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Search of human proteins with 113427091
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113427091 PREDICTED: hypothetical protein [Homo sapiens]
(211 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113427091 PREDICTED: hypothetical protein [Homo sapiens] 460 e-130
gi|169211552 PREDICTED: hypothetical protein [Homo sapiens] 458 e-129
gi|124430557 a disintegrin-like and metalloprotease with thrombo... 33 0.14
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 33 0.18
gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo ... 32 0.30
gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo ... 32 0.39
gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo ... 32 0.39
gi|169210827 PREDICTED: hypothetical protein [Homo sapiens] 32 0.51
gi|13128992 hypothetical protein MGC2803 [Homo sapiens] 30 1.5
gi|40254982 hypothetical protein LOC83641 [Homo sapiens] 30 2.0
gi|195927017 phosphatidylinositol transfer protein, membrane-ass... 30 2.0
gi|195927015 phosphatidylinositol transfer protein, membrane-ass... 30 2.0
gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo ... 29 2.6
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 29 2.6
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap... 29 2.6
gi|222831614 hypothetical protein LOC388963 [Homo sapiens] 29 3.3
gi|239753576 PREDICTED: hypothetical protein [Homo sapiens] 29 3.3
gi|239748084 PREDICTED: hypothetical protein [Homo sapiens] 29 3.3
gi|239741982 PREDICTED: hypothetical protein [Homo sapiens] 29 3.3
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 29 3.3
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 29 3.3
gi|113416994 PREDICTED: hypothetical protein [Homo sapiens] 28 4.4
gi|113416470 PREDICTED: hypothetical protein [Homo sapiens] 28 4.4
gi|38683827 ADAM metallopeptidase with thrombospondin type 1 mot... 28 4.4
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 28 4.4
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 28 5.7
gi|169167740 PREDICTED: hypothetical protein [Homo sapiens] 28 5.7
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ... 28 5.7
gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ... 28 5.7
gi|14165278 hypothetical protein LOC84418 [Homo sapiens] 28 7.4
>gi|113427091 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 460 bits (1183), Expect = e-130
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MPLLQEPTAGLKAVHMPGFLEHQRQEEGSWGTWSRMPFPRINVGLPEALHLQGATLSHIP 60
MPLLQEPTAGLKAVHMPGFLEHQRQEEGSWGTWSRMPFPRINVGLPEALHLQGATLSHIP
Sbjct: 1 MPLLQEPTAGLKAVHMPGFLEHQRQEEGSWGTWSRMPFPRINVGLPEALHLQGATLSHIP 60
Query: 61 RPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTSR 120
RPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTSR
Sbjct: 61 RPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTSR 120
Query: 121 HPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWCMGRGLWAVGAASGL 180
HPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWCMGRGLWAVGAASGL
Sbjct: 121 HPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWCMGRGLWAVGAASGL 180
Query: 181 QERNLEEGILAWQKVVGSAPNCTCSHQALCI 211
QERNLEEGILAWQKVVGSAPNCTCSHQALCI
Sbjct: 181 QERNLEEGILAWQKVVGSAPNCTCSHQALCI 211
>gi|169211552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 458 bits (1178), Expect = e-129
Identities = 210/211 (99%), Positives = 210/211 (99%)
Query: 1 MPLLQEPTAGLKAVHMPGFLEHQRQEEGSWGTWSRMPFPRINVGLPEALHLQGATLSHIP 60
MPLLQEPTAGLKAVHMPGFLEHQRQEEGSWGTWSRMPFPRINVGLPEALHLQGATLSHIP
Sbjct: 1 MPLLQEPTAGLKAVHMPGFLEHQRQEEGSWGTWSRMPFPRINVGLPEALHLQGATLSHIP 60
Query: 61 RPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTSR 120
RPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGT R
Sbjct: 61 RPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTPR 120
Query: 121 HPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWCMGRGLWAVGAASGL 180
HPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWCMGRGLWAVGAASGL
Sbjct: 121 HPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWCMGRGLWAVGAASGL 180
Query: 181 QERNLEEGILAWQKVVGSAPNCTCSHQALCI 211
QERNLEEGILAWQKVVGSAPNCTCSHQALCI
Sbjct: 181 QERNLEEGILAWQKVVGSAPNCTCSHQALCI 211
>gi|124430557 a disintegrin-like and metalloprotease with
thrombospondin type 1 motifs 20 [Homo sapiens]
Length = 1910
Score = 33.5 bits (75), Expect = 0.14
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 57 SHIPRPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVAC 101
+H+PRP+ W F C W G D S S+ G G+ QV C
Sbjct: 1193 AHLPRPAEIWDCFTPCGEWQAG---DWSPCSASCGHGKTTRQVLC 1234
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 33.1 bits (74), Expect = 0.18
Identities = 31/99 (31%), Positives = 34/99 (34%), Gaps = 9/99 (9%)
Query: 60 PRPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTS 119
PRP A SS G W G GE RGT P E+
Sbjct: 621 PRPFPAQSSAS-------GSFLLSGWDPEGRGAGETLAGDPAEVLGERGTAPWVEEEEEE 673
Query: 120 RHPELPGMDD--MGGTGVRGLQLGCPMAQPEGNISQLPL 156
PG D +GG R L CP+ EG S LPL
Sbjct: 674 EEGSSPGEDSSSLGGGPSRRGPLPCPLCSREGACSCLPL 712
>gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 32.3 bits (72), Expect = 0.30
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 107 RGTQPSGAEKGTSRHPELPGMDDM-----GGTGVRGLQLGCPMAQPEGNISQLPLVLWHP 161
R QP+G E +HP+ P G G R L P P+G++ + L HP
Sbjct: 125 RTAQPAGFELLAWQHPQKPPGGPQRPSPGGLRGPRSLSGSSPWRGPQGSLCKSGLCCAHP 184
Query: 162 RR---DWCMGRGLW----------AVGAASG 179
R G G+W AVGAA+G
Sbjct: 185 VRPAGHLACGAGIWTRAQAGPHKRAVGAAAG 215
>gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 32.0 bits (71), Expect = 0.39
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 107 RGTQPSGAEKGTSRHPELPGMDDM-----GGTGVRGLQLGCPMAQPEGNISQLPLVLWHP 161
R QP+G E +HP+ P G G R L P P+G++ + L HP
Sbjct: 125 RTAQPAGFELLAWQHPQKPPGGPQRPSPGGLRGPRSLSGSSPWRGPQGSLCKSGLCCAHP 184
Query: 162 RR---DWCMGRGLW----------AVGAASG 179
R G G+W AVGAA+G
Sbjct: 185 VRPAGHVACGAGIWTRAQAGPHKRAVGAAAG 215
>gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 32.0 bits (71), Expect = 0.39
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 107 RGTQPSGAEKGTSRHPELPGMDDM-----GGTGVRGLQLGCPMAQPEGNISQLPLVLWHP 161
R QP+G E +HP+ P G G R L P P+G++ + L HP
Sbjct: 125 RTAQPAGFELLAWQHPQKPPGGPQRPSPGGLRGPRSLSGSSPWRGPQGSLCKSGLCCAHP 184
Query: 162 RR---DWCMGRGLW----------AVGAASG 179
R G G+W AVGAA+G
Sbjct: 185 VRPAGHVACGAGIWTRAQAGPHKRAVGAAAG 215
>gi|169210827 PREDICTED: hypothetical protein [Homo sapiens]
Length = 139
Score = 31.6 bits (70), Expect = 0.51
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 41 INVGLPEALHLQGATLSHIPRPSRAWS-SFPCCCLWDLGGGFDKS---------WSSSVG 90
+ +G +L ++G + + + SR +S S P CC+ LG G D S W VG
Sbjct: 1 MRLGCSPSLAVEG--MPRLAQESRVFSGSTPICCVI-LGPGRDPSGLCYWRKGKWLGRVG 57
Query: 91 GEGEIQGQVACSPAWGRGTQPSGAEKGTSRHPELPGMDDMG 131
+ + G + WG+ G G+S +P G
Sbjct: 58 PQPSLPGGLRVGGLWGKARAGPGESLGSSLVNRVPSSQSRG 98
>gi|13128992 hypothetical protein MGC2803 [Homo sapiens]
Length = 176
Score = 30.0 bits (66), Expect = 1.5
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 90 GGEGEIQGQVACSPAWGRGTQPSGAEKGTSRHPELPGMDDMGGTGVRGLQLGCPMAQPEG 149
G E QG+ A PA G G AE G+ PE G +++ G G + G + +G
Sbjct: 5 GRRAEPQGREAPGPAGGGGGGSRWAESGSGTSPE-SGDEEVSGAGSSPVSGGVNLFANDG 63
Query: 150 NISQL 154
+ +L
Sbjct: 64 SFLEL 68
>gi|40254982 hypothetical protein LOC83641 [Homo sapiens]
Length = 306
Score = 29.6 bits (65), Expect = 2.0
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 8/65 (12%)
Query: 62 PSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTSRH 121
PSR+ FPC L G +S S + G + V P G QP RH
Sbjct: 15 PSRSMHPFPCSALLACFGNTRESASFNQSGVADTHSTVRVQPVAKAGRQP--------RH 66
Query: 122 PELPG 126
P G
Sbjct: 67 PSAEG 71
>gi|195927017 phosphatidylinositol transfer protein,
membrane-associated isoform b [Homo sapiens]
Length = 1243
Score = 29.6 bits (65), Expect = 2.0
Identities = 40/137 (29%), Positives = 51/137 (37%), Gaps = 28/137 (20%)
Query: 52 QGATLSHIPRPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQP 111
QGA + I R ++A+S+F G GF + G G I G A + GT
Sbjct: 529 QGAVATVIARTNQAYSAF---LRSPEGAGFCGQVALIGDGVGGILGFDALCHSANAGTGS 585
Query: 112 SGAEKGTSRH-----PELPGMDDMGGTGVRGLQLGCP-------------MAQPEGNISQ 153
G+ + S + PE + D GV GL G P MA PE SQ
Sbjct: 586 RGSSRRGSMNNELLSPEFGPVRDPLADGVEGLGRGSPEPSALPPQRIPSDMASPEPEGSQ 645
Query: 154 LPLVL-------WHPRR 163
L W PRR
Sbjct: 646 NSLQAAPATTSSWEPRR 662
>gi|195927015 phosphatidylinositol transfer protein,
membrane-associated isoform a [Homo sapiens]
Length = 1244
Score = 29.6 bits (65), Expect = 2.0
Identities = 40/137 (29%), Positives = 51/137 (37%), Gaps = 28/137 (20%)
Query: 52 QGATLSHIPRPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQP 111
QGA + I R ++A+S+F G GF + G G I G A + GT
Sbjct: 529 QGAVATVIARTNQAYSAF---LRSPEGAGFCGQVALIGDGVGGILGFDALCHSANAGTGS 585
Query: 112 SGAEKGTSRH-----PELPGMDDMGGTGVRGLQLGCP-------------MAQPEGNISQ 153
G+ + S + PE + D GV GL G P MA PE SQ
Sbjct: 586 RGSSRRGSMNNELLSPEFGPVRDPLADGVEGLGRGSPEPSALPPQRIPSDMASPEPEGSQ 645
Query: 154 LPLVL-------WHPRR 163
L W PRR
Sbjct: 646 NSLQAAPATTSSWEPRR 662
>gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo
sapiens]
Length = 800
Score = 29.3 bits (64), Expect = 2.6
Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 31/148 (20%)
Query: 35 RMPFPRINVGLPEALHLQGATLSHIPRPSRAWSSFPC------CCLWDLGGGFDKSWSSS 88
R+P PR L A H G P P R S+ PC CLW + G + S
Sbjct: 295 RLP-PRSPPRLGRAPHFNGPPAH--PGPGRP-STSPCPLPPSLLCLW-VESGTPRGRQSL 349
Query: 89 VGGEGEIQGQ----VACSPAWGRGTQPSGAEKGTSRHPE-----------LPGMDDMGGT 133
G GQ V +P G + +G E+G+ E PG+ + GGT
Sbjct: 350 AEGVKRDGGQGLPDVEGAPDMGSSGEGAGLEEGSPLRRERAWPPPSLRTPTPGLTEGGGT 409
Query: 134 GV-----RGLQLGCPMAQPEGNISQLPL 156
G+ RG + P+G++ + L
Sbjct: 410 GLPSKQRRGPSPKTELGGPQGSLGRASL 437
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 29.3 bits (64), Expect = 2.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 92 EGEIQGQVACSPAWGRGTQPSGAEKGTSRHPELPGMDD 129
EGE++G+V G G + G E+G R E G ++
Sbjct: 1018 EGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEEN 1055
>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sapiens]
Length = 2365
Score = 29.3 bits (64), Expect = 2.6
Identities = 16/39 (41%), Positives = 19/39 (48%)
Query: 82 DKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTSR 120
++SWSS GG G P+ G P GA GTSR
Sbjct: 1444 ERSWSSQEGGLGPGGWWGCGEPSLGAAKAPEGAWGGTSR 1482
>gi|222831614 hypothetical protein LOC388963 [Homo sapiens]
Length = 588
Score = 28.9 bits (63), Expect = 3.3
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 13/86 (15%)
Query: 85 WSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTSRHPELPGMDDMGGTGVRGLQLGCPM 144
W EGE VA P WG +PS + +P + G+ Q
Sbjct: 105 WRFLARDEGE--SAVAEDPTWGEDEEPSACTTDSWAQGSVPVLHASTSEGLENFQ----- 157
Query: 145 AQPEGNISQLPLVLWHPRRDWCMGRG 170
+ G + ++PL R W MGRG
Sbjct: 158 GEDPGGVDRIPL-----GRSW-MGRG 177
>gi|239753576 PREDICTED: hypothetical protein [Homo sapiens]
Length = 423
Score = 28.9 bits (63), Expect = 3.3
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 18/70 (25%)
Query: 111 PSGAEKGTSRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLW-HPRRDWC--M 167
PSGAE T LP GG+G RGL+ P LW H + C
Sbjct: 237 PSGAEAATLAGVRLPPPPGCGGSGARGLR---------------PEQLWSHVQHARCPQP 281
Query: 168 GRGLWAVGAA 177
GRG A GAA
Sbjct: 282 GRGPDASGAA 291
>gi|239748084 PREDICTED: hypothetical protein [Homo sapiens]
Length = 423
Score = 28.9 bits (63), Expect = 3.3
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 18/70 (25%)
Query: 111 PSGAEKGTSRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLW-HPRRDWC--M 167
PSGAE T LP GG+G RGL+ P LW H + C
Sbjct: 237 PSGAEAATLAGVRLPPPPGCGGSGARGLR---------------PEQLWSHVQHARCPQP 281
Query: 168 GRGLWAVGAA 177
GRG A GAA
Sbjct: 282 GRGPDASGAA 291
>gi|239741982 PREDICTED: hypothetical protein [Homo sapiens]
Length = 423
Score = 28.9 bits (63), Expect = 3.3
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 18/70 (25%)
Query: 111 PSGAEKGTSRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLW-HPRRDWC--M 167
PSGAE T LP GG+G RGL+ P LW H + C
Sbjct: 237 PSGAEAATLAGVRLPPPPGCGGSGARGLR---------------PEQLWSHVQHARCPQP 281
Query: 168 GRGLWAVGAA 177
GRG A GAA
Sbjct: 282 GRGPDASGAA 291
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 28.9 bits (63), Expect = 3.3
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 98 QVACSPAWGRGTQPSGAEKG----TSRHPELPGMDDMGGTG 134
+ A PAW RG P GAE+ T PE P + GG+G
Sbjct: 2381 EAAACPAWERGAWPEGAERSSRPDTLLSPEQP-VCPAGGSG 2420
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 28.9 bits (63), Expect = 3.3
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%)
Query: 92 EGEIQGQVA-CSPAWGRGTQPSGAEKGTSRHPELPGMDDMGGTGVRGLQLGCPMAQPEG 149
EG + Q A C P WG+ QP E PG GG+ + GC AQP G
Sbjct: 404 EGPPEPQAAGCRPQWGKPAQPK---------LEGPGAPTQGGS--KEAPAGCSDAQPVG 451
>gi|113416994 PREDICTED: hypothetical protein [Homo sapiens]
Length = 302
Score = 28.5 bits (62), Expect = 4.4
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 81 FDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSG-AEKGTSRHPE 123
F ++W +S E +G A P WG GT+ G + S+HPE
Sbjct: 137 FPQAWKASRAKEP--RGLPAQRPTWGPGTRSRGPPRRARSQHPE 178
>gi|113416470 PREDICTED: hypothetical protein [Homo sapiens]
Length = 302
Score = 28.5 bits (62), Expect = 4.4
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 81 FDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSG-AEKGTSRHPE 123
F ++W +S E +G A P WG GT+ G + S+HPE
Sbjct: 137 FPQAWKASRAKEP--RGLPAQRPTWGPGTRSRGPPRRARSQHPE 178
>gi|38683827 ADAM metallopeptidase with thrombospondin type 1 motif,
7 preproprotein [Homo sapiens]
Length = 1686
Score = 28.5 bits (62), Expect = 4.4
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Query: 42 NVGLPEALHLQGATLSHIPRP---SRAWSSFPCCCLWDLGGGFDKSWS--SSVGGEGEIQ 96
+VGL E L+ H+PRP + PC W +G +WS S GEG +
Sbjct: 910 SVGLDEQSALEPPACEHLPRPPTETPCNRHVPCPATWAVG-----NWSQCSVTCGEGTQR 964
Query: 97 GQVACS 102
V C+
Sbjct: 965 RNVLCT 970
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 28.5 bits (62), Expect = 4.4
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 12/86 (13%)
Query: 78 GGGFDKSWSSSVGGEGEIQGQVAC--SPAWGRGTQPSGAEKGTSRHPEL---------PG 126
GGG + GG G G +C +P+ R ++PS + HP +
Sbjct: 2304 GGGGSGGGGAPSGGSGHSGGPSSCGGAPSTSR-SRPSRIPQPVRHHPPVLVSSAASSQAE 2362
Query: 127 MDDMGGTGVRGLQLGCPMAQPEGNIS 152
D M GT G L P A PE S
Sbjct: 2363 ADKMSGTSTPGPSLPPPGAAPEAGPS 2388
>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 28.1 bits (61), Expect = 5.7
Identities = 19/61 (31%), Positives = 23/61 (37%)
Query: 103 PAWGRGTQPSGAEKGTSRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPR 162
P G SG +G+ R P+ G GG+G G P S LP PR
Sbjct: 227 PGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPR 286
Query: 163 R 163
R
Sbjct: 287 R 287
>gi|169167740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 302
Score = 28.1 bits (61), Expect = 5.7
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 81 FDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSG-AEKGTSRHPE 123
F ++W +S E +G A P WG GT+ G + S+HPE
Sbjct: 137 FPQAWKASRAKEP--RGLPAQRPTWGPGTRSRGPPRQARSQHPE 178
>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
sapiens]
Length = 336
Score = 28.1 bits (61), Expect = 5.7
Identities = 19/61 (31%), Positives = 23/61 (37%)
Query: 103 PAWGRGTQPSGAEKGTSRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPR 162
P G SG +G+ R P+ G GG+G G P S LP PR
Sbjct: 227 PGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPR 286
Query: 163 R 163
R
Sbjct: 287 R 287
>gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
sapiens]
Length = 321
Score = 28.1 bits (61), Expect = 5.7
Identities = 19/61 (31%), Positives = 23/61 (37%)
Query: 103 PAWGRGTQPSGAEKGTSRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPR 162
P G SG +G+ R P+ G GG+G G P S LP PR
Sbjct: 227 PGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPR 286
Query: 163 R 163
R
Sbjct: 287 R 287
>gi|14165278 hypothetical protein LOC84418 [Homo sapiens]
Length = 97
Score = 27.7 bits (60), Expect = 7.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 66 WSSFPCCCLWDL 77
W++ CCCLWD+
Sbjct: 84 WTALCCCCLWDM 95
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.472
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,779,132
Number of Sequences: 37866
Number of extensions: 593866
Number of successful extensions: 1428
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1410
Number of HSP's gapped (non-prelim): 38
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.