Guide to the Human Genome
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Search of human proteins with 113425231

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113425231 PREDICTED: hypothetical protein [Homo sapiens]
         (223 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169208604 PREDICTED: hypothetical protein [Homo sapiens]           474   e-134
gi|113425231 PREDICTED: hypothetical protein [Homo sapiens]           474   e-134
gi|239754378 PREDICTED: similar to hCG2030094 [Homo sapiens]           39   0.004
gi|239748985 PREDICTED: similar to hCG2030094 [Homo sapiens]           39   0.004
gi|239743005 PREDICTED: hypothetical protein XP_002342716 [Homo ...    39   0.004
gi|5453936 POU class 3 homeobox 3 [Homo sapiens]                       39   0.004
gi|148762982 hypothetical protein LOC387640 [Homo sapiens]             39   0.004
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap...    39   0.005
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s...    39   0.005
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]     38   0.006
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]     38   0.006
gi|157785645 SPEG complex locus [Homo sapiens]                         38   0.008
gi|149588930 gastrulation brain homeo box 1 [Homo sapiens]             38   0.008
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ...    37   0.014
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ...    37   0.014
gi|126090909 engrailed homeobox 1 [Homo sapiens]                       36   0.023
gi|239757043 PREDICTED: functional smad suppressing element 18 [...    36   0.030
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]            36   0.030
gi|239751555 PREDICTED: functional smad suppressing element 18 [...    36   0.030
gi|239746067 PREDICTED: functional smad suppressing element 18 [...    36   0.030
gi|89257348 homeo box HB9 [Homo sapiens]                               35   0.039
gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens]    35   0.039
gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo sapi...    35   0.039
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ...    35   0.051
gi|6912372 forkhead box D3 [Homo sapiens]                              35   0.051
gi|157364934 fibrosin [Homo sapiens]                                   35   0.051
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]    34   0.088
gi|12751477 forkhead box L2 [Homo sapiens]                             33   0.15 
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]          33   0.15 
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap...    33   0.15 

>gi|169208604 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 223

 Score =  474 bits (1221), Expect = e-134
 Identities = 223/223 (100%), Positives = 223/223 (100%)

Query: 1   MGTSDMWVTHRERRRTKLRDPPSSVKTPKAWGKTRRQPSGKSGRTRTISEMESDGVWHEP 60
           MGTSDMWVTHRERRRTKLRDPPSSVKTPKAWGKTRRQPSGKSGRTRTISEMESDGVWHEP
Sbjct: 1   MGTSDMWVTHRERRRTKLRDPPSSVKTPKAWGKTRRQPSGKSGRTRTISEMESDGVWHEP 60

Query: 61  RACSELKVPGTPPLLSRLGHSARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEGS 120
           RACSELKVPGTPPLLSRLGHSARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEGS
Sbjct: 61  RACSELKVPGTPPLLSRLGHSARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEGS 120

Query: 121 GPAQDRDRRGLTLGRRDRHCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAAAA 180
           GPAQDRDRRGLTLGRRDRHCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAAAA
Sbjct: 121 GPAQDRDRRGLTLGRRDRHCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAAAA 180

Query: 181 AVTAAAGSPKPLLLCQHLLPLLPPPPPRPHRSHRRCGDYCRAR 223
           AVTAAAGSPKPLLLCQHLLPLLPPPPPRPHRSHRRCGDYCRAR
Sbjct: 181 AVTAAAGSPKPLLLCQHLLPLLPPPPPRPHRSHRRCGDYCRAR 223


>gi|113425231 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 223

 Score =  474 bits (1221), Expect = e-134
 Identities = 223/223 (100%), Positives = 223/223 (100%)

Query: 1   MGTSDMWVTHRERRRTKLRDPPSSVKTPKAWGKTRRQPSGKSGRTRTISEMESDGVWHEP 60
           MGTSDMWVTHRERRRTKLRDPPSSVKTPKAWGKTRRQPSGKSGRTRTISEMESDGVWHEP
Sbjct: 1   MGTSDMWVTHRERRRTKLRDPPSSVKTPKAWGKTRRQPSGKSGRTRTISEMESDGVWHEP 60

Query: 61  RACSELKVPGTPPLLSRLGHSARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEGS 120
           RACSELKVPGTPPLLSRLGHSARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEGS
Sbjct: 61  RACSELKVPGTPPLLSRLGHSARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEGS 120

Query: 121 GPAQDRDRRGLTLGRRDRHCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAAAA 180
           GPAQDRDRRGLTLGRRDRHCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAAAA
Sbjct: 121 GPAQDRDRRGLTLGRRDRHCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAAAA 180

Query: 181 AVTAAAGSPKPLLLCQHLLPLLPPPPPRPHRSHRRCGDYCRAR 223
           AVTAAAGSPKPLLLCQHLLPLLPPPPPRPHRSHRRCGDYCRAR
Sbjct: 181 AVTAAAGSPKPLLLCQHLLPLLPPPPPRPHRSHRRCGDYCRAR 223


>gi|239754378 PREDICTED: similar to hCG2030094 [Homo sapiens]
          Length = 282

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 35/90 (38%), Positives = 41/90 (45%), Gaps = 10/90 (11%)

Query: 114 GFLEEGSGPAQDRDRRGLTLGRRDRHCLP-IPHRRLRRDPSAASRAGRLGSPLGYRPRLL 172
           G L  G G A+        LG   RH LP  PH R R   +   R G LG+  G R   +
Sbjct: 161 GQLHHGHGAAR--------LGAAGRHALPPAPHGRRRPQEAGTRRQGVLGADDGVRHCAV 212

Query: 173 AAAAAAAAAVTAAAGSPKPLLLCQHLLPLL 202
           AAAA A A +  AA   + L L   L PLL
Sbjct: 213 AAAARARAVLLGAAARAQ-LQLQLLLRPLL 241


>gi|239748985 PREDICTED: similar to hCG2030094 [Homo sapiens]
          Length = 254

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 35/90 (38%), Positives = 41/90 (45%), Gaps = 10/90 (11%)

Query: 114 GFLEEGSGPAQDRDRRGLTLGRRDRHCLP-IPHRRLRRDPSAASRAGRLGSPLGYRPRLL 172
           G L  G G A+        LG   RH LP  PH R R   +   R G LG+  G R   +
Sbjct: 133 GQLHHGHGAAR--------LGAAGRHALPPAPHGRRRPQEAGTRRQGVLGADDGVRHCAV 184

Query: 173 AAAAAAAAAVTAAAGSPKPLLLCQHLLPLL 202
           AAAA A A +  AA   + L L   L PLL
Sbjct: 185 AAAARARAVLLGAAARAQ-LQLQLLLRPLL 213


>gi|239743005 PREDICTED: hypothetical protein XP_002342716 [Homo
           sapiens]
          Length = 254

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 35/90 (38%), Positives = 41/90 (45%), Gaps = 10/90 (11%)

Query: 114 GFLEEGSGPAQDRDRRGLTLGRRDRHCLP-IPHRRLRRDPSAASRAGRLGSPLGYRPRLL 172
           G L  G G A+        LG   RH LP  PH R R   +   R G LG+  G R   +
Sbjct: 133 GQLHHGHGAAR--------LGAAGRHALPPAPHGRRRPQEAGTRRQGVLGADDGVRHCAV 184

Query: 173 AAAAAAAAAVTAAAGSPKPLLLCQHLLPLL 202
           AAAA A A +  AA   + L L   L PLL
Sbjct: 185 AAAARARAVLLGAAARAQ-LQLQLLLRPLL 213


>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
          Length = 500

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 46/156 (29%), Positives = 57/156 (36%), Gaps = 23/156 (14%)

Query: 62  ACSELKVPGTPPLLS-RLGHSARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEGS 120
           A S   +PG   L +  + HS    AGGGG   G     G GG          G ++ GS
Sbjct: 4   AASNPYLPGNSLLAAGSIVHSDAAGAGGGGGGGGGGGGGGAGG--------GGGGMQPGS 55

Query: 121 GPAQDRDRRGLTLGRRDRHCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAAAA 180
                   RG      D   + +      +   AAS  G + S        L  AAAAAA
Sbjct: 56  AAVTSGAYRG------DPSSVKMVQSDFMQGAMAASNGGHMLSHAHQWVTALPHAAAAAA 109

Query: 181 AVTAAA--------GSPKPLLLCQHLLPLLPPPPPR 208
           A  AAA        GS   +       P  PPPPP+
Sbjct: 110 AAAAAAVEASSPWSGSAVGMAGSPQQPPQPPPPPPQ 145



 Score = 31.2 bits (69), Expect = 0.74
 Identities = 35/117 (29%), Positives = 45/117 (38%), Gaps = 7/117 (5%)

Query: 75  LSRLGHSARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEGSGPAQDRDRRGLTLG 134
           ++ L H+A  AA         ++PW      + G    Q   +    P Q  D +G   G
Sbjct: 98  VTALPHAAAAAAAAAAAAVEASSPWSGSAVGMAGS--PQQPPQPPPPPPQGPDVKG-GAG 154

Query: 135 RRDRHCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAAAAAVTAAAGSPKP 191
           R D H     H R              G P G+     AAAAAAAAA  AAA +  P
Sbjct: 155 RDDLHAGTALHHRGPPHLGPPPPPPHQGHPGGWG----AAAAAAAAAAAAAAAAHLP 207


>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
          Length = 908

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 43/133 (32%), Positives = 53/133 (39%), Gaps = 16/133 (12%)

Query: 81  SARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEGSGPAQDRDRRGLTLGRRDRHC 140
           +A  AA         AA +       P P    G    GS   + + +RG   G +D  C
Sbjct: 227 AAAAAAAAAAAAAAAAAAYYQVSAAGPQPKAAAGAGGPGSLSYRCKRKRG---GAKD--C 281

Query: 141 LPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAAAAAVTAAAGSPKPLLLCQHLLP 200
           L  PH   RR          L  P  Y+ +  AAAAAAAAA  AAA +    L   HL+ 
Sbjct: 282 LLAPHAGARR---------LLLLPRSYKAK--AAAAAAAAAAAAAAAAGATCLERFHLVN 330

Query: 201 LLPPPPPRPHRSH 213
              PPP   H  H
Sbjct: 331 GFCPPPHHHHHHH 343


>gi|111120318 NK6 transcription factor related, locus 1 [Homo
           sapiens]
          Length = 367

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 25/58 (43%), Positives = 27/58 (46%)

Query: 152 PSAASRAGRLGSPLGYRPRLLAAAAAAAAAVTAAAGSPKPLLLCQHLLPLLPPPPPRP 209
           PSA+       S         +AAAAAAAA  AAA SP  LL        L PPPP P
Sbjct: 116 PSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPP 173


>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
           sapiens]
          Length = 419

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 45/122 (36%), Positives = 49/122 (40%), Gaps = 10/122 (8%)

Query: 71  TPPLLSRLGHSARGAA-GGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEGSGPAQDRDRR 129
           +P L    G    GAA GGGG   G     G GG   PG     G    G GP       
Sbjct: 122 SPSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGG---GGGGPGGGGGGP 178

Query: 130 GLTLGRRDRHCLPIPHRRLRRDPSAASRAGRLGSPLGY-RPRLLAAAA---AAAAAVTAA 185
           G  L     H  P PH       S  + A  +  P G   P L+AAAA   AAAAA  AA
Sbjct: 179 GGGLLGGSAH--PHPHMHSLGHLSHPAAAAAMNMPSGLPHPGLVAAAAHHGAAAAAAAAA 236

Query: 186 AG 187
           AG
Sbjct: 237 AG 238


>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
          Length = 1512

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 23/202 (11%)

Query: 10  HRERRRTKLRDPPSSVKTP-KAWGKTRRQPSGKSGRTRTISEM---ESDGVWHE-PRACS 64
           HR R ++  ++PPS+ K P KA+ + + +P     R R++S +   +   V H   ++  
Sbjct: 279 HRSRTKSS-KEPPSAYKEPPKAYREDKTEPKAYR-RRRSLSPLGGRDDSPVSHRASQSLR 336

Query: 65  ELKVP-----GTPPLLSRLGHSARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEG 119
             K P     G+ P   RL  S    +      + R + +  GG V P P+ +  +    
Sbjct: 337 SRKSPSPAGGGSSPYSRRLPRSPSPYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSR 396

Query: 120 SGPAQDRDRRGLTLGR---RDRHCLPIPHRRLRR--------DPSAASRAGRLGSPLGYR 168
           S  +    R G +  R     RH       RL R         PS  +    L + L   
Sbjct: 397 SPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTLTLKSSLAAELNKN 456

Query: 169 PRLLAAAAAAAAAVTAAAGSPK 190
            +  AA AA AA    AA + K
Sbjct: 457 KKARAAEAARAAEAAKAAEATK 478


>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
          Length = 1452

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 23/202 (11%)

Query: 10  HRERRRTKLRDPPSSVKTP-KAWGKTRRQPSGKSGRTRTISEM---ESDGVWHE-PRACS 64
           HR R ++  ++PPS+ K P KA+ + + +P     R R++S +   +   V H   ++  
Sbjct: 279 HRSRTKSS-KEPPSAYKEPPKAYREDKTEPKAYR-RRRSLSPLGGRDDSPVSHRASQSLR 336

Query: 65  ELKVP-----GTPPLLSRLGHSARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEG 119
             K P     G+ P   RL  S    +      + R + +  GG V P P+ +  +    
Sbjct: 337 SRKSPSPAGGGSSPYSRRLPRSPSPYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSR 396

Query: 120 SGPAQDRDRRGLTLGR---RDRHCLPIPHRRLRR--------DPSAASRAGRLGSPLGYR 168
           S  +    R G +  R     RH       RL R         PS  +    L + L   
Sbjct: 397 SPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTLTLKSSLAAELNKN 456

Query: 169 PRLLAAAAAAAAAVTAAAGSPK 190
            +  AA AA AA    AA + K
Sbjct: 457 KKARAAEAARAAEAAKAAEATK 478


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 25/96 (26%), Positives = 35/96 (36%)

Query: 119  GSGPAQDRDRRGLTLGRRDRHCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAA 178
            G GP  +   +    G +D   +P    +     S  +RA    SP    P L  AA   
Sbjct: 2755 GQGPFSNSSEKVFVRGTQDSSAVPSAAHQEAPVTSRPARARPPDSPTSLAPPLAPAAPTP 2814

Query: 179  AAAVTAAAGSPKPLLLCQHLLPLLPPPPPRPHRSHR 214
             +   + +  P P       L  + PPP  P R HR
Sbjct: 2815 PSVTVSPSSPPTPPSQALSSLKAVGPPPQTPPRRHR 2850



 Score = 32.7 bits (73), Expect = 0.26
 Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 5/96 (5%)

Query: 126 RDRRGLTLGRRDRHCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAAAAAV--- 182
           R  RG   G R      +P +R +      +     G+P+  RP L  AA  A + V   
Sbjct: 5   RGTRGEDAGTRAPPSPGVPPKRAKVGAGGGAPVAVAGAPVFLRP-LKNAAVCAGSDVRLR 63

Query: 183 TAAAGSPKPLLLCQHLLPLLPPPPPRPHRSH-RRCG 217
              +G+P+P L       LLP P P P     RRCG
Sbjct: 64  VVVSGTPQPSLRWFRDGQLLPAPAPEPSCLWLRRCG 99


>gi|149588930 gastrulation brain homeo box 1 [Homo sapiens]
          Length = 363

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 28/58 (48%), Positives = 31/58 (53%), Gaps = 13/58 (22%)

Query: 167 YRPRLLAAAAAAAAAVTAAAGSPKP-------LLLCQHLLPLL-----PPPPPRPHRS 212
           Y P+ LAAAAAA AA TAA  +P+P        L    LLP       PPPPP PH S
Sbjct: 116 YGPQELAAAAAA-AAATAARNNPEPGGRRPEGGLEADELLPAREKVAEPPPPPPPHFS 172


>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
           sapiens]
          Length = 594

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 58/211 (27%), Positives = 76/211 (36%), Gaps = 33/211 (15%)

Query: 8   VTHRERRRTKLRDPPSSVKTPKAWGKTRRQPSGKSGRT--RTISEMESDGVWHEPRACSE 65
           VT  ER     R+  +  +  +A  + RR+  G   +   R +      G W +P   + 
Sbjct: 371 VTTHERAHLD-REGEARARLGQAAAQMRREGWGARAKLGGRGVCGKCGPGPWDDP---AR 426

Query: 66  LKVPGTPPLLSRLGHSA-RGAAGGGGRDWGRAAPWGVG-GCVLPGPWRTQGFLEEGSGPA 123
            + PG        G  A R  A  G +   R   WG G G V  G  R  G  E   G A
Sbjct: 427 RRNPGAAARAKLAGQRAGRARARTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEA 486

Query: 124 QDRDRRGLTLGRRDRHCLPI-----PHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAA 178
                      R  R  LP      P R  RR+P AA++   LG  +G  P         
Sbjct: 487 --------AAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGP--------- 529

Query: 179 AAAVTAAAGSPKPLLLCQHLLPLLPPPPPRP 209
             A  +A   P+P      L P  PP PP P
Sbjct: 530 -GAPPSALPGPRP--RPDSLSPGEPPGPPTP 557


>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
           sapiens]
          Length = 594

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 58/211 (27%), Positives = 76/211 (36%), Gaps = 33/211 (15%)

Query: 8   VTHRERRRTKLRDPPSSVKTPKAWGKTRRQPSGKSGRT--RTISEMESDGVWHEPRACSE 65
           VT  ER     R+  +  +  +A  + RR+  G   +   R +      G W +P   + 
Sbjct: 371 VTTHERAHLD-REGEARARLGQAAAQMRREGWGARAKLGGRGVCGKCGPGPWDDP---AR 426

Query: 66  LKVPGTPPLLSRLGHSA-RGAAGGGGRDWGRAAPWGVG-GCVLPGPWRTQGFLEEGSGPA 123
            + PG        G  A R  A  G +   R   WG G G V  G  R  G  E   G A
Sbjct: 427 RRNPGAAARAKLAGQRAGRARARTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEA 486

Query: 124 QDRDRRGLTLGRRDRHCLPI-----PHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAA 178
                      R  R  LP      P R  RR+P AA++   LG  +G  P         
Sbjct: 487 --------AAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGP--------- 529

Query: 179 AAAVTAAAGSPKPLLLCQHLLPLLPPPPPRP 209
             A  +A   P+P      L P  PP PP P
Sbjct: 530 -GAPPSALPGPRP--RPDSLSPGEPPGPPTP 557


>gi|126090909 engrailed homeobox 1 [Homo sapiens]
          Length = 392

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 49/175 (28%), Positives = 65/175 (37%), Gaps = 40/175 (22%)

Query: 21  PPSSVKTPKAWGKTRRQPSGKSGRTRTISEMESDGVWHEPRACSELKVPGTPPLLSRLGH 80
           PP  +  P      + QP+ +  RT   +    D +      C + + P  P LL  +  
Sbjct: 82  PPQHLAAPAH----QPQPAAQLHRT---TNFFIDNILRPDFGCKKEQPP--PQLL--VAA 130

Query: 81  SARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEGSGPAQDRDRRG----LTLGRR 136
           +ARG AGGGGR                   R +G    G  P      R       L   
Sbjct: 131 AARGGAGGGGR-----------------VERDRGQTAAGRDPVHPLGTRAPGAASLLCAP 173

Query: 137 DRHCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAAAAAVTAAAGSPKP 191
           D +C P    +     + AS+AG         P   AAAAAAA A  AAA + KP
Sbjct: 174 DANCGPPDGSQPAAAGAGASKAGN--------PAAAAAAAAAAVAAAAAAAAAKP 220


>gi|239757043 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 996

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 24/53 (45%), Positives = 25/53 (47%), Gaps = 15/53 (28%)

Query: 173 AAAAAAAAAVTAAAGSPKPLLLCQHLLPLLPPPPP----------RPHRSHRR 215
           AAA AAAAAV    G     LL  HLL   PPPPP           PH  H+R
Sbjct: 261 AAAVAAAAAVAGGGG-----LLGPHLLGAPPPPPPPPPPLAELAGAPHAHHKR 308


>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 480

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 64/234 (27%), Positives = 77/234 (32%), Gaps = 57/234 (24%)

Query: 21  PPSSVKTPKAWGKTRRQPSGKSGRTRTISEMESDGVWHEPRACSELKVPGTPP---LLSR 77
           P S    P+       QP   +   R      ++G   EPR  S    P   P    LSR
Sbjct: 194 PKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSR 253

Query: 78  LGHS------------------ARGAAGGGGRD---WGRAAP--------WGVGGCVLPG 108
              S                   R   GGGGR+    GRAAP        WG+ GC   G
Sbjct: 254 ASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVG 313

Query: 109 PWRTQGFLEEGSGPAQDRDRRGLTLGRRDRHCLPIPHRRLRRDPSAASRAGR-----LGS 163
             R      + +G +Q     G   G R R C     RR RR        G        S
Sbjct: 314 LRRGDC---DRAGSSQPPATSG--NGERCRFC-----RRRRRRGGGGEGEGTHATHGPAS 363

Query: 164 PLGYRPRLLAAAAAAAAAVTAAAGSPKPLLLCQHLLPLLPPPPPRPHRSHRRCG 217
           P G R      AA   A   +  GS + L         L PPP R H + +R G
Sbjct: 364 PPGRRHDEEVGAAVLRAG--SGEGSRRGL--------QLTPPPRRVHGALQRFG 407


>gi|239751555 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 1252

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 24/53 (45%), Positives = 25/53 (47%), Gaps = 15/53 (28%)

Query: 173 AAAAAAAAAVTAAAGSPKPLLLCQHLLPLLPPPPP----------RPHRSHRR 215
           AAA AAAAAV    G     LL  HLL   PPPPP           PH  H+R
Sbjct: 261 AAAVAAAAAVAGGGG-----LLGPHLLGAPPPPPPPPPPLAELAGAPHAHHKR 308


>gi|239746067 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 1252

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 24/53 (45%), Positives = 25/53 (47%), Gaps = 15/53 (28%)

Query: 173 AAAAAAAAAVTAAAGSPKPLLLCQHLLPLLPPPPP----------RPHRSHRR 215
           AAA AAAAAV    G     LL  HLL   PPPPP           PH  H+R
Sbjct: 261 AAAVAAAAAVAGGGG-----LLGPHLLGAPPPPPPPPPPLAELAGAPHAHHKR 308


>gi|89257348 homeo box HB9 [Homo sapiens]
          Length = 401

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 42/133 (31%), Positives = 47/133 (35%), Gaps = 19/133 (14%)

Query: 60  PRACSELKVPGTPPLLSRLGHSARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEG 119
           PRA S    P    L++ L  +A G  GGGG   G  A  G  G   P            
Sbjct: 18  PRAASAQSAPLA--LVTSLAAAASGTGGGGG---GGGASGGTSGSCSPA---------SS 63

Query: 120 SGPAQDRDRRGLTLGRRDR----HCLPIPHRR-LRRDPSAASRAGRLGSPLGYRPRLLAA 174
             PA   DR         R    HC  +P    L          G  G P  +     AA
Sbjct: 64  EPPAAPADRLRAESPSPPRLLAAHCALLPKPGFLGAGGGGGGTGGGHGGPHHHAHPGAAA 123

Query: 175 AAAAAAAVTAAAG 187
           AAAAAAA  AA G
Sbjct: 124 AAAAAAAAAAAGG 136


>gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens]
          Length = 1484

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 37/121 (30%), Positives = 47/121 (38%), Gaps = 27/121 (22%)

Query: 107 PGPWRTQGFLEEGSGPAQDRDRRGLTLGRRDRHCLPIPHRRLRRDPSAASRAG------- 159
           P   R+Q F    SG  +   RRG T   RDR  +P P +   R  S   RAG       
Sbjct: 344 PRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRS-SGPQRAGSLKREKT 402

Query: 160 --RLGSP-------------LGYRPRLLAAAAAAAAAVTAAAGSPKPLLLCQHLLPLLPP 204
             RLGSP             +G R RL     A     ++ A  P P    + + P+LP 
Sbjct: 403 EERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSP----EKVPPVLPA 458

Query: 205 P 205
           P
Sbjct: 459 P 459


>gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo
           sapiens]
          Length = 1554

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 37/121 (30%), Positives = 47/121 (38%), Gaps = 27/121 (22%)

Query: 107 PGPWRTQGFLEEGSGPAQDRDRRGLTLGRRDRHCLPIPHRRLRRDPSAASRAG------- 159
           P   R+Q F    SG  +   RRG T   RDR  +P P +   R  S   RAG       
Sbjct: 414 PRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRS-SGPQRAGSLKREKT 472

Query: 160 --RLGSP-------------LGYRPRLLAAAAAAAAAVTAAAGSPKPLLLCQHLLPLLPP 204
             RLGSP             +G R RL     A     ++ A  P P    + + P+LP 
Sbjct: 473 EERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSP----EKVPPVLPA 528

Query: 205 P 205
           P
Sbjct: 529 P 529


>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
           sapiens]
          Length = 636

 Score = 35.0 bits (79), Expect = 0.051
 Identities = 32/79 (40%), Positives = 34/79 (43%), Gaps = 9/79 (11%)

Query: 144 PHRRLRRDPSAASRAGRLGSPLGYRPR--LLAAAAAAAAAVTAAAGSPKPLLLCQHLLP- 200
           P  RL   P    R  R    L +R R  LL AAAAAAAA  AAA +     L Q   P 
Sbjct: 302 PSPRLFPRPGFLPRRRR--GVLAHRRRGVLLPAAAAAAAAAAAAAAAAAAFCLTQLFAPP 359

Query: 201 ----LLPPPPPRPHRSHRR 215
                 PPP P P    RR
Sbjct: 360 TAAAFCPPPAPVPRLFARR 378


>gi|6912372 forkhead box D3 [Homo sapiens]
          Length = 478

 Score = 35.0 bits (79), Expect = 0.051
 Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 4/58 (6%)

Query: 153 SAASRAGRLGSPLGYRPRLLAAA---AAAAAAVTAAAGSPKPLLLCQHLLPLLPPPPP 207
           +AA  AG  G P G  P   A A    AAAAA  AAA    P  L   + P+LPP  P
Sbjct: 263 AAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYAL-PPVAPVLPPAVP 319


>gi|157364934 fibrosin [Homo sapiens]
          Length = 460

 Score = 35.0 bits (79), Expect = 0.051
 Identities = 39/110 (35%), Positives = 48/110 (43%), Gaps = 24/110 (21%)

Query: 117 EEGSGPAQDRDRR------GLTLGRRDRHCLPIPHRRLRRDPSAA-SRAGRLGS-PLGYR 168
           E    P  D++R        +T   +DR  LP    +LR  P+   +RAG  G  P    
Sbjct: 242 EAARTPGSDKERPVERREPSITKEEKDRD-LPFSRPQLRVSPATPKARAGEEGPRPTKES 300

Query: 169 PRL-----------LAAAAAAAAAVTAAAGSPKPLLLCQHLLPLLPPPPP 207
            R+            AAAAAAAAA  AAA  P+ L    HLL   P PPP
Sbjct: 301 VRVKEERKEEAAAAAAAAAAAAAAAAAAATGPQGL----HLLFERPRPPP 346


>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
          Length = 663

 Score = 34.3 bits (77), Expect = 0.088
 Identities = 30/82 (36%), Positives = 35/82 (42%), Gaps = 23/82 (28%)

Query: 149 RRDPSAASRAGRLGSPLGYRPRLLAAAAAA-------------AAAVTAAAGSPKPLLLC 195
           R +P  A R+G       +   + AAAAAA             AAA  AAA  P P L  
Sbjct: 299 RAEPPFAPRSGD-----AHYGAVAAAAAAALHGYGAVNLNLNLAAAAAAAAAGPGPHLQ- 352

Query: 196 QHLLPLLPPPPP----RPHRSH 213
            H  P  PPPPP     PH+ H
Sbjct: 353 HHAPPPAPPPPPAPAQHPHQHH 374


>gi|12751477 forkhead box L2 [Homo sapiens]
          Length = 376

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 33/81 (40%)

Query: 163 SPLGYRPRLLAAAAAAAAAVTAAA--GSPKPLLLCQHLL--------------------- 199
           SP+ Y    +AAAAAAAAA  AAA  GSP    + + L                      
Sbjct: 211 SPMPYASCQMAAAAAAAAAAAAAAGPGSPGAAAVVKGLAGPAASYGPYTRVQSMALPPGV 270

Query: 200 ----------PLLPPPPPRPH 210
                     P  PPPPP PH
Sbjct: 271 VNSYNGLGGPPAAPPPPPHPH 291


>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
          Length = 1192

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 46/177 (25%), Positives = 59/177 (33%), Gaps = 41/177 (23%)

Query: 14  RRTKLRDPPSSVKTPKAWGKTRRQPSGKSGRTRTISEMESDGVWHEPRACSELKVPGTPP 73
           RR K+  PP + K  K    +  +  G  G    +S  ES+G   +PR        GT  
Sbjct: 176 RRLKVAPPPPAPKPCKTVTTSGAKAGGGKGAGSRLSWPESEG---KPRVKGSKSSAGTGA 232

Query: 74  LLSRLGHSARGAAGGGGRDWGRAAPWGVGGCVLPGPWRTQGFLEEGSGPAQDRDRRGLTL 133
            +S    +A  AAGGGG     +   G G                  G    R  +  TL
Sbjct: 233 SVSAAATAA--AAGGGGSTASTSGGVGAGA--------------GARGKLSPRKGKSKTL 276

Query: 134 GRRDRHCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRL-LAAAAAAAAAVTAAAGSP 189
              D H                      G P G  P L L    + A AVTAA+  P
Sbjct: 277 DNSDLH---------------------PGPPAGSPPPLTLPPTPSPATAVTAASAQP 312


>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
           sapiens]
          Length = 288

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 23/59 (38%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 151 DPSAASRAGRLGSPLGYRPRLLAAAAAAAAAVTAAAGSPKPLLLCQHLLPLLPPPPPRP 209
           DPSAAS      SPL   P   + AA A AAV   A  P    LC    P   P    P
Sbjct: 170 DPSAASLCA--ASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASP 226



 Score = 32.0 bits (71), Expect = 0.44
 Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 8/61 (13%)

Query: 152 PSAASRAGRLGSPLGYRPRLLAAAAAA--AAAVTAAAGSP-KPLLLCQHLLPLLPPPPPR 208
           P+AAS A    +PL   P   A AAAA  AA V + A SP  PL + Q   P+  PP P 
Sbjct: 221 PAAASPAA--AAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQ---PVSFPPAPV 275

Query: 209 P 209
           P
Sbjct: 276 P 276



 Score = 29.3 bits (64), Expect = 2.8
 Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 152 PSAASRAGR---LGSPLGYRPRLLAAAAAAAAAVTAAAGSPKPLLLCQHLLPLLPP 204
           PSA +RA       +P   RP      AAA AAV  AA  P    LC    P   P
Sbjct: 87  PSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVP 142



 Score = 28.1 bits (61), Expect = 6.3
 Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 7/52 (13%)

Query: 151 DPSAAS-------RAGRLGSPLGYRPRLLAAAAAAAAAVTAAAGSPKPLLLC 195
           DPSAAS        A     P   RP      AAA AAV  AA  P    LC
Sbjct: 126 DPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLC 177


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.456 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,397,052
Number of Sequences: 37866
Number of extensions: 737642
Number of successful extensions: 7317
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 6432
Number of HSP's gapped (non-prelim): 900
length of query: 223
length of database: 18,247,518
effective HSP length: 98
effective length of query: 125
effective length of database: 14,536,650
effective search space: 1817081250
effective search space used: 1817081250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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