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Search of human proteins with 20069858
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20069858 WAP four-disulfide core domain 12 precursor [Homo
sapiens]
(111 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20069858 WAP four-disulfide core domain 12 precursor [Homo sa... 241 9e-65
gi|4507065 secretory leukocyte peptidase inhibitor precursor [Ho... 57 4e-09
gi|21717822 WAP four-disulfide core domain 5 precursor [Homo sap... 52 1e-07
gi|153946389 WAP four-disulfide core domain 8 precursor [Homo sa... 50 3e-07
gi|153946387 WAP four-disulfide core domain 8 precursor [Homo sa... 50 3e-07
gi|4505787 elafin preproprotein [Homo sapiens] 47 4e-06
gi|10732863 serine peptidase inhibitor-like, with Kunitz and WAP... 44 3e-05
gi|32307109 WAP four-disulfide core domain 3 precursor [Homo sap... 43 5e-05
gi|56699495 WAP four-disulfide core domain 2 precursor [Homo sap... 43 6e-05
gi|22779936 WAP four-disulfide core domain 6 precursor [Homo sap... 41 2e-04
gi|119395746 Kallmann syndrome 1 protein precursor [Homo sapiens] 37 0.004
gi|31563528 serine peptidase inhibitor-like, with Kunitz and WAP... 36 0.006
gi|28212222 WFIKKN2 protein [Homo sapiens] 36 0.006
gi|16751923 WAP, follistatin/kazal, immunoglobulin, kunitz and n... 33 0.049
gi|18379353 WAP four-disulfide core domain 1 precursor [Homo sap... 32 0.14
gi|145580584 uromodulin-like 1 isoform 1 precursor [Homo sapiens] 32 0.14
gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens] 32 0.14
gi|4759166 secreted phosphoprotein 1 isoform b [Homo sapiens] 31 0.19
gi|91206462 secreted phosphoprotein 1 isoform a [Homo sapiens] 31 0.19
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H... 28 1.6
gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [H... 28 1.6
gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapi... 28 1.6
gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapi... 28 1.6
gi|162417982 zinc finger protein 64 isoform d [Homo sapiens] 28 1.6
gi|194328809 latent transforming growth factor beta binding prot... 28 2.1
gi|18497288 latent transforming growth factor beta binding prote... 28 2.1
gi|19743803 fibulin 5 precursor [Homo sapiens] 27 2.7
gi|73747881 zinc finger, ZZ type with EF hand domain 1 [Homo sap... 27 2.7
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 27 3.5
gi|195947389 autotaxin isoform 3 preproprotein [Homo sapiens] 27 3.5
>gi|20069858 WAP four-disulfide core domain 12 precursor [Homo
sapiens]
Length = 111
Score = 241 bits (615), Expect = 9e-65
Identities = 111/111 (100%), Positives = 111/111 (100%)
Query: 1 MGSSSFLVLMVSLVLVTLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERK 60
MGSSSFLVLMVSLVLVTLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERK
Sbjct: 1 MGSSSFLVLMVSLVLVTLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERK 60
Query: 61 CCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPGSSSTRCPQK 111
CCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPGSSSTRCPQK
Sbjct: 61 CCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPGSSSTRCPQK 111
>gi|4507065 secretory leukocyte peptidase inhibitor precursor
[Homo sapiens]
Length = 132
Score = 56.6 bits (135), Expect = 4e-09
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 1 MGSSSFLVLMVSLVLVTLV--AVEGVKEGIEKAGVCPAD-NVRCFKSDPPQCHTDQDCLG 57
M SS +V L L TL AVEG + KAGVCP + +C + P+C +D C G
Sbjct: 1 MKSSGLFPFLVLLALGTLAPWAVEGSGKSF-KAGVCPPKKSAQCLRYKKPECQSDWQCPG 59
Query: 58 ERKCCYLHCGFKCVIPV 74
+++CC CG KC+ PV
Sbjct: 60 KKRCCPDTCGIKCLDPV 76
Score = 43.1 bits (100), Expect = 5e-05
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 30 KAGVCPADNVRCFKSDPPQ-CHTDQDCLGERKCCYLHCGFKCVIPVK 75
K G CP +C +PP C D C + KCC CG CV PVK
Sbjct: 85 KPGKCPVTYGQCLMLNPPNFCEMDGQCKRDLKCCMGMCGKSCVSPVK 131
>gi|21717822 WAP four-disulfide core domain 5 precursor [Homo
sapiens]
Length = 123
Score = 52.0 bits (123), Expect = 1e-07
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 7 LVLMVSLVLV--TLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYL 64
L+L+ +L+ V L AV G K+G EK+G CP D+ C S P QC D C RKCCY
Sbjct: 6 LLLLGALLAVGSQLPAVFGRKKG-EKSGGCPPDDGPCLLSVPDQCVEDSQCPLTRKCCYR 64
Query: 65 HCGFKCV 71
C +CV
Sbjct: 65 ACFRQCV 71
Score = 50.4 bits (119), Expect = 3e-07
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 30 KAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHCGFKCVIPVK 75
K G CP D +RC CH D DC G+++CC+ CG C P +
Sbjct: 77 KLGSCPEDQLRCLSPMNHLCHKDSDCSGKKRCCHSACGRDCRDPAR 122
>gi|153946389 WAP four-disulfide core domain 8 precursor [Homo
sapiens]
Length = 241
Score = 50.4 bits (119), Expect = 3e-07
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 7 LVLMVSLVLVTLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHC 66
L+L ++L + + + +K K G+CP + + C P C+TD DC +KCC+ C
Sbjct: 27 LLLSLALEWTSAMLTKKIKH---KPGLCPKERLTCTTELPDSCNTDFDCKEYQKCCFFAC 83
Query: 67 GFKCVIPVKE 76
KC+ P +E
Sbjct: 84 QKKCMDPFQE 93
Score = 46.6 bits (109), Expect = 4e-06
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 30 KAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHCGFKCVIP 73
K G CP + C K D P+C D++C KCC HCG KC+ P
Sbjct: 197 KKGFCPRKPLLCTKIDKPKCLQDEECPLVEKCC-SHCGLKCMDP 239
Score = 43.5 bits (101), Expect = 4e-05
Identities = 20/43 (46%), Positives = 21/43 (48%)
Query: 28 IEKAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHCGFKC 70
I K G CP K PP CH+D DC KCC CGF C
Sbjct: 148 IVKDGQCPLFPFTERKECPPSCHSDIDCPQTDKCCESRCGFVC 190
>gi|153946387 WAP four-disulfide core domain 8 precursor [Homo
sapiens]
Length = 241
Score = 50.4 bits (119), Expect = 3e-07
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 7 LVLMVSLVLVTLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHC 66
L+L ++L + + + +K K G+CP + + C P C+TD DC +KCC+ C
Sbjct: 27 LLLSLALEWTSAMLTKKIKH---KPGLCPKERLTCTTELPDSCNTDFDCKEYQKCCFFAC 83
Query: 67 GFKCVIPVKE 76
KC+ P +E
Sbjct: 84 QKKCMDPFQE 93
Score = 46.6 bits (109), Expect = 4e-06
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 30 KAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHCGFKCVIP 73
K G CP + C K D P+C D++C KCC HCG KC+ P
Sbjct: 197 KKGFCPRKPLLCTKIDKPKCLQDEECPLVEKCC-SHCGLKCMDP 239
Score = 43.5 bits (101), Expect = 4e-05
Identities = 20/43 (46%), Positives = 21/43 (48%)
Query: 28 IEKAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHCGFKC 70
I K G CP K PP CH+D DC KCC CGF C
Sbjct: 148 IVKDGQCPLFPFTERKECPPSCHSDIDCPQTDKCCESRCGFVC 190
>gi|4505787 elafin preproprotein [Homo sapiens]
Length = 117
Score = 46.6 bits (109), Expect = 4e-06
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 20 AVEGVKEGIE-KAGVCPADNVRCFKSDPP-QCHTDQDCLGERKCCYLHCGFKCVIP 73
A E VK + K G CP +RC +PP +C D DC G +KCC CG C +P
Sbjct: 61 AQEPVKGPVSTKPGSCPIILIRCAMLNPPNRCLKDTDCPGIKKCCEGSCGMACFVP 116
>gi|10732863 serine peptidase inhibitor-like, with Kunitz and WAP
domains 1 isoform 1 precursor [Homo sapiens]
Length = 133
Score = 43.9 bits (102), Expect = 3e-05
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 1 MGSSSFLVLMVSLVLVTLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERK 60
MGSS L L+V VL+ V G+ + + CP C + C D+ C +K
Sbjct: 1 MGSSGLLSLLVLFVLLANVQGPGLTDWLFPRR-CPKIREECEFQERDVCTKDRQCQDNKK 59
Query: 61 CCYLHCGFKCV 71
CC CG KC+
Sbjct: 60 CCVFSCGKKCL 70
>gi|32307109 WAP four-disulfide core domain 3 precursor [Homo
sapiens]
Length = 231
Score = 43.1 bits (100), Expect = 5e-05
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 48 QCHTDQDCLGERKCCYLHCGFKCVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPGSSSTR 107
+C TD+ C G +KCC L C CV+P+ + + E + P P E C G +S
Sbjct: 88 RCITDETCPGVKKCCTLGCNKSCVVPISKQKLAEFGGECPADPLP---CEELCDGDAS-- 142
Query: 108 CPQ 110
CPQ
Sbjct: 143 CPQ 145
Score = 32.0 bits (71), Expect = 0.11
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 29 EKAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHCGFKCV 71
E G CPAD + C + C D C KCC CG C+
Sbjct: 121 EFGGECPADPLPCEEL----CDGDASCPQGHKCCSTGCGRTCL 159
Score = 31.6 bits (70), Expect = 0.14
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 7 LVLMVSLVLVTLVAVEGVKEGIE-----KAGVCPADNVRCFKSDPPQCHTDQDCLGERKC 61
++L +L L+A+ ++ I K G CP C + C D+ C E+KC
Sbjct: 1 MMLSCLFLLKALLALGSLESWITAGEHAKEGECPPHKNPCKEL----CQGDELCPAEQKC 56
Query: 62 CYLHCGFKCVIPVKELEEGGNKD 84
C CG C +++ +G +D
Sbjct: 57 CTTGCGRIC----RDIPKGRKRD 75
Score = 30.0 bits (66), Expect = 0.42
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 49 CHTDQDCLGERKCCYLHCGFKCVIPV 74
C D++C KCC CG CV PV
Sbjct: 182 CVMDENCQAGEKCCKSGCGRFCVPPV 207
>gi|56699495 WAP four-disulfide core domain 2 precursor [Homo
sapiens]
Length = 124
Score = 42.7 bits (99), Expect = 6e-05
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 15/101 (14%)
Query: 9 LMVSLVLVTLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHCGF 68
L++SL+L V G G EK GVCP ++ ++ +C +D +C KCC C
Sbjct: 13 LLLSLLLFGFTLVSGT--GAEKTGVCP--ELQADQNCTQECVSDSECADNLKCCSAGCAT 68
Query: 69 KCVIPVKELEEGGNKDEDVSRPYPEPGW-------EAKCPG 102
C +P +EG +++ +P+ G +++CPG
Sbjct: 69 FCSLP--NDKEGSCPQVNIN--FPQLGLCRDQCQVDSQCPG 105
>gi|22779936 WAP four-disulfide core domain 6 precursor [Homo
sapiens]
Length = 86
Score = 40.8 bits (94), Expect = 2e-04
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 1 MGSSSFLVLMVSLVLVTLVAVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERK 60
MG S L ++V +L+ + G EGI CP V C + QC +DC K
Sbjct: 1 MGLSGLLPILVPFILLGDIQEPGHAEGI-LGKPCPKIKVECEVEEIDQCTKPRDCPENMK 59
Query: 61 CCYLHCGFKCV 71
CC G KC+
Sbjct: 60 CCPFSRGKKCL 70
>gi|119395746 Kallmann syndrome 1 protein precursor [Homo sapiens]
Length = 680
Score = 36.6 bits (83), Expect = 0.004
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
Query: 30 KAGVCPADN------VRCFKSDPPQCHTDQDCLGERKCCYLHCGFKCVIPVKELEEG 80
K G CPA C +S C D +C G +KCC CG C +P K L +G
Sbjct: 130 KQGDCPAPEKASGFAAACVES----CEVDNECSGVKKCCSNGCGHTCQVP-KTLYKG 181
>gi|31563528 serine peptidase inhibitor-like, with Kunitz and WAP
domains 1 isoform 2 [Homo sapiens]
Length = 117
Score = 36.2 bits (82), Expect = 0.006
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 32 GVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHCGFKCV 71
G CP C + C D+ C +KCC CG KC+
Sbjct: 15 GRCPKIREECEFQERDVCTKDRQCQDNKKCCVFSCGKKCL 54
>gi|28212222 WFIKKN2 protein [Homo sapiens]
Length = 576
Score = 36.2 bits (82), Expect = 0.006
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 31 AGVCPADN-----VRCFKSDPPQCHTDQDCLGERKCCYLHCGFKCVIPVKELEEGGNK 83
AG+CP D V + +C TDQ+C KCC CG K + + ++ G K
Sbjct: 43 AGICPNDMNPNLWVDAQSTCRRECETDQECETYEKCCPNVCGTKSCVAARYMDVKGKK 100
>gi|16751923 WAP, follistatin/kazal, immunoglobulin, kunitz and
netrin domain containing 1 precursor [Homo sapiens]
Length = 548
Score = 33.1 bits (74), Expect = 0.049
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 9 LMVSLVLVTLVAVEGVKEGI-EKAGVCPADN-----VRCFKSDPPQCHTDQDCLGERKCC 62
L+ L+L+ L + G+ G+ GVCP V + +C DQDC KCC
Sbjct: 7 LLPLLLLLRLTSGAGLLPGLGSHPGVCPNQLSPNLWVDAQSTCERECSRDQDCAAAEKCC 66
Query: 63 YLHCGF-KCV 71
CG CV
Sbjct: 67 INVCGLHSCV 76
>gi|18379353 WAP four-disulfide core domain 1 precursor [Homo
sapiens]
Length = 220
Score = 31.6 bits (70), Expect = 0.14
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 48 QCHTDQDCLGERKCCYLHCGFKCV 71
+C D +C R+CCY C + C+
Sbjct: 82 RCQADSECPRHRRCCYNGCAYACL 105
>gi|145580584 uromodulin-like 1 isoform 1 precursor [Homo sapiens]
Length = 1318
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 30 KAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHCGFKCVIPVKELEE 79
+ G CPA+ S C D DC G KCC G C+ P + E
Sbjct: 117 RPGACPAEGPEPSTSP---CSLDIDCPGLEKCCPWSGGRYCMAPAPQAPE 163
>gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]
Length = 1446
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 30 KAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHCGFKCVIPVKELEE 79
+ G CPA+ S C D DC G KCC G C+ P + E
Sbjct: 117 RPGACPAEGPEPSTSP---CSLDIDCPGLEKCCPWSGGRYCMAPAPQAPE 163
>gi|4759166 secreted phosphoprotein 1 isoform b [Homo sapiens]
Length = 300
Score = 31.2 bits (69), Expect = 0.19
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 62 CYLHCGFKCVIPVKELEEGGNKDEDVSRPYPE 93
C+ G C IPVK+ + G ++++ + YP+
Sbjct: 7 CFCLLGITCAIPVKQADSGSSEEKQLYNKYPD 38
>gi|91206462 secreted phosphoprotein 1 isoform a [Homo sapiens]
Length = 314
Score = 31.2 bits (69), Expect = 0.19
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 62 CYLHCGFKCVIPVKELEEGGNKDEDVSRPYPE 93
C+ G C IPVK+ + G ++++ + YP+
Sbjct: 7 CFCLLGITCAIPVKQADSGSSEEKQLYNKYPD 38
>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
sapiens]
Length = 756
Score = 28.1 bits (61), Expect = 1.6
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 11/92 (11%)
Query: 20 AVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHCGFKCVIPVKELEE 79
A++ VK + K + ++ PPQ + + CLGE KC + +
Sbjct: 511 ALQKVKYFVAKEDPSSQEEAHTPEAPPPQPPSSERCLGEMKCTLVRG-----------DS 559
Query: 80 GGNKDEDVSRPYPEPGWEAKCPGSSSTRCPQK 111
+ E S P P E P +T P++
Sbjct: 560 SPRQAELKSGPASRPALEKPHPHEEATTLPEE 591
>gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [Homo
sapiens]
Length = 645
Score = 28.1 bits (61), Expect = 1.6
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 11/92 (11%)
Query: 20 AVEGVKEGIEKAGVCPADNVRCFKSDPPQCHTDQDCLGERKCCYLHCGFKCVIPVKELEE 79
A++ VK + K + ++ PPQ + + CLGE KC + +
Sbjct: 400 ALQKVKYFVAKEDPSSQEEAHTPEAPPPQPPSSERCLGEMKCTLVRG-----------DS 448
Query: 80 GGNKDEDVSRPYPEPGWEAKCPGSSSTRCPQK 111
+ E S P P E P +T P++
Sbjct: 449 SPRQAELKSGPASRPALEKPHPHEEATTLPEE 480
>gi|224282119 splicing factor, arginine/serine-rich 14 [Homo
sapiens]
Length = 1082
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 70 CVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPGSSSTRCPQK 111
C + VK+ E ++E+ P +P +AK P S S PQ+
Sbjct: 540 CPLQVKKAEPEPMREEEKMIPPTKPEIQAKAPSSLSDAVPQR 581
>gi|224282117 splicing factor, arginine/serine-rich 14 [Homo
sapiens]
Length = 1082
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 70 CVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPGSSSTRCPQK 111
C + VK+ E ++E+ P +P +AK P S S PQ+
Sbjct: 540 CPLQVKKAEPEPMREEEKMIPPTKPEIQAKAPSSLSDAVPQR 581
>gi|162417982 zinc finger protein 64 isoform d [Homo sapiens]
Length = 645
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 46 PPQCHTDQDCLGER--KCCYLHCGFKCVIPVKELE 78
P + LGER CCY C FK V +K+L+
Sbjct: 284 PSEAREQMATLGERTFNCCYPGCHFKTVHGMKDLD 318
>gi|194328809 latent transforming growth factor beta binding protein
3 isoform 1 [Homo sapiens]
Length = 1303
Score = 27.7 bits (60), Expect = 2.1
Identities = 22/77 (28%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Query: 44 SDPPQCHTDQDCLGERKCCYLHC-----GFKCVIPVKELE-EGGNKDEDVSRPYP----E 93
S PP C +C C C FKC+ +GG DV+
Sbjct: 696 SRPPVCEDIDECRDPSSCPDGKCENKPGSFKCIACQPGYRSQGGGACRDVNECAEGSPCS 755
Query: 94 PGWEAKCPGSSSTRCPQ 110
PGW PGS C Q
Sbjct: 756 PGWCENLPGSFRCTCAQ 772
>gi|18497288 latent transforming growth factor beta binding protein
3 isoform 2 [Homo sapiens]
Length = 1256
Score = 27.7 bits (60), Expect = 2.1
Identities = 22/77 (28%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Query: 44 SDPPQCHTDQDCLGERKCCYLHC-----GFKCVIPVKELE-EGGNKDEDVSRPYP----E 93
S PP C +C C C FKC+ +GG DV+
Sbjct: 696 SRPPVCEDIDECRDPSSCPDGKCENKPGSFKCIACQPGYRSQGGGACRDVNECAEGSPCS 755
Query: 94 PGWEAKCPGSSSTRCPQ 110
PGW PGS C Q
Sbjct: 756 PGWCENLPGSFRCTCAQ 772
>gi|19743803 fibulin 5 precursor [Homo sapiens]
Length = 448
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 37 DNVRCFKSDPPQC-HTDQDCLGERKCCYLHCGFKCVIPVK 75
DN C D +C H + C ++ C L GFKC+ P++
Sbjct: 282 DNRSC--QDINECEHRNHTCNLQQTCYNLQGGFKCIDPIR 319
>gi|73747881 zinc finger, ZZ type with EF hand domain 1 [Homo sapiens]
Length = 2961
Score = 27.3 bits (59), Expect = 2.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 76 ELEEGGNKDEDVSRPYPEPG 95
EL+E G+++E+V RP PG
Sbjct: 2427 ELDERGDREEEVERPVSSPG 2446
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 54 DCLGERKCCYLHCGF----KCVIPVKELEEGGNKDEDVSRPYPEPGWEAKCPG 102
DC + KC + HC F V+ + +++ K E R EP E PG
Sbjct: 1561 DCKYKLKCSHFHCTFPGCRHTVVGMSQMDSHKRKHEKQER--GEPAAEGPAPG 1611
>gi|195947389 autotaxin isoform 3 preproprotein [Homo sapiens]
Length = 888
Score = 26.9 bits (58), Expect = 3.5
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 34 CPADNVRCFKSDPPQCHTDQDCLGERKCC 62
C D +++ CH +DCL CC
Sbjct: 103 CTKDRCGEVRNEENACHCSEDCLARGDCC 131
Score = 25.8 bits (55), Expect = 7.8
Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Query: 40 RCFK---SDPPQCHTDQDCLGERKCCY 63
RCF+ + PP C D C CC+
Sbjct: 62 RCFELQEAGPPDCRCDNLCKSYTSCCH 88
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.138 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,500,089
Number of Sequences: 37866
Number of extensions: 276195
Number of successful extensions: 642
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 579
Number of HSP's gapped (non-prelim): 73
length of query: 111
length of database: 18,247,518
effective HSP length: 81
effective length of query: 30
effective length of database: 15,180,372
effective search space: 455411160
effective search space used: 455411160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.