Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 20149675
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20149675 EF-hand domain family, member D2 [Homo sapiens]
(240 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20149675 EF-hand domain family, member D2 [Homo sapiens] 465 e-131
gi|20149496 EF-hand domain family, member D1 [Homo sapiens] 294 5e-80
gi|13899241 ionized calcium binding adapter molecule 2 isoform 1... 59 5e-09
gi|14574568 allograft inflammatory factor 1 isoform 3 [Homo sapi... 53 2e-07
gi|14574566 allograft inflammatory factor 1 isoform 1 [Homo sapi... 51 1e-06
gi|4757902 caltractin [Homo sapiens] 50 2e-06
gi|223278387 calmodulin-like 5 [Homo sapiens] 49 3e-06
gi|4507615 troponin C, slow [Homo sapiens] 49 5e-06
gi|58218968 calmodulin 3 [Homo sapiens] 47 1e-05
gi|4502549 calmodulin 2 [Homo sapiens] 47 1e-05
gi|5901912 calmodulin 1 [Homo sapiens] 47 1e-05
gi|4757974 centrin 1 [Homo sapiens] 47 1e-05
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 46 3e-05
gi|4885111 calmodulin-like 3 [Homo sapiens] 45 6e-05
gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo sapiens] 45 7e-05
gi|209862851 plastin 3 [Homo sapiens] 45 7e-05
gi|7549809 plastin 3 [Homo sapiens] 45 7e-05
gi|29568111 myosin regulatory light chain 9 isoform a [Homo sapi... 43 2e-04
gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo... 42 4e-04
gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo... 42 4e-04
gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo... 42 4e-04
gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo ... 42 4e-04
gi|50897266 calmodulin-like 6 [Homo sapiens] 42 5e-04
gi|21624641 calcium binding protein 4 [Homo sapiens] 42 6e-04
gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric [... 42 6e-04
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] 41 8e-04
gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens] 41 8e-04
gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens] 41 8e-04
gi|11067753 calcium binding protein 5 [Homo sapiens] 40 0.001
gi|94981553 slow cardiac myosin regulatory light chain 2 [Homo s... 39 0.003
>gi|20149675 EF-hand domain family, member D2 [Homo sapiens]
Length = 240
Score = 465 bits (1197), Expect = e-131
Identities = 240/240 (100%), Positives = 240/240 (100%)
Query: 1 MATDELATKLSRRLQMEGEGGGETPEQPGLNGAAAAAAGAPDEAAEALGSADCELSAKLL 60
MATDELATKLSRRLQMEGEGGGETPEQPGLNGAAAAAAGAPDEAAEALGSADCELSAKLL
Sbjct: 1 MATDELATKLSRRLQMEGEGGGETPEQPGLNGAAAAAAGAPDEAAEALGSADCELSAKLL 60
Query: 61 RRADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLM 120
RRADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLM
Sbjct: 61 RRADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLM 120
Query: 121 MEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFLLIFRKAAAGELQEDSGLCVLARLSEI 180
MEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFLLIFRKAAAGELQEDSGLCVLARLSEI
Sbjct: 121 MEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFLLIFRKAAAGELQEDSGLCVLARLSEI 180
Query: 181 DVSSEGVKGAKSFFEAKVQAINVSSRFEEEIKAEQEERKKQAEEMKQRKAAFKELQSTFK 240
DVSSEGVKGAKSFFEAKVQAINVSSRFEEEIKAEQEERKKQAEEMKQRKAAFKELQSTFK
Sbjct: 181 DVSSEGVKGAKSFFEAKVQAINVSSRFEEEIKAEQEERKKQAEEMKQRKAAFKELQSTFK 240
>gi|20149496 EF-hand domain family, member D1 [Homo sapiens]
Length = 239
Score = 294 bits (752), Expect = 5e-80
Identities = 159/240 (66%), Positives = 188/240 (78%), Gaps = 4/240 (1%)
Query: 1 MATDELATKLSRRLQMEGEGGGETPEQPGLNGAAAAAAGAPDEAAEA-LGSADCELSAKL 59
MA++ELA KL RRL+ E E P+ L A P+ A A SAD ELSA+L
Sbjct: 1 MASEELACKLERRLRRE-EAEESGPQLAPLGAPAPEPKPEPEPPARAPTASADAELSAQL 59
Query: 60 LRRADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKL 119
RR D+N+G P+ RVFNPYTEF EFSR+ IKD+E MFK YDAGRDGFIDLMELKL
Sbjct: 60 SRRLDINEGAARPRRC--RVFNPYTEFPEFSRRLIKDLESMFKLYDAGRDGFIDLMELKL 117
Query: 120 MMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFLLIFRKAAAGELQEDSGLCVLARLSE 179
MMEKLGAPQTHLGLK+MIKEVDEDFD KLSFREFLLIF KAAAGELQEDSGL LA+LSE
Sbjct: 118 MMEKLGAPQTHLGLKSMIKEVDEDFDGKLSFREFLLIFHKAAAGELQEDSGLMALAKLSE 177
Query: 180 IDVSSEGVKGAKSFFEAKVQAINVSSRFEEEIKAEQEERKKQAEEMKQRKAAFKELQSTF 239
IDV+ EGVKGAK+FFEAKVQA++ +S+FE E+KAEQ+ERK++ EE + R+AAF++L++ F
Sbjct: 178 IDVALEGVKGAKNFFEAKVQALSSASKFEAELKAEQDERKREEEERRLRQAAFQKLKANF 237
>gi|13899241 ionized calcium binding adapter molecule 2 isoform 1
[Homo sapiens]
Length = 150
Score = 58.5 bits (140), Expect = 5e-09
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 92 KQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFR 151
+++ ++ + ++D +G IDLM LK MMEKLG P+THL +K MI EV +S+R
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 152 EFL 154
+F+
Sbjct: 107 DFV 109
>gi|14574568 allograft inflammatory factor 1 isoform 3 [Homo
sapiens]
Length = 147
Score = 53.1 bits (126), Expect = 2e-07
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 93 QIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFRE 152
+++ ++ + ++D +G ID+M LK M+EKLG P+THL LK +I EV S+ +
Sbjct: 46 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 105
Query: 153 FL 154
FL
Sbjct: 106 FL 107
>gi|14574566 allograft inflammatory factor 1 isoform 1 [Homo
sapiens]
Length = 93
Score = 50.8 bits (120), Expect = 1e-06
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 103 QYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFL 154
++D +G ID+M LK M+EKLG P+THL LK +I EV S+ +FL
Sbjct: 2 EFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFL 53
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 74 SPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGL 133
S R+ +P E E +++I++ F +DA G ID+ ELK+ M LG +
Sbjct: 13 SSQRKRMSPKPELTEEQKQEIREA---FDLFDADGTGTIDVKELKVAMRALGFEPKKEEI 69
Query: 134 KNMIKEVDEDFDSKLSFREFLLIFRKAAAGELQEDSGLCVLARLSEIDVSSEGVKGAKSF 193
K MI E+D++ K++F +FL + + ++SE D E +K K F
Sbjct: 70 KKMISEIDKEGTGKMNFGDFLTVMTQ----------------KMSEKDTKEEILKAFKLF 113
Score = 43.9 bits (102), Expect = 1e-04
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 87 KEFSRKQIKD-MEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFD 145
++ S K K+ + K FK +D G I LK + ++LG T L+ MI E D D D
Sbjct: 95 QKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGD 154
Query: 146 SKLSFREFLLIFRKAA 161
++S +EFL I +K +
Sbjct: 155 GEVSEQEFLRIMKKTS 170
>gi|223278387 calmodulin-like 5 [Homo sapiens]
Length = 146
Score = 49.3 bits (116), Expect = 3e-06
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 6/138 (4%)
Query: 21 GGETPEQPGLNGAAAAAAGAPDEA---AEALGSADCELSAKLLRRADLNQGIGEPQSPS- 76
G TPE+ A +A A+ LG+A + + K L A L + I E S
Sbjct: 3 GELTPEEEAQYKKAFSAVDTDGNGTINAQELGAA-LKATGKNLSEAQLRKLISEVDSDGD 61
Query: 77 -RRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKN 135
F + + +R ++D++ F+ +D DG I + EL+ M LG P L
Sbjct: 62 GEISFQEFLTAAKKARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDA 121
Query: 136 MIKEVDEDFDSKLSFREF 153
MI+E D D D ++++ EF
Sbjct: 122 MIREADVDQDGRVNYEEF 139
Score = 46.6 bits (109), Expect = 2e-05
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 88 EFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSK 147
E + ++ +K F D +G I+ EL ++ G + L+ +I EVD D D +
Sbjct: 4 ELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDGDGE 63
Query: 148 LSFREFLLIFRKAAAG 163
+SF+EFL +KA AG
Sbjct: 64 ISFQEFLTAAKKARAG 79
>gi|4507615 troponin C, slow [Homo sapiens]
Length = 161
Score = 48.5 bits (114), Expect = 5e-06
Identities = 20/63 (31%), Positives = 40/63 (63%)
Query: 92 KQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFR 151
K +++ +F+ +D DG+IDL ELK+M++ G T ++ ++K+ D++ D ++ +
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 152 EFL 154
EFL
Sbjct: 152 EFL 154
Score = 37.7 bits (86), Expect = 0.009
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 87 KEFSRKQIKDMEKMFKQYDAG-RDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFD 145
++ + +Q + + F + G DG I EL +M LG T L+ MI EVDED
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 146 SKLSFREFLLI 156
+ F EFL++
Sbjct: 70 GTVDFDEFLVM 80
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 47.0 bits (110), Expect = 1e-05
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 88 EFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSK 147
+ + +QI + ++ F +D DG I EL +M LG T L++MI EVD D +
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 148 LSFREFL-LIFRKAAAGELQED 168
+ F EFL ++ RK + +E+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEE 85
Score = 41.2 bits (95), Expect = 8e-04
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 63 ADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDME------KMFKQYDAGRDGFIDLME 116
A+L I E + + + EF +++KD + + F+ +D +G+I E
Sbjct: 47 AELQDMINEVDADGNGTID-FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 105
Query: 117 LKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFL 154
L+ +M LG T + MI+E D D D ++++ EF+
Sbjct: 106 LRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 47.0 bits (110), Expect = 1e-05
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 88 EFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSK 147
+ + +QI + ++ F +D DG I EL +M LG T L++MI EVD D +
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 148 LSFREFL-LIFRKAAAGELQED 168
+ F EFL ++ RK + +E+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEE 85
Score = 41.2 bits (95), Expect = 8e-04
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 63 ADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDME------KMFKQYDAGRDGFIDLME 116
A+L I E + + + EF +++KD + + F+ +D +G+I E
Sbjct: 47 AELQDMINEVDADGNGTID-FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 105
Query: 117 LKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFL 154
L+ +M LG T + MI+E D D D ++++ EF+
Sbjct: 106 LRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 47.0 bits (110), Expect = 1e-05
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 88 EFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSK 147
+ + +QI + ++ F +D DG I EL +M LG T L++MI EVD D +
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 148 LSFREFL-LIFRKAAAGELQED 168
+ F EFL ++ RK + +E+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEE 85
Score = 41.2 bits (95), Expect = 8e-04
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 63 ADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDME------KMFKQYDAGRDGFIDLME 116
A+L I E + + + EF +++KD + + F+ +D +G+I E
Sbjct: 47 AELQDMINEVDADGNGTID-FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 105
Query: 117 LKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFL 154
L+ +M LG T + MI+E D D D ++++ EF+
Sbjct: 106 LRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 47.0 bits (110), Expect = 1e-05
Identities = 27/89 (30%), Positives = 41/89 (46%)
Query: 68 GIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAP 127
G +P + S E + Q +++ + F +D G ID ELK+ M LG
Sbjct: 4 GFKKPSAASTGQKRKVAPKPELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFE 63
Query: 128 QTHLGLKNMIKEVDEDFDSKLSFREFLLI 156
+K MI EVD + K+SF +FL +
Sbjct: 64 PRKEEMKKMISEVDREGTGKISFNDFLAV 92
Score = 40.8 bits (94), Expect = 0.001
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 87 KEFSRKQIKD-MEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFD 145
++ S K K+ + K F+ +D G I LK + +LG T L+ MI E D D D
Sbjct: 95 QKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGD 154
Query: 146 SKLSFREFLLIFRKAA 161
+++ EFL I +K +
Sbjct: 155 GEVNEEEFLRIMKKTS 170
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 46.2 bits (108), Expect = 3e-05
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 90 SRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLS 149
S + I + + F +DA G I + EL +M LG T L +I+EVDED +
Sbjct: 13 SEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTID 72
Query: 150 FREFLLI----FRKAAAGELQEDSGLC 172
F EFL++ ++ A G+ +E+ C
Sbjct: 73 FEEFLVMMVRQMKEDAKGKSEEELAEC 99
Score = 37.7 bits (86), Expect = 0.009
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 92 KQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFR 151
K +++ + F+ +D DG+ID EL + G T +++++K+ D++ D ++ F
Sbjct: 91 KSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFD 150
Query: 152 EFL 154
EFL
Sbjct: 151 EFL 153
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 45.1 bits (105), Expect = 6e-05
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 88 EFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSK 147
+ + +Q+ + ++ F +D DG I EL +M LG T L++M+ E+D D +
Sbjct: 4 QLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGT 63
Query: 148 LSFREFL-LIFRKAAAGELQED 168
+ F EFL ++ RK + +E+
Sbjct: 64 VDFPEFLGMMARKMKDTDNEEE 85
Score = 39.3 bits (90), Expect = 0.003
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 83 YTEFKEFSRKQIKDME------KMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNM 136
+ EF +++KD + + F+ +D +GF+ EL+ +M +LG + + M
Sbjct: 66 FPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEM 125
Query: 137 IKEVDEDFDSKLSFREFLLI 156
I+ D D D ++++ EF+ +
Sbjct: 126 IRAADTDGDGQVNYEEFVRV 145
>gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo sapiens]
Length = 132
Score = 44.7 bits (104), Expect = 7e-05
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 113 DLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFL 154
D+M LK M+EKLG P+THL LK +I EV S+ +FL
Sbjct: 78 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFL 119
>gi|209862851 plastin 3 [Homo sapiens]
Length = 630
Score = 44.7 bits (104), Expect = 7e-05
Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 14/117 (11%)
Query: 88 EFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEV----DED 143
+ S+ ++ ++++ F + D +GFI EL + ++ P ++ +I+++ D +
Sbjct: 8 QISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMLDGDRN 67
Query: 144 FDSKLSFREFLLIFRKAAAGE--------LQEDSGLCVLARLSEIDVSSEGVKGAKS 192
D K+SF EF+ IF++ + + + G+C L SE+ SSEG + + S
Sbjct: 68 KDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSEL--SSEGTQHSYS 122
>gi|7549809 plastin 3 [Homo sapiens]
Length = 630
Score = 44.7 bits (104), Expect = 7e-05
Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 14/117 (11%)
Query: 88 EFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEV----DED 143
+ S+ ++ ++++ F + D +GFI EL + ++ P ++ +I+++ D +
Sbjct: 8 QISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMLDGDRN 67
Query: 144 FDSKLSFREFLLIFRKAAAGE--------LQEDSGLCVLARLSEIDVSSEGVKGAKS 192
D K+SF EF+ IF++ + + + G+C L SE+ SSEG + + S
Sbjct: 68 KDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSEL--SSEGTQHSYS 122
>gi|29568111 myosin regulatory light chain 9 isoform a [Homo
sapiens]
Length = 172
Score = 43.1 bits (100), Expect = 2e-04
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 86 FKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFD 145
F F + QI++ ++ F D RDGFID +L M+ LG T L+ M+ E
Sbjct: 23 FAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLEGMMSEA----P 78
Query: 146 SKLSFREFLLIFRKAAAGELQED 168
++F FL +F + G ED
Sbjct: 79 GPINFTMFLTMFGEKLNGTDPED 101
>gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 42.4 bits (98), Expect = 4e-04
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 86 FKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFD 145
F F + QI++ ++ F D RDGFID +L M+ LG T L M+ E
Sbjct: 23 FAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEA----P 78
Query: 146 SKLSFREFLLIFRKAAAGELQED 168
++F FL +F + G ED
Sbjct: 79 GPINFTMFLTMFGEKLNGTDPED 101
>gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo
sapiens]
Length = 154
Score = 42.4 bits (98), Expect = 4e-04
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 86 FKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFD 145
F F + QI++ ++ F D RDGFID +L M+ LG T L M+ E
Sbjct: 5 FAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEA----P 60
Query: 146 SKLSFREFLLIFRKAAAGELQED 168
++F FL +F + G ED
Sbjct: 61 GPINFTMFLTMFGEKLNGTDPED 83
>gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 42.4 bits (98), Expect = 4e-04
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 86 FKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFD 145
F F + QI++ ++ F D RDGFID +L M+ LG T L M+ E
Sbjct: 23 FAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEA----P 78
Query: 146 SKLSFREFLLIFRKAAAGELQED 168
++F FL +F + G ED
Sbjct: 79 GPINFTMFLTMFGEKLNGTDPED 101
>gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 42.4 bits (98), Expect = 4e-04
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 86 FKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFD 145
F F + QI++ ++ F D RDGFID +L M+ LG T L M+ E
Sbjct: 23 FAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEA----P 78
Query: 146 SKLSFREFLLIFRKAAAGELQED 168
++F FL +F + G ED
Sbjct: 79 GPINFTMFLTMFGEKLNGTDPED 101
>gi|50897266 calmodulin-like 6 [Homo sapiens]
Length = 181
Score = 42.0 bits (97), Expect = 5e-04
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 86 FKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFD 145
+ E ++ Q ++ F+ +D G+ID LK ++ G P + + M+KE D+D D
Sbjct: 101 YHEKAQNQESELRAAFRVFDKEGKGYIDWNTLKYVLMNAGEPLNEVEAEQMMKEADKDGD 160
Query: 146 SKLSFREFL 154
+ + EF+
Sbjct: 161 RTIDYEEFV 169
Score = 38.9 bits (89), Expect = 0.004
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 87 KEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDS 146
+ S +QIK+ + +F+ +D +G + EL+ +M LG T L +M K+VD D
Sbjct: 28 ERLSAEQIKEYKGVFEMFDEEGNGEVKTGELEWLMSLLGINPTKSELASMAKDVDRDNKG 87
Query: 147 KLSFREFLLIFRKAAAGELQEDSGLCVLARLSEIDVSSEGVKGAKSFFEAKVQAINVSSR 206
+ FL + ++S L R+ + EG KG + K +N
Sbjct: 88 FFNCDGFLALMGVYHEKAQNQESELRAAFRVFD----KEG-KGYIDWNTLKYVLMNAGEP 142
Query: 207 FEEEIKAEQEERKKQAEEMKQRKAAFKE 234
E E E+ K+A++ R ++E
Sbjct: 143 LNE---VEAEQMMKEADKDGDRTIDYEE 167
>gi|21624641 calcium binding protein 4 [Homo sapiens]
Length = 275
Score = 41.6 bits (96), Expect = 6e-04
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 5/139 (3%)
Query: 18 GEGGGET-PEQPGLNGAAAAAAGAPDEAAEALGSADCELSAKLLRRADLNQGIGEPQSPS 76
G G +T PE PG + + P A A + R L+ P
Sbjct: 56 GSSGEQTGPEAPGSSNNPPSTGEGPAGAPPASPGPASSRQSHRHRPDSLHDAAQRTYGPL 115
Query: 77 -RRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKN 135
RVF + +E +++ +++ F+++D RDG+I EL M LG T + L
Sbjct: 116 LNRVFG---KDRELGPEELDELQAAFEEFDTDRDGYISHRELGDCMRTLGYMPTEMELLE 172
Query: 136 MIKEVDEDFDSKLSFREFL 154
+ + + ++ F EF+
Sbjct: 173 VSQHIKMRMGGRVDFEEFV 191
Score = 38.5 bits (88), Expect = 0.005
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 94 IKDMEKMFKQYDAGRDGFIDLMELKLMMEKL-GAPQTHLGLKNMIKEVDEDFDSKLSFRE 152
++++ F+++D RDG I + EL+ + L G P L M++EVD + D + F E
Sbjct: 208 VRELRIAFREFDRDRDGRITVAELREAVPALLGEPLAGPELDEMLREVDLNGDGTVDFDE 267
Query: 153 FLLIFRK 159
F+++ +
Sbjct: 268 FVMMLSR 274
>gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric
[Homo sapiens]
Length = 171
Score = 41.6 bits (96), Expect = 6e-04
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 86 FKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFD 145
F F + QI++ ++ F D RDGFID +L M+ LG T L M+ E
Sbjct: 22 FAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLDAMMNEA----P 77
Query: 146 SKLSFREFLLIFRKAAAGELQED 168
++F FL +F + G ED
Sbjct: 78 GPINFTMFLTMFGEKLNGTDPED 100
>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
Length = 370
Score = 41.2 bits (95), Expect = 8e-04
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 94 IKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQT-HLGLKNMIKEVDEDFDSKLSFRE 152
+K++ F+++D DG I EL+ M KL Q H ++ +I++VD + D ++ F E
Sbjct: 304 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 363
Query: 153 FL 154
F+
Sbjct: 364 FV 365
Score = 39.3 bits (90), Expect = 0.003
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 17 EGEGGGETPEQPGLNGAAAAAAGAPDEAAEALGSADCELSAKLLRRADLNQGIGEPQSPS 76
+GE G +P GL G+ A G D A AD L R L+ G+ +S
Sbjct: 169 DGEERGLSPAL-GLRGSLRAR-GRGDSVPAAASEADPFLHRL---RPMLSSAFGQDRS-- 221
Query: 77 RRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNM 136
++I+++ + F+++D +DG+I+ +L M +G T + L +
Sbjct: 222 ------------LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIEL 269
Query: 137 IKEVDEDFDSKLSFREFLLIFRKAAAGELQEDSGLCVLA-RLSEIDVSSEGVKGAKSFFE 195
++++ + + F +F+ + E + G+ L E D + +G E
Sbjct: 270 SQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELRE 329
Query: 196 A--KVQAINVSSRFEEEI 211
A K+ V R EEI
Sbjct: 330 AMRKLLGHQVGHRDIEEI 347
>gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens]
Length = 167
Score = 41.2 bits (95), Expect = 8e-04
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 94 IKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQT-HLGLKNMIKEVDEDFDSKLSFRE 152
+K++ F+++D DG I EL+ M KL Q H ++ +I++VD + D ++ F E
Sbjct: 101 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
Query: 153 FL 154
F+
Sbjct: 161 FV 162
Score = 38.9 bits (89), Expect = 0.004
Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 92 KQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFR 151
++I+++ + F+++D +DG+I+ +L M +G T + L + ++++ + + F
Sbjct: 22 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 81
Query: 152 EFLLIFRKAAAGELQEDSGLCVLA-RLSEIDVSSEGVKGAKSFFEA--KVQAINVSSRFE 208
+F+ + E + G+ L E D + +G EA K+ V R
Sbjct: 82 DFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDI 141
Query: 209 EEI 211
EEI
Sbjct: 142 EEI 144
>gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens]
Length = 227
Score = 41.2 bits (95), Expect = 8e-04
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 94 IKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQT-HLGLKNMIKEVDEDFDSKLSFRE 152
+K++ F+++D DG I EL+ M KL Q H ++ +I++VD + D ++ F E
Sbjct: 161 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 220
Query: 153 FL 154
F+
Sbjct: 221 FV 222
Score = 40.4 bits (93), Expect = 0.001
Identities = 39/180 (21%), Positives = 73/180 (40%), Gaps = 28/180 (15%)
Query: 50 SADCELSAKLLRRAD---------------LNQGIGEPQSPSRRVFNPYTEFKEFSRKQI 94
+AD EL LL A L +G E + P R + ++I
Sbjct: 35 AADAELPGPLLMLAQNCAVMHNLLGPACIFLRKGFAENRQPDRSL----------RPEEI 84
Query: 95 KDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFL 154
+++ + F+++D +DG+I+ +L M +G T + L + ++++ + + F +F+
Sbjct: 85 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 144
Query: 155 LIFRKAAAGELQEDSGLCVLA-RLSEIDVSSEGVKGAKSFFEA--KVQAINVSSRFEEEI 211
+ E + G+ L E D + +G EA K+ V R EEI
Sbjct: 145 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEI 204
>gi|11067753 calcium binding protein 5 [Homo sapiens]
Length = 173
Score = 40.4 bits (93), Expect = 0.001
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 94 IKDMEKMFKQYDAGRDGFIDLMELKLMMEKL-GAPQTHLGLKNMIKEVDEDFDSKLSFRE 152
+++M FK++D DG I L+EL+ M++L G T + +++E D + D + F E
Sbjct: 107 VQEMRDAFKEFDTNGDGEITLVELQQAMQRLLGERLTPREISEVVREADVNGDGTVDFEE 166
Query: 153 FL 154
F+
Sbjct: 167 FV 168
Score = 36.2 bits (82), Expect = 0.026
Identities = 15/68 (22%), Positives = 37/68 (54%)
Query: 87 KEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDS 146
+ + +I+++ + F ++D RDGFI +L +M +G T + L + +++ +
Sbjct: 23 RPLGQDEIEELREAFLEFDKDRDGFISCKDLGNLMRTMGYMPTEMELIELGQQIRMNLGG 82
Query: 147 KLSFREFL 154
++ F +F+
Sbjct: 83 RVDFDDFV 90
>gi|94981553 slow cardiac myosin regulatory light chain 2 [Homo
sapiens]
Length = 166
Score = 39.3 bits (90), Expect = 0.003
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 24/148 (16%)
Query: 86 FKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKN-MIKEVDEDF 144
F F + QI++ ++ F D RDGFID +L+ LG + +KN I E+ ++
Sbjct: 18 FSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALG----RVNVKNEEIDEMIKEA 73
Query: 145 DSKLSFREFLLIFRKAAAGELQEDSGLCVLARLSEIDVSSEGVKGAKSFFEAKVQAINVS 204
++F FL +F + G E++ +L D +GV +
Sbjct: 74 PGPINFTVFLTMFGEKLKGADPEET---ILNAFKVFDPEGKGV---------------LK 115
Query: 205 SRFEEEIKAEQEERKKQAEEMKQRKAAF 232
+ + E+ Q ER + EE+ Q AAF
Sbjct: 116 ADYVREMLTTQAERFSK-EEVDQMFAAF 142
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,403,610
Number of Sequences: 37866
Number of extensions: 370449
Number of successful extensions: 4126
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 3705
Number of HSP's gapped (non-prelim): 529
length of query: 240
length of database: 18,247,518
effective HSP length: 99
effective length of query: 141
effective length of database: 14,498,784
effective search space: 2044328544
effective search space used: 2044328544
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.