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 366
C LCG S ND +D+LL CD CD YH +CL PP+ + P+G W C CL
Sbjct: 312 CLLCG-SGND---------EDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCL 357
>gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive
domain 1B (RBP2-like), partial [Homo sapiens]
Length = 977
Score = 57.0 bits (136), Expect = 3e-08
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 10/56 (17%)
Query: 311 CSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 366
C LCG S ND +D+LL CD CD YH +CL PP+ + P+G W C CL
Sbjct: 312 CLLCG-SGND---------EDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCL 357
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 57.0 bits (136), Expect = 3e-08
Identities = 54/227 (23%), Positives = 82/227 (36%), Gaps = 56/227 (24%)
Query: 182 VEDLEDDIPRRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCD---------------- 225
V D + P++ K K G G RKR +S ED D D
Sbjct: 280 VPDAKKPKPKKVAPLKIKLGGFGSKRKR---SSSEDDDLDVESDFDDASINSYSVSDGST 336
Query: 226 ----KFYKELAWVPEAQRKHTAKKAPDGTVIPN-GYCDFCLGGSKKTGCPEDLISCADCG 280
+ K+L + ++ A DG + YC+ C G ++I C C
Sbjct: 337 SRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG-------EIILCDTCP 389
Query: 281 RSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDGASWAGLTPQ---------- 330
R+ H CL +M A +W C C+ + ++ D + + +
Sbjct: 390 RAYHMVCLD--PDMEKAPEG-KWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDLEEEDD 446
Query: 331 ------------DQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 365
+LL CD C YH++CL+PP+ E P G W C C
Sbjct: 447 HHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493
>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
sapiens]
Length = 1690
Score = 57.0 bits (136), Expect = 3e-08
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 290 FTVNMTAAVRTYRWQCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLS 349
F + M T ++ C CG N+ D+LL CD CD YH +CL
Sbjct: 275 FNMQMRQRKGTLSVNFVDLYVCMFCGRGNNE----------DKLLLCDGCDDSYHTFCLI 324
Query: 350 PPMAEPPEGSWSCHLCL 366
PP+ + P+G W C C+
Sbjct: 325 PPLPDVPKGDWRCPKCV 341
>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
sapiens]
Length = 1641
Score = 57.0 bits (136), Expect = 3e-08
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 290 FTVNMTAAVRTYRWQCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLS 349
F + M T ++ C CG N+ D+LL CD CD YH +CL
Sbjct: 275 FNMQMRQRKGTLSVNFVDLYVCMFCGRGNNE----------DKLLLCDGCDDSYHTFCLI 324
Query: 350 PPMAEPPEGSWSCHLCL 366
PP+ + P+G W C C+
Sbjct: 325 PPLPDVPKGDWRCPKCV 341
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 56.6 bits (135), Expect = 4e-08
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Query: 311 CSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 365
C +CG S+ + D+LL CD CD GYHM CL PP+ E P W C C
Sbjct: 186 CEVCGRSDRE----------DRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPEC 230
>gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo
sapiens]
Length = 1905
Score = 55.1 bits (131), Expect = 1e-07
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 299 RTYRWQ-CIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPE 357
R+ W+ + +C +C +ND + LL CD CDRG H+YC P M PE
Sbjct: 1666 RSIAWEKSVNKVTCLVCRKGDND----------EFLLLCDGCDRGCHIYCHRPKMEAVPE 1715
Query: 358 GSWSCHLCL 366
G W C +CL
Sbjct: 1716 GDWFCTVCL 1724
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 52.4 bits (124), Expect = 7e-07
Identities = 33/139 (23%), Positives = 49/139 (35%), Gaps = 48/139 (34%)
Query: 256 YCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCG 315
YC+ C G ++I C C R+ H CL ++ + W C C
Sbjct: 381 YCEVCQQGG-------EIILCDTCPRAYHLVCLDPELDRAPEGK---WSCPHC------- 423
Query: 316 TSENDGASWAGLTPQDQ-----------------------------LLFCDDCDRGYHMY 346
E +G W +++ LL CD C YH++
Sbjct: 424 --EKEGVQWEAKEEEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIH 481
Query: 347 CLSPPMAEPPEGSWSCHLC 365
CL+PP+ + P G W C C
Sbjct: 482 CLNPPLPDIPNGEWLCPRC 500
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 52.4 bits (124), Expect = 7e-07
Identities = 33/139 (23%), Positives = 49/139 (35%), Gaps = 48/139 (34%)
Query: 256 YCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCG 315
YC+ C G ++I C C R+ H CL ++ + W C C
Sbjct: 381 YCEVCQQGG-------EIILCDTCPRAYHLVCLDPELDRAPEGK---WSCPHC------- 423
Query: 316 TSENDGASWAGLTPQDQ-----------------------------LLFCDDCDRGYHMY 346
E +G W +++ LL CD C YH++
Sbjct: 424 --EKEGVQWEAKEEEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIH 481
Query: 347 CLSPPMAEPPEGSWSCHLC 365
CL+PP+ + P G W C C
Sbjct: 482 CLNPPLPDIPNGEWLCPRC 500
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 52.4 bits (124), Expect = 7e-07
Identities = 33/139 (23%), Positives = 49/139 (35%), Gaps = 48/139 (34%)
Query: 256 YCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCG 315
YC+ C G ++I C C R+ H CL ++ + W C C
Sbjct: 440 YCEVCQQGG-------EIILCDTCPRAYHLVCLDPELDRAPEGK---WSCPHC------- 482
Query: 316 TSENDGASWAGLTPQDQ-----------------------------LLFCDDCDRGYHMY 346
E +G W +++ LL CD C YH++
Sbjct: 483 --EKEGVQWEAKEEEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIH 540
Query: 347 CLSPPMAEPPEGSWSCHLC 365
CL+PP+ + P G W C C
Sbjct: 541 CLNPPLPDIPNGEWLCPRC 559
>gi|4557293 autoimmune regulator isoform 2 [Homo sapiens]
Length = 348
Score = 52.0 bits (123), Expect = 9e-07
Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Query: 253 PNGYC----DFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTV-NMTAAVRTYRWQCIE 307
P G C + GG + P + + G SG C + A+R
Sbjct: 28 PGGVCWRPDGWGTGGQGRISGPGSMGAGQRLGSSGTQRCCWGSCFGKEVALRRVLHPSPV 87
Query: 308 CKSCS-LCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 366
C S LC +E++ A +L+ CD C R +H+ CLSPP+ E P G+W C CL
Sbjct: 88 CMGVSCLCQKNEDECAV---CRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCL 144
Query: 367 R 367
+
Sbjct: 145 Q 145
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,922,917
Number of Sequences: 37866
Number of extensions: 1020261
Number of successful extensions: 3480
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 3156
Number of HSP's gapped (non-prelim): 400
length of query: 380
length of database: 18,247,518
effective HSP length: 104
effective length of query: 276
effective length of database: 14,309,454
effective search space: 3949409304
effective search space used: 3949409304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.