Search of human proteins with 20544168

Search of human proteins with 20544168

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|20544168 histone cluster 1, H1t [Homo sapiens]
         (207 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|20544168 histone cluster 1, H1t [Homo sapiens]                     386   e-108
gi|4885379 histone cluster 1, H1e [Homo sapiens]                      183   8e-47
gi|4885381 histone cluster 1, H1b [Homo sapiens]                      173   8e-44
gi|4885373 histone cluster 1, H1a [Homo sapiens]                      173   1e-43
gi|4885375 histone cluster 1, H1c [Homo sapiens]                      172   2e-43
gi|4885377 histone cluster 1, H1d [Homo sapiens]                      165   2e-41
gi|4885371 H1 histone family, member 0 [Homo sapiens]                  86   2e-17
gi|5174449 H1 histone family, member X [Homo sapiens]                  69   3e-12
gi|32401437 H1 histone family, member N, testis-specific [Homo s...    52   4e-07
gi|56676330 HP1-BP74 [Homo sapiens]                                    50   1e-06
gi|111548666 SNF2 histone linker PHD RING helicase isoform a [Ho...    49   3e-06
gi|27436873 SNF2 histone linker PHD RING helicase isoform b [Hom...    49   3e-06
gi|24475863 H1 histone family, member O, oocyte-specific [Homo s...    49   4e-06
gi|154354972 phosphatase and actin regulator 2 isoform 4 [Homo s...    41   8e-04
gi|154354970 phosphatase and actin regulator 2 isoform 2 [Homo s...    41   8e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]     40   0.001
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa...    37   0.009
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f...    36   0.020
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e...    36   0.020
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d...    36   0.020
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ...    36   0.020
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ...    36   0.020
gi|153945728 microtubule-associated protein 1B [Homo sapiens]          36   0.020
gi|169218320 PREDICTED: similar to BCL2-associated transcription...    36   0.026
gi|117938254 BCL2-associated transcription factor 1 isoform 3 [H...    36   0.026
gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H...    36   0.026
gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom...    36   0.026
gi|51317366 myosin XVIIIB [Homo sapiens]                               36   0.026
gi|239756568 PREDICTED: similar to BCL2-associated transcription...    35   0.034
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap...    35   0.034

>gi|20544168 histone cluster 1, H1t [Homo sapiens]
          Length = 207

 Score =  386 bits (991), Expect = e-108
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MSETVPAASASAGVAAMEKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVG 60
           MSETVPAASASAGVAAMEKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVG
Sbjct: 1   MSETVPAASASAGVAAMEKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVG 60

Query: 61  MSLVALKKALAAAGYDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKST 120
           MSLVALKKALAAAGYDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKST
Sbjct: 61  MSLVALKKALAAAGYDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKST 120

Query: 121 RSKAKKSVSAKTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTVRSGRKAKGAKGKQQQK 180
           RSKAKKSVSAKTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTVRSGRKAKGAKGKQQQK
Sbjct: 121 RSKAKKSVSAKTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTVRSGRKAKGAKGKQQQK 180

Query: 181 SPVKARASKSKLTQHHEVNVRKATSKK 207
           SPVKARASKSKLTQHHEVNVRKATSKK
Sbjct: 181 SPVKARASKSKLTQHHEVNVRKATSKK 207


>gi|4885379 histone cluster 1, H1e [Homo sapiens]
          Length = 219

 Score =  183 bits (465), Expect = 8e-47
 Identities = 117/219 (53%), Positives = 141/219 (64%), Gaps = 18/219 (8%)

Query: 1   MSETVPAASASAGVAAMEKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVG 60
           MSET PAA A+   A  EK P KK+ RK AG  +A RK     VS+LIT+A++ S+ER G
Sbjct: 1   MSETAPAAPAAPAPA--EKTPVKKKARKSAG--AAKRKASGPPVSELITKAVAASKERSG 56

Query: 61  MSLVALKKALAAAGYDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKST 120
           +SL ALKKALAAAGYDVEKNNSRIKL LKSLV+KG LVQT+GTGASGSFKL+KK      
Sbjct: 57  VSLAALKKALAAAGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEA 116

Query: 121 RSKAKKSVSAKTKKLVLSRDSKSPKTA-----------KTNKRAKKPRATT-PKTVRSGR 168
           + KAKK+ +AK KK   +  +K PK A           KT K+AKKP A    K  +S +
Sbjct: 117 KPKAKKAGAAKAKK--PAGAAKKPKKATGAATPKKSAKKTPKKAKKPAAAAGAKKAKSPK 174

Query: 169 KAKGAKGKQQQKSPVKARASKSKLTQHHEVNVRKATSKK 207
           KAK AK K+  KSP KA+A K K  +      + A  KK
Sbjct: 175 KAKAAKPKKAPKSPAKAKAVKPKAAKPKTAKPKAAKPKK 213


>gi|4885381 histone cluster 1, H1b [Homo sapiens]
          Length = 226

 Score =  173 bits (439), Expect = 8e-44
 Identities = 111/216 (51%), Positives = 138/216 (63%), Gaps = 12/216 (5%)

Query: 1   MSETVPAASASAGVAAMEKLPTKKRG-RKPAGLISASRKVPNLSVSKLITEALSVSQERV 59
           MSET PA +A+   A +EK P KK+  +K AG  +A RK     VS+LIT+A++ S+ER 
Sbjct: 1   MSETAPAETATP--APVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERN 58

Query: 60  GMSLVALKKALAAAGYDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKS 119
           G+SL ALKKALAA GYDVEKNNSRIKL LKSLV+KG LVQT+GTGASGSFKL+KK     
Sbjct: 59  GLSLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGE 118

Query: 120 TRSKAKKSVSAKTKKLVLSRDSKSPKTA-------KTNKRAKKPRAT-TPKTVRSGRKAK 171
            + KAKK+ +AK KK   +   K+ K A       KT K+AKKP A    K  +S +KAK
Sbjct: 119 AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAK 178

Query: 172 -GAKGKQQQKSPVKARASKSKLTQHHEVNVRKATSK 206
             AK K+  KSP K +A K K  +      + A  K
Sbjct: 179 AAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPK 214


>gi|4885373 histone cluster 1, H1a [Homo sapiens]
          Length = 215

 Score =  173 bits (438), Expect = 1e-43
 Identities = 113/213 (53%), Positives = 140/213 (65%), Gaps = 10/213 (4%)

Query: 1   MSETVPAASASAGVAAMEKLPTKKRGRKPAGLISASRKVP-NLSVSKLITEALSVSQERV 59
           MSETVP A A++  AA EK    K+ +KPA   +AS+K P   SVS+LI +A S S+ER 
Sbjct: 1   MSETVPPAPAAS--AAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERG 58

Query: 60  GMSLVALKKALAAAGYDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKS 119
           G+SL ALKKALAAAGYDVEKNNSRIKL +KSLV+KG LVQT+GTGASGSFKL+KK     
Sbjct: 59  GVSLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVE 118

Query: 120 TRSKAKKSVSAKTKKLVLSRDSK-----SPKTAKTNKRAKKPRATTPKTVRSGRKAKGAK 174
           T+  A K V+ KTK    S+  K     S K+ KT K+AKKP A T K+ ++ +K K  K
Sbjct: 119 TKPGASK-VATKTKATGASKKLKKATGASKKSVKTPKKAKKP-AATRKSSKNPKKPKTVK 176

Query: 175 GKQQQKSPVKARASKSKLTQHHEVNVRKATSKK 207
            K+  KSP KA+A K K  +      + A  KK
Sbjct: 177 PKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKK 209


>gi|4885375 histone cluster 1, H1c [Homo sapiens]
          Length = 213

 Score =  172 bits (436), Expect = 2e-43
 Identities = 116/220 (52%), Positives = 138/220 (62%), Gaps = 21/220 (9%)

Query: 1   MSETVPAASASAGVAAMEKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVG 60
           MSET PAA A+A  A  EK P KK+  K AG     RK     VS+LIT+A++ S+ER G
Sbjct: 1   MSETAPAAPAAAPPA--EKAPVKKKAAKKAG--GTPRKASGPPVSELITKAVAASKERSG 56

Query: 61  MSLVALKKALAAAGYDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKST 120
           +SL ALKKALAAAGYDVEKNNSRIKL LKSLV+KG LVQT+GTGASGSFKL+KK      
Sbjct: 57  VSLAALKKALAAAGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEA 116

Query: 121 RSKAKKSVSAKTKKLVLSRDSKSPKTA-----------KTNKRAKKPRA--TTPKTVRSG 167
           + K KK+   K KK V +  +K PK A           KT K+AKKP A   T K  +S 
Sbjct: 117 KPKVKKAGGTKPKKPVGA--AKKPKKAAGGATPKKSAKKTPKKAKKPAAATVTKKVAKSP 174

Query: 168 RKAKGAKGKQQQKSPVKARASKSKLTQHHEVNVRKATSKK 207
           +KAK AK K+  KS   A+A K K  +   V  +KA  KK
Sbjct: 175 KKAKVAKPKKAAKS--AAKAVKPKAAKPKVVKPKKAAPKK 212


>gi|4885377 histone cluster 1, H1d [Homo sapiens]
          Length = 221

 Score =  165 bits (418), Expect = 2e-41
 Identities = 107/220 (48%), Positives = 134/220 (60%), Gaps = 18/220 (8%)

Query: 1   MSETVPAASASAGVAAMEKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVG 60
           MSET P A      A  EK P KK+ +K AG  +  RK     VS+LIT+A++ S+ER G
Sbjct: 1   MSETAPLAPTIPAPA--EKTPVKKKAKK-AGATAGKRKASGPPVSELITKAVAASKERSG 57

Query: 61  MSLVALKKALAAAGYDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKST 120
           +SL ALKKALAAAGYDVEKNNSRIKL LKSLV+KG LVQT+GTGASGSFKL+KK      
Sbjct: 58  VSLAALKKALAAAGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEG 117

Query: 121 RSKAKKSVSAKTKKLVLSRDSKSPKTA-----------KTNKRAKKP--RATTPKTVRSG 167
           + KAKK+ +AK +K   +  +K PK             KT K+ KKP   A T K  +S 
Sbjct: 118 KPKAKKAGAAKPRK--PAGAAKKPKKVAGAATPKKSIKKTPKKVKKPATAAGTKKVAKSA 175

Query: 168 RKAKGAKGKQQQKSPVKARASKSKLTQHHEVNVRKATSKK 207
           +K K  + K+  KSP KA+A K K  +      +   +KK
Sbjct: 176 KKVKTPQPKKAAKSPAKAKAPKPKAAKPKSGKPKVTKAKK 215


>gi|4885371 H1 histone family, member 0 [Homo sapiens]
          Length = 194

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 6/195 (3%)

Query: 17  MEKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVGMSLVALKKALAAAGYD 76
           M +  T     KP    ++ +   +   S +I  A+   + R G S  +++K + +    
Sbjct: 1   MTENSTSAPAAKPKRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV 60

Query: 77  VEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKSTRSKAKKSVSAKTKKLV 136
            E  +S+IKLS+K LV  G+L QT+G GASGSF+L+K   PK  +S A K    + KK+ 
Sbjct: 61  GENADSQIKLSIKRLVTTGVLKQTKGVGASGSFRLAKSDEPK--KSVAFKKTKKEIKKVA 118

Query: 137 LSRDSKSPKTAKTNKRAKKPRATTPKTVRSGRKA---KGAKGKQQQKSPVKA-RASKSKL 192
             + +  PK A +    KKP+AT  K  +    A   K  K K  +  PVKA +  K+K 
Sbjct: 119 TPKKASKPKKAASKAPTKKPKATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKP 178

Query: 193 TQHHEVNVRKATSKK 207
            +    +  K   KK
Sbjct: 179 VKPKAKSSAKRAGKK 193


>gi|5174449 H1 histone family, member X [Homo sapiens]
          Length = 213

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 13/203 (6%)

Query: 1   MSETVPAASASAGVAAMEKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVG 60
           M++ V  A  SA ++  +K    K+  +P               S+L+ E +    ER G
Sbjct: 17  MAKKVTKAGGSAALSPSKKRKNSKKKNQPG------------KYSQLVVETIRRLGERNG 64

Query: 61  MSLVAL-KKALAAAGYDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKS 119
            SL  +  +A     +D +   + +K S+K+LV    L+Q +GTGA+GSFKL++K +   
Sbjct: 65  SSLAKIYTEAKKVPWFDQQNGRTYLKYSIKALVQNDTLLQVKGTGANGSFKLNRKKLEGG 124

Query: 120 TRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTVRSGRKAKGAKGKQQQ 179
              +   + +             +P  A + +  KKP        RS +K  GAK  +  
Sbjct: 125 GERRGAPAAATAPAPTAHKAKKAAPGAAGSRRADKKPARGQKPEQRSHKKGAGAKKDKGG 184

Query: 180 KSPVKARASKSKLTQHHEVNVRK 202
           K+   A A   K+ +  + +V K
Sbjct: 185 KAKKTAAAGGKKVKKAAKPSVPK 207


>gi|32401437 H1 histone family, member N, testis-specific [Homo
           sapiens]
          Length = 255

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 18/196 (9%)

Query: 1   MSETVPAASASAGVAAMEKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVG 60
           M+E    +  S G +A + LP +K    P+   S+S     L VS+L+ +A+S  +   G
Sbjct: 22  MAEAPGPSGESRGHSATQ-LPAEKTVGGPSRGCSSSV----LRVSQLVLQAISTHK---G 73

Query: 61  MSLVALKKALAAAGYDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIP--K 118
           ++L ALKK L  AGY+V + + R +        K  L++  G+ A+G F++ K   P  K
Sbjct: 74  LTLAALKKELRNAGYEVRRKSGRHEAPRGQA--KATLLRVSGSDAAGYFRVWKVPKPRRK 131

Query: 119 STRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTVRSGRKA-----KGA 173
             R++ ++   A  +     R S+  +     K A+K R    +  R+  KA     +  
Sbjct: 132 PGRARQEEGTRAPWRTPAAPRSSRR-RRQPLRKAARKAREVWRRNARAKAKANARARRTR 190

Query: 174 KGKQQQKSPVKARASK 189
           + + + K P  ARA +
Sbjct: 191 RARPRAKEPPCARAKE 206


>gi|56676330 HP1-BP74 [Homo sapiens]
          Length = 553

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 27/93 (29%), Positives = 54/93 (58%), Gaps = 2/93 (2%)

Query: 40  PNLSVSKLITEALSVSQERVGMSLVALKKALAAA--GYDVEKNNSRIKLSLKSLVNKGIL 97
           P   +  ++TEA+    ++ G S+VA++K +       ++E+    +K +LK  +N+G++
Sbjct: 157 PRPKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPSLELERRGYLLKQALKRELNRGVI 216

Query: 98  VQTRGTGASGSFKLSKKVIPKSTRSKAKKSVSA 130
            Q +G GASGSF + +K      +S+ +K+ S+
Sbjct: 217 KQVKGKGASGSFVVVQKSRKTPQKSRNRKNRSS 249



 Score = 32.0 bits (71), Expect = 0.38
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 7   AASASAGVAAMEKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVGMSLVAL 66
           A+ +   V    K P K R RK     SA    P + +  ++  A +   E    S   +
Sbjct: 224 ASGSFVVVQKSRKTPQKSRNRKNRS--SAVDPEPQVKLEDVLPLAFTRLCEPKEASYSLI 281

Query: 67  KKALAA--AGYDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSK 113
           +K ++       V+     +K +L+  V +G L Q  G GASG+F+L K
Sbjct: 282 RKYVSQYYPKLRVDIRPQLLKNALQRAVERGQLEQITGKGASGTFQLKK 330



 Score = 31.6 bits (70), Expect = 0.50
 Identities = 44/197 (22%), Positives = 66/197 (33%), Gaps = 33/197 (16%)

Query: 13  GVAAMEKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVGMSLVALKKALAA 72
           G  A      KK G KP  L+  S       +   I  A++   E    S  ALKK +  
Sbjct: 319 GKGASGTFQLKKSGEKP--LLGGSL------MEYAILSAIAAMNEPKTCSTTALKKYVLE 370

Query: 73  AGYDVEKNNSR--IKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIP------------- 117
                  N     +K +L+     G + Q  G G SG+F+L     P             
Sbjct: 371 NHPGTNSNYQMHLLKKTLQKCEKNGWMEQISGKGFSGTFQLCFPYYPSPGVLFPKKEPDD 430

Query: 118 ---------KSTRSKAKKSVSAKTKKLVLSRDSKSP-KTAKTNKRAKKPRATTPKTVRSG 167
                    +S+   ++       ++L     +KSP K A   +R  KP        R  
Sbjct: 431 SRDEDEDEDESSEEDSEDEEPPPKRRLQKKTPAKSPGKAASVKQRGSKPAPKVSAAQRGK 490

Query: 168 RKAKGAKGKQQQKSPVK 184
            +    K   + K+P K
Sbjct: 491 ARPLPKKAPPKAKTPAK 507



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 118 KSTRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTVRSGRKAKGA-KGK 176
           K   SK    VSA  +        K+P  AKT  +  +P +T  K    G   K A   +
Sbjct: 473 KQRGSKPAPKVSAAQRGKARPLPKKAPPKAKTPAKKTRPSSTVIKKPSGGSSKKPATSAR 532

Query: 177 QQQKSPVKARASKSK 191
           ++ K P K +++  K
Sbjct: 533 KEVKLPGKGKSTMKK 547


>gi|111548666 SNF2 histone linker PHD RING helicase isoform a [Homo
           sapiens]
          Length = 1687

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 47  LITEALSVSQERVGMSLVALKKALAAA-GYDVEKNNSRIKLSLKSLVNKGILVQTRGTGA 105
           +I  A+     + G+S++++ K +++   YDV++N S +K  LK L+ +G++ Q +G G 
Sbjct: 445 MILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNRSLLKRMLKCLIFEGLVKQIKGHGF 504

Query: 106 SGSFKLSKKVIPKSTRSKAKKSVSAKTKKL 135
           SG+F L K    +    K KK      +K+
Sbjct: 505 SGTFTLGKNYKEEDICDKTKKQAVGSPRKI 534


>gi|27436873 SNF2 histone linker PHD RING helicase isoform b [Homo
           sapiens]
          Length = 1659

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 47  LITEALSVSQERVGMSLVALKKALAAA-GYDVEKNNSRIKLSLKSLVNKGILVQTRGTGA 105
           +I  A+     + G+S++++ K +++   YDV++N S +K  LK L+ +G++ Q +G G 
Sbjct: 445 MILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNRSLLKRMLKCLIFEGLVKQIKGHGF 504

Query: 106 SGSFKLSKKVIPKSTRSKAKKSVSAKTKKL 135
           SG+F L K    +    K KK      +K+
Sbjct: 505 SGTFTLGKNYKEEDICDKTKKQAVGSPRKI 534


>gi|24475863 H1 histone family, member O, oocyte-specific [Homo
           sapiens]
          Length = 346

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 28/217 (12%)

Query: 2   SETVPAASASAGVAAM---EKLPTKKRGRKPAGLISASRKVPNLS--VSKLITEALSVSQ 56
           S+  P+++++AG +     EK      G  P G   +S  V      V +++ EAL   +
Sbjct: 8   SDISPSSTSTAGSSRSPESEKPGPSHGGVPPGGPSHSSLPVGRRHPPVLRMVLEALQAGE 67

Query: 57  ERVGMSLVALKKALAAA--GYDVEKNNSRIKLSLKSLVNKGILVQ---TRGTGASGSFKL 111
           +R G S+ A+K  +       DV +    +K +L + + +G+L +   ++  GA+GSFKL
Sbjct: 68  QRRGTSVAAIKLYILHKYPTVDVLRFKYLLKQALATGMRRGLLARPLNSKARGATGSFKL 127

Query: 112 ----SKKVIPK----STRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNKRAK--------- 154
                KK+ P+    +T  +       K  K         P   K  K AK         
Sbjct: 128 VPKHKKKIQPRKMAPATAPRRAGEAKGKGPKKPSEAKEDPPNVGKVKKAAKRPAKVQKPP 187

Query: 155 -KPRATTPKTVRSGRKAKGAKGKQQQKSPVKARASKS 190
            KP A T K  + G  AK  + +  +   V  +  K+
Sbjct: 188 PKPGAATEKARKQGGAAKDTRAQSGEARKVPPKPDKA 224



 Score = 28.1 bits (61), Expect = 5.5
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 26/105 (24%)

Query: 111 LSKKVIPKSTRSKA-------KKSVSAKTKKLVLSR---DSKSPKTAKTNKRAKKPRATT 160
           LS+K   K +RS         K    +K+ K   S+    + SP   K   +AK P+A  
Sbjct: 234 LSRKAKAKGSRSSQGDAEAYRKTKAESKSSKPTASKVKNGAASPTKKKVVAKAKAPKAGQ 293

Query: 161 PKTVRSGRKAKGA----------------KGKQQQKSPVKARASK 189
               ++   AKG+                KG ++   P+KA +SK
Sbjct: 294 GPNTKAAAPAKGSGSKVVPAHLSRKTEAPKGPRKAGLPIKASSSK 338


>gi|154354972 phosphatase and actin regulator 2 isoform 4 [Homo
           sapiens]
          Length = 554

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 12/154 (7%)

Query: 45  SKLITEALSVSQERVGMSLVALKKALAAAGYDV-----EKNNSRIKLSLKSLVNKGILVQ 99
           S ++   +S  Q R  +    + K L     DV       N   I +  +S   + ++  
Sbjct: 59  SAVLERKISTRQSREELIRRGVLKELPDQDGDVTVNFENSNGHMIPIGEESTREENVVKS 118

Query: 100 TRGTGASGSFKLSKKVIPKSTRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNKRAKKPRAT 159
             G G+     +S+K  P   +++ KK+ S+ +KK   S+ S SP T+ T+ R K  + T
Sbjct: 119 EEGNGS-----VSEKTPPLEEQAEDKKAGSSHSKKTTGSKASASPSTSSTSSRPKASKET 173

Query: 160 TPKTVRSGRKAKGAKGKQQQKSPVKARASKSKLT 193
                 +    KG   ++  K P+ +  S    T
Sbjct: 174 VSSKAGTVGTTKGK--RKTDKQPITSHLSSDTTT 205


>gi|154354970 phosphatase and actin regulator 2 isoform 2 [Homo
           sapiens]
          Length = 565

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 12/154 (7%)

Query: 45  SKLITEALSVSQERVGMSLVALKKALAAAGYDV-----EKNNSRIKLSLKSLVNKGILVQ 99
           S ++   +S  Q R  +    + K L     DV       N   I +  +S   + ++  
Sbjct: 70  SAVLERKISTRQSREELIRRGVLKELPDQDGDVTVNFENSNGHMIPIGEESTREENVVKS 129

Query: 100 TRGTGASGSFKLSKKVIPKSTRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNKRAKKPRAT 159
             G G+     +S+K  P   +++ KK+ S+ +KK   S+ S SP T+ T+ R K  + T
Sbjct: 130 EEGNGS-----VSEKTPPLEEQAEDKKAGSSHSKKTTGSKASASPSTSSTSSRPKASKET 184

Query: 160 TPKTVRSGRKAKGAKGKQQQKSPVKARASKSKLT 193
                 +    KG   ++  K P+ +  S    T
Sbjct: 185 VSSKAGTVGTTKGK--RKTDKQPITSHLSSDTTT 216


>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
          Length = 1020

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 12/178 (6%)

Query: 16  AMEKLPTKKRGRKPAGLISASR-KVPNLSVSKLITEALSVSQERVGMSLVALKKALAAAG 74
           A  K P K+  + PA + S  + K P    +K   +A S  +E    S    K  + A  
Sbjct: 616 AEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEA-KSPEKAKSPVKAEA 674

Query: 75  YDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKSTRSKAKKSVSAKTK- 133
              EK  S +K   KS       V+        +    K+      ++K+     AKT  
Sbjct: 675 KSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPE 734

Query: 134 --KLVLSRDSKSPKTAKTNKRA-----KKPRATTPKTVRSGRKAKGAKGKQQQKSPVK 184
             K  +  ++KSP+ AK+ ++A     K P A TP   +   ++   K  ++ KSPVK
Sbjct: 735 KAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTP--AKEEARSPADKFPEKAKSPVK 790



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 117 PKSTRSKAKKSVSAKTK-KLVLSRDSKSPKTAKTNKRAKKP---RATTPKTVRSGRKAKG 172
           P+  +S  K+   +  + K  +  ++KSP   K+ ++AK P    A +P+  +S  K + 
Sbjct: 601 PEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEE- 659

Query: 173 AKGKQQQKSPVKARA 187
           AK  ++ KSPVKA A
Sbjct: 660 AKSPEKAKSPVKAEA 674



 Score = 36.2 bits (82), Expect = 0.020
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 9/80 (11%)

Query: 117 PKSTRSKAKKSVSAKTK-KLVLSRDSKSPKTAKTNKRAKKP---RATTPKTVRSGRKAKG 172
           P+  +S AK+   +  + K     ++KSP   K+ ++AK P    A +P   +S  KAK 
Sbjct: 547 PEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKS 606

Query: 173 -----AKGKQQQKSPVKARA 187
                AK   + KSPVK  A
Sbjct: 607 PVKEEAKSPAEAKSPVKEEA 626



 Score = 35.8 bits (81), Expect = 0.026
 Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 13/173 (7%)

Query: 16  AMEKLPTKKRGRKPAGLISASR-KVPNLSVSKLITEALSVSQERVGMSLVALKKALAAAG 74
           A  K P K+  + PA + S  + K P    +K   EA S  +E    S   +K    A  
Sbjct: 528 AEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEA-KSPAEVKSPEKAKS 586

Query: 75  YDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKSTRSKAKKSVSAKTKK 134
              E+  S  +          +  + +    + S    +   P   +S  K     K   
Sbjct: 587 PAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTK--- 643

Query: 135 LVLSRDSKSPKTAKTNKRAKKPRATTPKTVRSGRKAKGAKGKQQQKSPVKARA 187
                ++KSP+ AK+    +K  A +P+  +S  KA+ AK  ++ KSPVKA A
Sbjct: 644 ----EEAKSPEKAKS---PEKEEAKSPEKAKSPVKAE-AKSPEKAKSPVKAEA 688



 Score = 32.7 bits (73), Expect = 0.22
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 9/99 (9%)

Query: 117 PKSTRSKAKKSVSAKTK-KLVLSRDSKSPKTAKTNKRAKKP---RATTPKTVRSGRKAKG 172
           P+   +K+   V +  K K     ++KSP  AK+ ++AK P    A +P   +S  K + 
Sbjct: 567 PEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEA 626

Query: 173 -----AKGKQQQKSPVKARASKSKLTQHHEVNVRKATSK 206
                 K  ++ KSP K  A   +  +  E    K+  K
Sbjct: 627 KSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEK 665



 Score = 29.3 bits (64), Expect = 2.5
 Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 6/101 (5%)

Query: 113 KKVIPKSTRSKAKKSVSAKTKKLVLSRDSKSPKTAKTN------KRAKKPRATTPKTVRS 166
           ++V  K    KA++  +  T K    +DSK  +  K        +  K+P    PK  + 
Sbjct: 831 QEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKV 890

Query: 167 GRKAKGAKGKQQQKSPVKARASKSKLTQHHEVNVRKATSKK 207
             K + A+ K++  +P K   +K ++ +  +   +   +KK
Sbjct: 891 EAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKK 931


>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
           sapiens]
          Length = 2997

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 8/103 (7%)

Query: 104 GASGSFKLSKKVIPKSTRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKT 163
           G   + +L++  +  S   K KK  S K KK     D K PK  K  K  K+P+  TPK 
Sbjct: 622 GGVDNQELNRNSLDGSQEEKKKKKRS-KAKK-----DPKEPKEPKEKKEPKEPK--TPKA 673

Query: 164 VRSGRKAKGAKGKQQQKSPVKARASKSKLTQHHEVNVRKATSK 206
            +  ++ K  K K     P  ++ S +K        ++K  +K
Sbjct: 674 PKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSEASALKKKVNK 716


>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
            [Homo sapiens]
          Length = 1412

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 15/154 (9%)

Query: 18   EKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVGMSLVALKKALAAAGYDV 77
            E    K  G +PA     S+K   L   +      SVS E+   +     K   A+G DV
Sbjct: 1267 ESRKRKLSGDQPAARTPRSKKKKKLGAGE--GGEASVSPEKTSTTSKGKAKRDKASG-DV 1323

Query: 78   EKNNSRIKLSLKSL-------VNKGILVQTRGTGASGSFKLSKKVIPKSTRSKAKKSVSA 130
            ++   +  L  +         + KG+     G  ++   K  KK   K  + K KK    
Sbjct: 1324 KEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKK 1383

Query: 131  KTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTV 164
            K KK   ++DS+SP    + K+ KK + T  +TV
Sbjct: 1384 KAKK-ASTKDSESP----SQKKKKKKKKTAEQTV 1412


>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
            [Homo sapiens]
          Length = 1451

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 15/154 (9%)

Query: 18   EKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVGMSLVALKKALAAAGYDV 77
            E    K  G +PA     S+K   L   +      SVS E+   +     K   A+G DV
Sbjct: 1306 ESRKRKLSGDQPAARTPRSKKKKKLGAGE--GGEASVSPEKTSTTSKGKAKRDKASG-DV 1362

Query: 78   EKNNSRIKLSLKSL-------VNKGILVQTRGTGASGSFKLSKKVIPKSTRSKAKKSVSA 130
            ++   +  L  +         + KG+     G  ++   K  KK   K  + K KK    
Sbjct: 1363 KEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKK 1422

Query: 131  KTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTV 164
            K KK   ++DS+SP    + K+ KK + T  +TV
Sbjct: 1423 KAKK-ASTKDSESP----SQKKKKKKKKTAEQTV 1451


>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
            [Homo sapiens]
          Length = 1488

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 15/154 (9%)

Query: 18   EKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVGMSLVALKKALAAAGYDV 77
            E    K  G +PA     S+K   L   +      SVS E+   +     K   A+G DV
Sbjct: 1343 ESRKRKLSGDQPAARTPRSKKKKKLGAGE--GGEASVSPEKTSTTSKGKAKRDKASG-DV 1399

Query: 78   EKNNSRIKLSLKSL-------VNKGILVQTRGTGASGSFKLSKKVIPKSTRSKAKKSVSA 130
            ++   +  L  +         + KG+     G  ++   K  KK   K  + K KK    
Sbjct: 1400 KEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKK 1459

Query: 131  KTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTV 164
            K KK   ++DS+SP    + K+ KK + T  +TV
Sbjct: 1460 KAKK-ASTKDSESP----SQKKKKKKKKTAEQTV 1488


>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b [Homo
            sapiens]
          Length = 1411

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 15/154 (9%)

Query: 18   EKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVGMSLVALKKALAAAGYDV 77
            E    K  G +PA     S+K   L   +      SVS E+   +     K   A+G DV
Sbjct: 1266 ESRKRKLSGDQPAARTPRSKKKKKLGAGE--GGEASVSPEKTSTTSKGKAKRDKASG-DV 1322

Query: 78   EKNNSRIKLSLKSL-------VNKGILVQTRGTGASGSFKLSKKVIPKSTRSKAKKSVSA 130
            ++   +  L  +         + KG+     G  ++   K  KK   K  + K KK    
Sbjct: 1323 KEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKK 1382

Query: 131  KTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTV 164
            K KK   ++DS+SP    + K+ KK + T  +TV
Sbjct: 1383 KAKK-ASTKDSESP----SQKKKKKKKKTAEQTV 1411


>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a [Homo
            sapiens]
          Length = 1450

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 15/154 (9%)

Query: 18   EKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVGMSLVALKKALAAAGYDV 77
            E    K  G +PA     S+K   L   +      SVS E+   +     K   A+G DV
Sbjct: 1305 ESRKRKLSGDQPAARTPRSKKKKKLGAGE--GGEASVSPEKTSTTSKGKAKRDKASG-DV 1361

Query: 78   EKNNSRIKLSLKSL-------VNKGILVQTRGTGASGSFKLSKKVIPKSTRSKAKKSVSA 130
            ++   +  L  +         + KG+     G  ++   K  KK   K  + K KK    
Sbjct: 1362 KEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKK 1421

Query: 131  KTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTV 164
            K KK   ++DS+SP    + K+ KK + T  +TV
Sbjct: 1422 KAKK-ASTKDSESP----SQKKKKKKKKTAEQTV 1450


>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
          Length = 2468

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)

Query: 113 KKVIPKSTRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNKRAK---KPRATTPKTVRSGRK 169
           +KV+ K  +    ++  + T+K V S++  SP  A+  ++     KP+A   KTV+   K
Sbjct: 584 EKVMVKKDKPIKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETK 643

Query: 170 AKGAKGKQQQKSPVKARASKSKLT 193
            K    K++++ P K  A K   T
Sbjct: 644 VKPEDKKEEKEKPKKEVAKKEDKT 667



 Score = 35.0 bits (79), Expect = 0.045
 Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 15/100 (15%)

Query: 110 KLSKKVIPKSTRSK-AKKSVSAKTKKLVLSRD-------SKSPKTAKTN----KRAKKPR 157
           K  KK + K T  K  KK V  + KK V   +        K PK AK +      AKKP 
Sbjct: 694 KEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPA 753

Query: 158 ATTPKTVR---SGRKAKGAKGKQQQKSPVKARASKSKLTQ 194
           A  PK  +   S +K   A GK ++K  +K    + K  +
Sbjct: 754 ALKPKVPKKEESVKKDSVAAGKPKEKGKIKVIKKEGKAAE 793



 Score = 32.7 bits (73), Expect = 0.22
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 2/110 (1%)

Query: 84   IKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKSTRSKAKKSVSAKTKKLVLSRDSKS 143
            I+ +L   + K +  +T+ T   G+   S   + KS       + S K   L  S D  S
Sbjct: 2227 IEQNLGKALKKDLKEKTK-TKKPGTKTKSSSPVKKSDGKSKPLAASPKPAGLKESSDKVS 2285

Query: 144  PKTAKTNKRAKKPRATTPKTVRSGRKAKGAKGKQQQKSPVKARASKSKLT 193
             + A   K+    +A  P T    + A+G +  ++ K+   A ASKS  T
Sbjct: 2286 -RVASPKKKESVEKAAKPTTTPEVKAARGEEKDKETKNAANASASKSAKT 2334



 Score = 27.3 bits (59), Expect = 9.4
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 13/97 (13%)

Query: 113 KKVIPKSTRSKA--KKSVSAKTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTVRSGRKA 170
           +K + K T+ K   KK    K KK V  ++ K+P      K+ +KP+    K     ++ 
Sbjct: 635 EKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPI-----KKEEKPKKEEVK-----KEV 684

Query: 171 KGAKGKQQQKSPVKARASKSKLTQHHEVNVRKATSKK 207
           K    K+++K P K    K    +  +  V+K   K+
Sbjct: 685 KKEIKKEEKKEP-KKEVKKETPPKEVKKEVKKEEKKE 720


>gi|169218320 PREDICTED: similar to BCL2-associated transcription
           factor 1 isoform 2 [Homo sapiens]
          Length = 869

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 22/83 (26%), Positives = 50/83 (60%), Gaps = 5/83 (6%)

Query: 120 TRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNK-RAKKPRATTPKTVRSG---RKAKGAKG 175
           +RS  ++SVS++  +    R  +S ++ +++  R+  P + +P + R G   ++ K A+G
Sbjct: 110 SRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEG 169

Query: 176 KQQQKSPVKARASKS-KLTQHHE 197
           + Q++SP+K+++ +  K T  H+
Sbjct: 170 EPQEESPLKSKSQEEPKDTFEHD 192


>gi|117938254 BCL2-associated transcription factor 1 isoform 3 [Homo
           sapiens]
          Length = 747

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 22/83 (26%), Positives = 50/83 (60%), Gaps = 5/83 (6%)

Query: 120 TRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNK-RAKKPRATTPKTVRSG---RKAKGAKG 175
           +RS  ++SVS++  +    R  +S ++ +++  R+  P + +P + R G   ++ K A+G
Sbjct: 112 SRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEG 171

Query: 176 KQQQKSPVKARASKS-KLTQHHE 197
           + Q++SP+K+++ +  K T  H+
Sbjct: 172 EPQEESPLKSKSQEEPKDTFEHD 194


>gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo
           sapiens]
          Length = 869

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 22/83 (26%), Positives = 50/83 (60%), Gaps = 5/83 (6%)

Query: 120 TRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNK-RAKKPRATTPKTVRSG---RKAKGAKG 175
           +RS  ++SVS++  +    R  +S ++ +++  R+  P + +P + R G   ++ K A+G
Sbjct: 110 SRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEG 169

Query: 176 KQQQKSPVKARASKS-KLTQHHE 197
           + Q++SP+K+++ +  K T  H+
Sbjct: 170 EPQEESPLKSKSQEEPKDTFEHD 192


>gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo
           sapiens]
          Length = 920

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 22/83 (26%), Positives = 50/83 (60%), Gaps = 5/83 (6%)

Query: 120 TRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNK-RAKKPRATTPKTVRSG---RKAKGAKG 175
           +RS  ++SVS++  +    R  +S ++ +++  R+  P + +P + R G   ++ K A+G
Sbjct: 112 SRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEG 171

Query: 176 KQQQKSPVKARASKS-KLTQHHE 197
           + Q++SP+K+++ +  K T  H+
Sbjct: 172 EPQEESPLKSKSQEEPKDTFEHD 194


>gi|51317366 myosin XVIIIB [Homo sapiens]
          Length = 2567

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 47/197 (23%), Positives = 76/197 (38%), Gaps = 19/197 (9%)

Query: 5   VPAASASAGVAAMEKLPTKKRGRKPAGLISASRKVPNLSVSKLITEALSVSQERVGMSLV 64
           +P       V   EK   + R RK   + S  R++P +S+S+    + S S  R G   +
Sbjct: 33  IPGGFIKQLVRGTEKEAKEARQRKQLAVASPEREIPEISISQ--PNSKSSSGTRSGSQQI 90

Query: 65  ALKKALAAAG----YDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKST 120
           +     ++ G       E   SR     +     G   Q  G+ A+     +KK +P   
Sbjct: 91  SQDDQSSSPGSSDILGKESEGSRSPDPEQMTSINGEKAQELGSSATP----TKKTVP-FK 145

Query: 121 RSKAKKSVSAKTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTVRSGRKAKGAKGKQQQK 180
           R   +  V     KL    D  S K  KT+     P  T+P    +G++ KG    +  +
Sbjct: 146 RGVRRGDVLLMVAKL----DPDSAKPEKTHPHDAPPCKTSPPATDTGKEKKG----ETSR 197

Query: 181 SPVKARASKSKLTQHHE 197
           +P  ++AS   L    E
Sbjct: 198 TPCGSQASTEILAPKAE 214


>gi|239756568 PREDICTED: similar to BCL2-associated transcription
           factor 1 [Homo sapiens]
          Length = 869

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 22/83 (26%), Positives = 50/83 (60%), Gaps = 5/83 (6%)

Query: 120 TRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNK-RAKKPRATTPKTVRSG---RKAKGAKG 175
           +RS  ++SVS++  +    R  +S ++ +++  R+  P + +P + R G   ++ K A+G
Sbjct: 110 SRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEG 169

Query: 176 KQQQKSPVKARASKS-KLTQHHE 197
           + Q++SP+K+++ +  K T  H+
Sbjct: 170 ELQEESPLKSKSQEEPKDTFEHD 192


>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
           sapiens]
          Length = 805

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 11/85 (12%)

Query: 106 SGSFKLSKKVIPKSTRSKAKKSVSAKTKKLVLS-----RDSKSPKTAKTNKRAKKPRATT 160
           S S  +S K+I   +R  +KKS +  +KK   S       S+SP ++K  K+AKKP+ + 
Sbjct: 722 SRSGSISVKIIRHDSRQDSKKSTTKDSKKHSGSDSSGRSSSESPGSSK-EKKAKKPKHSR 780

Query: 161 PKTV----RSGRKAKGAKGKQQQKS 181
            ++V    RSG+KA   K K + +S
Sbjct: 781 SRSVEKSQRSGKKA-SRKHKSKSRS 804



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 4/91 (4%)

Query: 116 IPKSTRSKAKKSVSAKTKKLVLSRDSKSPKTAKTNKRAKKPRATTPKTVRSGRKAKGAKG 175
           + +   S+   S S      ++  DS+      T K +KK   +      SGR +  + G
Sbjct: 711 LKRKRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDSKKHSGSD----SSGRSSSESPG 766

Query: 176 KQQQKSPVKARASKSKLTQHHEVNVRKATSK 206
             ++K   K + S+S+  +  + + +KA+ K
Sbjct: 767 SSKEKKAKKPKHSRSRSVEKSQRSGKKASRK 797


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.304    0.117    0.295 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,061,458
Number of Sequences: 37866
Number of extensions: 223186
Number of successful extensions: 1500
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 1179
Number of HSP's gapped (non-prelim): 383
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.