Search of human proteins with 199560536

Search of human proteins with 199560536

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|199560536 hypothetical protein LOC283643 isoform 4 [Homo
sapiens]
         (352 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|199560536 hypothetical protein LOC283643 isoform 4 [Homo sapi...   714   0.0  
gi|199560438 hypothetical protein LOC283643 isoform 2 [Homo sapi...   696   0.0  
gi|199560355 hypothetical protein LOC283643 isoform 1 [Homo sapi...   679   0.0  
gi|112382239 desmuslin isoform B [Homo sapiens]                        41   0.001
gi|112382237 desmuslin isoform A [Homo sapiens]                        41   0.001
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap...    40   0.004
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap...    40   0.004
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap...    40   0.004
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi...    40   0.004
gi|27894378 chloride intracellular channel 6 [Homo sapiens]            37   0.027
gi|169203406 PREDICTED: hypothetical protein [Homo sapiens]            36   0.045
gi|169202578 PREDICTED: hypothetical protein [Homo sapiens]            36   0.045
gi|157785645 SPEG complex locus [Homo sapiens]                         35   0.077
gi|197382472 actin filament associated protein 1 isoform a [Homo...    34   0.23 
gi|40807504 actin filament associated protein 1 [Homo sapiens]         34   0.23 
gi|115583657 hypothetical protein LOC150368 [Homo sapiens]             33   0.29 
gi|56676397 ankyrin repeat domain 11 [Homo sapiens]                    33   0.50 
gi|226495417 coiled-coil domain containing 102A [Homo sapiens]         32   0.66 
gi|208022661 hypothetical protein LOC57701 [Homo sapiens]              32   0.86 
gi|30039694 zinc finger protein 598 [Homo sapiens]                     32   0.86 
gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapi...    31   1.5  
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ...    31   1.5  
gi|11321642 bromodomain containing protein 1 [Homo sapiens]            31   1.5  
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    31   1.9  
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    31   1.9  
gi|145701005 hypothetical protein LOC375759 [Homo sapiens]             31   1.9  
gi|23238194 tumor necrosis factor receptor superfamily, member 1...    30   2.5  
gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]        30   2.5  
gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]        30   2.5  
gi|40068479 mitochondrial rRNA methyltransferase 1 homolog [Homo...    30   2.5  

>gi|199560536 hypothetical protein LOC283643 isoform 4 [Homo
           sapiens]
          Length = 352

 Score =  714 bits (1843), Expect = 0.0
 Identities = 352/352 (100%), Positives = 352/352 (100%)

Query: 1   MSGQRGDWTSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPE 60
           MSGQRGDWTSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPE
Sbjct: 1   MSGQRGDWTSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPE 60

Query: 61  DGSQGSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEG 120
           DGSQGSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEG
Sbjct: 61  DGSQGSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEG 120

Query: 121 PVDVRHVQWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFW 180
           PVDVRHVQWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFW
Sbjct: 121 PVDVRHVQWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFW 180

Query: 181 RWMDTVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAW 240
           RWMDTVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAW
Sbjct: 181 RWMDTVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAW 240

Query: 241 EAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGD 300
           EAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGD
Sbjct: 241 EAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGD 300

Query: 301 RDLRAAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIWIPPPGR 352
           RDLRAAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIWIPPPGR
Sbjct: 301 RDLRAAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIWIPPPGR 352


>gi|199560438 hypothetical protein LOC283643 isoform 2 [Homo
           sapiens]
          Length = 393

 Score =  696 bits (1797), Expect = 0.0
 Identities = 345/348 (99%), Positives = 346/348 (99%)

Query: 5   RGDWTSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQ 64
           R + TSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQ
Sbjct: 46  RPEATSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQ 105

Query: 65  GSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDV 124
           GSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDV
Sbjct: 106 GSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDV 165

Query: 125 RHVQWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMD 184
           RHVQWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMD
Sbjct: 166 RHVQWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMD 225

Query: 185 TVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKA 244
           TVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKA
Sbjct: 226 TVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKA 285

Query: 245 GGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDRDLR 304
           GGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDRDLR
Sbjct: 286 GGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDRDLR 345

Query: 305 AAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIWIPPPGR 352
           AAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIWIPPPGR
Sbjct: 346 AAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIWIPPPGR 393


>gi|199560355 hypothetical protein LOC283643 isoform 1 [Homo
           sapiens]
          Length = 426

 Score =  679 bits (1753), Expect = 0.0
 Identities = 345/381 (90%), Positives = 346/381 (90%), Gaps = 33/381 (8%)

Query: 5   RGDWTSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQ 64
           R + TSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQ
Sbjct: 46  RPEATSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQ 105

Query: 65  GSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDV 124
           GSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDV
Sbjct: 106 GSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDV 165

Query: 125 RHVQWLMGKLRFRWRQLVSSQQEQCALLSK------------------------------ 154
           RHVQWLMGKLRFRWRQLVSSQQEQCALLSK                              
Sbjct: 166 RHVQWLMGKLRFRWRQLVSSQQEQCALLSKIHLYTRGCHSDQSLSHLSVTEAEMLRDPEG 225

Query: 155 ---LLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLPWVPERG 211
              LLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLPWVPERG
Sbjct: 226 GQQLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLPWVPERG 285

Query: 212 GGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGAL 271
           GGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGAL
Sbjct: 286 GGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGAL 345

Query: 272 QQCWERDGGPAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAVLRRLQGQCR 331
           QQCWERDGGPAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAVLRRLQGQCR
Sbjct: 346 QQCWERDGGPAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAVLRRLQGQCR 405

Query: 332 QELARLVGARPGLIWIPPPGR 352
           QELARLVGARPGLIWIPPPGR
Sbjct: 406 QELARLVGARPGLIWIPPPGR 426


>gi|112382239 desmuslin isoform B [Homo sapiens]
          Length = 1253

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 41/120 (34%), Positives = 52/120 (43%), Gaps = 13/120 (10%)

Query: 156 LRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLPWVPERGGGEL 215
           +R LEREN  LE  L  RR     W         CA E  +   Q   L W      GE 
Sbjct: 29  VRELERENLLLEEELRGRRGREGLWAEGQA---RCAEEARSLRQQLDELSWATALAEGER 85

Query: 216 DLV---VRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQ 272
           D +   +RELQ L+ E R A    R   +A+ G   R  + +   RA+ EA+   LG LQ
Sbjct: 86  DALRRELRELQRLDAEERAA----RGRLDAELGAQQRELQEALGARAALEAL---LGRLQ 138


>gi|112382237 desmuslin isoform A [Homo sapiens]
          Length = 1565

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 41/120 (34%), Positives = 52/120 (43%), Gaps = 13/120 (10%)

Query: 156 LRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLPWVPERGGGEL 215
           +R LEREN  LE  L  RR     W         CA E  +   Q   L W      GE 
Sbjct: 29  VRELERENLLLEEELRGRRGREGLWAEGQA---RCAEEARSLRQQLDELSWATALAEGER 85

Query: 216 DLV---VRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQ 272
           D +   +RELQ L+ E R A    R   +A+ G   R  + +   RA+ EA+   LG LQ
Sbjct: 86  DALRRELRELQRLDAEERAA----RGRLDAELGAQQRELQEALGARAALEAL---LGRLQ 138


>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
           sapiens]
          Length = 1293

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 73/277 (26%), Positives = 109/277 (39%), Gaps = 55/277 (19%)

Query: 93  PLGDEMTVCQCEALASPGP-PAPHM------------EAEGPVDVRHVQWLMGKLRFRWR 139
           PLGD M +       SPGP P PHM            E      ++H+Q+    ++ ++ 
Sbjct: 573 PLGDIMKMWG-RVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYA 631

Query: 140 QLV---------SSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTC 190
           Q++         S QQ+Q ALL +  +TL+        + +  RS  V     DT     
Sbjct: 632 QVLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSV----PDT---GS 684

Query: 191 APEVPAAASQPTFLPWVPERGGGELDL---------VVRELQALEEELREAAERRRAAWE 241
             E+   ASQPT   W    GG   DL          + +LQ LE+      E+ R   E
Sbjct: 685 IWELQPTASQPTV--W---EGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAE 739

Query: 242 AKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDR 301
            +A    +  E    R+      ++E+   QQ  ER     +      L RR+   A  R
Sbjct: 740 MRA----KREEEERKRQEELRRQQEEILRRQQEEER-----KRREEEELARRKQEEALRR 790

Query: 302 DLRAAVVIRTLRSQE--ACLEAVLRRLQGQCRQELAR 336
                + +R  R +E     E  LRRL+ + R+E  R
Sbjct: 791 QREQEIALRRQREEEERQQQEEALRRLEERRREEEER 827


>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
           sapiens]
          Length = 1320

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 73/277 (26%), Positives = 109/277 (39%), Gaps = 55/277 (19%)

Query: 93  PLGDEMTVCQCEALASPGP-PAPHM------------EAEGPVDVRHVQWLMGKLRFRWR 139
           PLGD M +       SPGP P PHM            E      ++H+Q+    ++ ++ 
Sbjct: 600 PLGDIMKMWG-RVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYA 658

Query: 140 QLV---------SSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTC 190
           Q++         S QQ+Q ALL +  +TL+        + +  RS  V     DT     
Sbjct: 659 QVLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSV----PDT---GS 711

Query: 191 APEVPAAASQPTFLPWVPERGGGELDL---------VVRELQALEEELREAAERRRAAWE 241
             E+   ASQPT   W    GG   DL          + +LQ LE+      E+ R   E
Sbjct: 712 IWELQPTASQPTV--W---EGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAE 766

Query: 242 AKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDR 301
            +A    +  E    R+      ++E+   QQ  ER     +      L RR+   A  R
Sbjct: 767 MRA----KREEEERKRQEELRRQQEEILRRQQEEER-----KRREEEELARRKQEEALRR 817

Query: 302 DLRAAVVIRTLRSQE--ACLEAVLRRLQGQCRQELAR 336
                + +R  R +E     E  LRRL+ + R+E  R
Sbjct: 818 QREQEIALRRQREEEERQQQEEALRRLEERRREEEER 854


>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
           sapiens]
          Length = 1299

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 73/277 (26%), Positives = 109/277 (39%), Gaps = 55/277 (19%)

Query: 93  PLGDEMTVCQCEALASPGP-PAPHM------------EAEGPVDVRHVQWLMGKLRFRWR 139
           PLGD M +       SPGP P PHM            E      ++H+Q+    ++ ++ 
Sbjct: 579 PLGDIMKMWG-RVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYA 637

Query: 140 QLV---------SSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTC 190
           Q++         S QQ+Q ALL +  +TL+        + +  RS  V     DT     
Sbjct: 638 QVLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSV----PDT---GS 690

Query: 191 APEVPAAASQPTFLPWVPERGGGELDL---------VVRELQALEEELREAAERRRAAWE 241
             E+   ASQPT   W    GG   DL          + +LQ LE+      E+ R   E
Sbjct: 691 IWELQPTASQPTV--W---EGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAE 745

Query: 242 AKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDR 301
            +A    +  E    R+      ++E+   QQ  ER     +      L RR+   A  R
Sbjct: 746 MRA----KREEEERKRQEELRRQQEEILRRQQEEER-----KRREEEELARRKQEEALRR 796

Query: 302 DLRAAVVIRTLRSQE--ACLEAVLRRLQGQCRQELAR 336
                + +R  R +E     E  LRRL+ + R+E  R
Sbjct: 797 QREQEIALRRQREEEERQQQEEALRRLEERRREEEER 833


>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
           sapiens]
          Length = 1299

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 73/277 (26%), Positives = 109/277 (39%), Gaps = 55/277 (19%)

Query: 93  PLGDEMTVCQCEALASPGP-PAPHM------------EAEGPVDVRHVQWLMGKLRFRWR 139
           PLGD M +       SPGP P PHM            E      ++H+Q+    ++ ++ 
Sbjct: 579 PLGDIMKMWG-RVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYA 637

Query: 140 QLV---------SSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTC 190
           Q++         S QQ+Q ALL +  +TL+        + +  RS  V     DT     
Sbjct: 638 QVLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSV----PDT---GS 690

Query: 191 APEVPAAASQPTFLPWVPERGGGELDL---------VVRELQALEEELREAAERRRAAWE 241
             E+   ASQPT   W    GG   DL          + +LQ LE+      E+ R   E
Sbjct: 691 IWELQPTASQPTV--W---EGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAE 745

Query: 242 AKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDR 301
            +A    +  E    R+      ++E+   QQ  ER     +      L RR+   A  R
Sbjct: 746 MRA----KREEEERKRQEELRRQQEEILRRQQEEER-----KRREEEELARRKQEEALRR 796

Query: 302 DLRAAVVIRTLRSQE--ACLEAVLRRLQGQCRQELAR 336
                + +R  R +E     E  LRRL+ + R+E  R
Sbjct: 797 QREQEIALRRQREEEERQQQEEALRRLEERRREEEER 833


>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
          Length = 686

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 67/244 (27%), Positives = 84/244 (34%), Gaps = 53/244 (21%)

Query: 78  ARGPVPEQMLAQARV--------PLGD--EMTVCQCEALASPGPPAPHMEAEGPVDVRHV 127
           A GP  + + A+ RV        P GD  E  V   +++ + GP    M+AEGP      
Sbjct: 232 AEGPAGDSVDAEGRVGDSVEAGDPAGDGVEAGVPAGDSVEAEGPAGDSMDAEGPA----- 286

Query: 128 QWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLE----RENQRLEAVLAWRRSELVFWRWM 183
               G+ R   R     QQ     LS     +E        R    LAW  +E       
Sbjct: 287 ----GRAR---RVSGEPQQSGDGSLSPQAEAIEVAAGESAGRSPGELAWDAAE------- 332

Query: 184 DTVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAA---- 239
                    EVP         P       GE     R     ++E  E  ERR  +    
Sbjct: 333 -------EAEVPGVKGSEEAAPGDARADAGE----DRVGDGPQQEPGEDEERRERSPEGP 381

Query: 240 -WEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLV--RREDG 296
             E  AGG    P+ S    ASR A E E        E   GPA+  G    V  RREDG
Sbjct: 382 REEEAAGGEEESPDSSPHGEASRGAAEPEAQLSNHLAEE--GPAEGSGEAARVNGRREDG 439

Query: 297 AAGD 300
            A +
Sbjct: 440 EASE 443



 Score = 30.8 bits (68), Expect = 1.9
 Identities = 31/90 (34%), Positives = 35/90 (38%), Gaps = 9/90 (10%)

Query: 192 PEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGP 251
           PEVPA  ++    P  P   GGE      E     E   EA     A  EA  GG  RGP
Sbjct: 18  PEVPAPLAER---PGEPGAAGGEA-----EGPEGSEGAEEAPRGAAAVKEAGGGGPDRGP 69

Query: 252 EWSA-ARRASREAVEKELGALQQCWERDGG 280
           E  A   R +    E E GA +      GG
Sbjct: 70  EAEARGTRGAHGETEAEEGAPEGAEVPQGG 99


>gi|169203406 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 145

 Score = 36.2 bits (82), Expect = 0.045
 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 188 GTCAPEVPAAASQPTF--LPWVPERGGGELDLVVRELQALEEEL-REAAERRRAAWEAKA 244
           G C P   AAA  P    LP  P+ GGG  DL+   L  + E + R   ERR++  + K+
Sbjct: 66  GACGPGAGAAAPAPAAASLPEEPDGGGGPDDLLPLPLWLVAEGIFRPQGERRKSGRKDKS 125

Query: 245 GGCGRG 250
           G  G G
Sbjct: 126 GQSGDG 131


>gi|169202578 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 145

 Score = 36.2 bits (82), Expect = 0.045
 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 188 GTCAPEVPAAASQPTF--LPWVPERGGGELDLVVRELQALEEEL-REAAERRRAAWEAKA 244
           G C P   AAA  P    LP  P+ GGG  DL+   L  + E + R   ERR++  + K+
Sbjct: 66  GACGPGAGAAAPAPAAASLPEEPDGGGGPDDLLPLPLWLVAEGIFRPQGERRKSGRKDKS 125

Query: 245 GGCGRG 250
           G  G G
Sbjct: 126 GQSGDG 131


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 35.4 bits (80), Expect = 0.077
 Identities = 43/144 (29%), Positives = 55/144 (38%), Gaps = 22/144 (15%)

Query: 191  APE--VPAAASQPTF-----LPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAK 243
            APE  VP+A   P       +P VP R G  L   +  L++             A +EAK
Sbjct: 2289 APEKRVPSAGGPPVLAEKARVPTVPPRPGSSLSSSIENLES------------EAVFEAK 2336

Query: 244  AGGCGRGPEWSAARRASREAVEKELGALQQCWERDG--GPAQPHGPHRLVRREDGAAGDR 301
                   P     R  SR   E E G  +   E DG   P+    P  LVRR + +   +
Sbjct: 2337 FKRSRESPLSLGLRLLSRSRSE-ERGPFRGAEEEDGIYRPSPAGTPLELVRRPERSRSVQ 2395

Query: 302  DLRAAVVIRTLRSQEACLEAVLRR 325
            DLRA      +R     L   LRR
Sbjct: 2396 DLRAVGEPGLVRRLSLSLSQRLRR 2419



 Score = 29.6 bits (65), Expect = 4.3
 Identities = 62/254 (24%), Positives = 86/254 (33%), Gaps = 40/254 (15%)

Query: 18   RVLSPLPAGNALASLALEVQ--ARLVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSW 75
            R   P P   AL +LAL +   A++++S   S        AQ P  G           + 
Sbjct: 2224 RASKPAPPPQALQTLALPLTPYAQIIQSLQLS------GHAQGPSQGPAAPPSEPKPHAA 2277

Query: 76   LLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLR 135
            + AR   P     + RVP      V   +A     PP P       ++    + +     
Sbjct: 2278 VFARVASPPPGAPEKRVPSAGGPPVLAEKARVPTVPPRPGSSLSSSIENLESEAVFEAKF 2337

Query: 136  FRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVP 195
             R R+         + LS  LR L R              E   +R             P
Sbjct: 2338 KRSRE---------SPLSLGLRLLSRSRSEERGPFRGAEEEDGIYR-------------P 2375

Query: 196  AAASQPTFLPWVPERGG--------GELDLVVRELQALEEELREAAE-RRRAAWEAKAGG 246
            + A  P  L   PER          GE  LV R   +L + LR     +R  AWEA+ GG
Sbjct: 2376 SPAGTPLELVRRPERSRSVQDLRAVGEPGLVRRLSLSLSQRLRRTPPAQRHPAWEAR-GG 2434

Query: 247  CGRGPEWSAARRAS 260
             G   E  ++ R S
Sbjct: 2435 DGESSEGGSSARGS 2448


>gi|197382472 actin filament associated protein 1 isoform a [Homo
           sapiens]
          Length = 814

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 301 RDLRAAVVIRTLRSQEACLEAVLRRLQGQCRQELARLV 338
           +DLRAA+ +   R  +A LE  L++L+ +CRQ+ A  V
Sbjct: 677 KDLRAAIEVNAGRKPQAILEEKLKQLEEECRQKEAERV 714


>gi|40807504 actin filament associated protein 1 [Homo sapiens]
          Length = 730

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 301 RDLRAAVVIRTLRSQEACLEAVLRRLQGQCRQELARLV 338
           +DLRAA+ +   R  +A LE  L++L+ +CRQ+ A  V
Sbjct: 593 KDLRAAIEVNAGRKPQAILEEKLKQLEEECRQKEAERV 630


>gi|115583657 hypothetical protein LOC150368 [Homo sapiens]
          Length = 259

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)

Query: 191 APEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREA-AERRRAAWEAKAGGC-G 248
           A E PAA  Q  ++  +     G + LVVREL++  ++ R++ A +RR++W++ A  C  
Sbjct: 102 AAEGPAA--QEAWVKVLSRASFGYMRLVVRELESQLQDARQSLALQRRSSWKSVASRCKP 159

Query: 249 RGPEWSAARRASREAVEKE---LGALQQCWERDGG 280
           + P   AA   +   + K+   +G +++   R  G
Sbjct: 160 QAPNHRAAGLENGHCLSKDSSPVGLVEEAGSRSAG 194


>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
          Length = 2663

 Score = 32.7 bits (73), Expect = 0.50
 Identities = 23/68 (33%), Positives = 30/68 (44%)

Query: 229 LREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPH 288
           L + +E+R+   E      G   E    RR S EA      AL+ C ER  G A+P   H
Sbjct: 913 LDKNSEKRKEQTEKHKSVPGYLSEKDKKRRESAEAGRDRKDALESCKERRDGRAKPEEAH 972

Query: 289 RLVRREDG 296
           R   +E G
Sbjct: 973 REELKECG 980


>gi|226495417 coiled-coil domain containing 102A [Homo sapiens]
          Length = 550

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 10/126 (7%)

Query: 135 RFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTC--AP 192
           R R R+ V   +++   L+K L    RE Q  +     R  EL   R    V       P
Sbjct: 115 RNRAREEVRQLRQRLDALTKELAGARRERQEAQGECEARGRELARLRGARGVADQTRDGP 174

Query: 193 EVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPE 252
           E P A  +P          G E     +EL+ +E  L+   E     WEA++ G G GP 
Sbjct: 175 E-PEAEREPV------RDVGSERPPGSQELELVESLLKSMPEESEDCWEARSLGAG-GPR 226

Query: 253 WSAARR 258
            S+ R+
Sbjct: 227 GSSGRQ 232


>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
          Length = 1334

 Score = 32.0 bits (71), Expect = 0.86
 Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 16/106 (15%)

Query: 146 QEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLP 205
           +E+C  L K +  LER+NQ L A         +F + +    G+  P++P    QP    
Sbjct: 80  REECIKLKKRVFDLERQNQMLSA---------LFQQKLQLTTGS-LPQIPLTPLQP---- 125

Query: 206 WVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGP 251
             P        L   E  A    L   A +R   WE +    G GP
Sbjct: 126 --PSEPPASPSLSSTEGPAAPLPLGHCAGQREVCWEQQLRPGGPGP 169


>gi|30039694 zinc finger protein 598 [Homo sapiens]
          Length = 904

 Score = 32.0 bits (71), Expect = 0.86
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 12/99 (12%)

Query: 214 ELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQQ 273
           E+D   R+ +      R A + RR +W  K     R  E +AA RAS  A ++E     +
Sbjct: 308 EVDRYSRQGRVARAGTRGAQQSRRGSWRYKREEEDR--EVAAAVRASVAAQQQEEARRSE 365

Query: 274 CWERDG----------GPAQPHGPHRLVRREDGAAGDRD 302
             E  G          GP  P GP R  R +    G ++
Sbjct: 366 DQEEGGRPKKEEAAARGPEDPRGPRRSPRTQGEGPGPKE 404


>gi|157738667 FYVE and coiled-coil domain containing 1 [Homo
           sapiens]
          Length = 1478

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 47/231 (20%)

Query: 139 RQLVSSQQEQCALLSKLLRTLERENQRLEAVLAW----------RRSELVFWR------- 181
           R+    QQE+  LL + +R+L R+ Q LE  LA           ++ +L+  +       
Sbjct: 491 RREKKQQQEEKELLEQEVRSLTRQLQFLETQLAQVSQHVSDLEEQKKQLIQDKDHLSQQV 550

Query: 182 -WMDTVLGTCAPEVPAAASQPTFL-------------PWVPERGGGELDLVVRELQ--AL 225
             ++ + G   PE+P A  +   L             P   +RG  E  L   ++Q  + 
Sbjct: 551 GMLERLAGPPGPELPVAGEKNEALVPVNSSLQEAWGKPEEEQRGLQEAQLDDTKVQEGSQ 610

Query: 226 EEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPH 285
           EEELR+A        +   G          A +A  +A+++   A+Q      G  A   
Sbjct: 611 EEELRQANRELEKELQNVVGRNQLLEGKLQALQADYQALQQRESAIQ------GSLASLE 664

Query: 286 GPHRLVRREDGAAGDRDLRAAVVIR----TLRSQEACLEAVLRRLQGQCRQ 332
                +R      GD+   + + +R     +++Q A  EA+L+  +G+C+Q
Sbjct: 665 AEQASIRH----LGDQMEASLLAVRKAKEAMKAQMAEKEAILQSKEGECQQ 711


>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
            sapiens]
          Length = 1983

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 36/127 (28%), Positives = 48/127 (37%), Gaps = 20/127 (15%)

Query: 212  GGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGAL 271
            G ++   ++ELQA  EEL E  E  RAA               A     R    +EL  L
Sbjct: 1150 GAQMQKKIKELQARAEELEEELEAERAA--------------RARVEKQRAEAARELEEL 1195

Query: 272  QQCWERDGGPAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAVLRRLQGQCR 331
             +  E  GG +   G     R+ +   G   LR  +    LR +     A LRR Q +  
Sbjct: 1196 SERLEEAGGASA--GQREGCRKREAELG--RLRRELEEAALRHEATV--AALRRKQAEGA 1249

Query: 332  QELARLV 338
             EL   V
Sbjct: 1250 AELGEQV 1256


>gi|11321642 bromodomain containing protein 1 [Homo sapiens]
          Length = 1058

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 12/116 (10%)

Query: 183 MDTVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEA 242
           ++   G   PE PAAA +  F  W  E     LD   R    LEE+LRE  +        
Sbjct: 675 LEEASGMHLPERPAAAPRRPF-SW--EDVDRLLDPANRAHLGLEEQLRELLDMLDLTCAM 731

Query: 243 KAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAA 298
           K+ G       S ++RA  + ++KE+  L+    +      P GP      EDGAA
Sbjct: 732 KSSG-------SRSKRA--KLLKKEIALLRNKLSQQHSQPLPTGPGLEGFEEDGAA 778


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 3/145 (2%)

Query: 29   LASLALEVQAR-LVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLARGPVPEQML 87
            LA +AL+++ R  ++  +      +    +L     + +++L   L+ L A+     Q  
Sbjct: 5329 LAEVALDLKIRDQIQDKIKEVEQSKATSQELSRQIQKLAKDLTTILTKLKAKTDNVVQAK 5388

Query: 88   AQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWRQLVSSQQE 147
               +V LG+E+  C  + +         +E  G +  + +   +GKL    +Q +   + 
Sbjct: 5389 TDQKV-LGEELDGCNSKLMELDAAVQKFLEQNGQLG-KPLAKKIGKLTELHQQTIRQAEN 5446

Query: 148  QCALLSKLLRTLERENQRLEAVLAW 172
            + + L++    LE  N+ LE +L W
Sbjct: 5447 RLSKLNQAASHLEEYNEMLELILKW 5471


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 3/145 (2%)

Query: 29   LASLALEVQAR-LVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLARGPVPEQML 87
            LA +AL+++ R  ++  +      +    +L     + +++L   L+ L A+     Q  
Sbjct: 5400 LAEVALDLKIRDQIQDKIKEVEQSKATSQELSRQIQKLAKDLTTILTKLKAKTDNVVQAK 5459

Query: 88   AQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWRQLVSSQQE 147
               +V LG+E+  C  + +         +E  G +  + +   +GKL    +Q +   + 
Sbjct: 5460 TDQKV-LGEELDGCNSKLMELDAAVQKFLEQNGQLG-KPLAKKIGKLTELHQQTIRQAEN 5517

Query: 148  QCALLSKLLRTLERENQRLEAVLAW 172
            + + L++    LE  N+ LE +L W
Sbjct: 5518 RLSKLNQAASHLEEYNEMLELILKW 5542


>gi|145701005 hypothetical protein LOC375759 [Homo sapiens]
          Length = 431

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 38/124 (30%), Positives = 48/124 (38%), Gaps = 27/124 (21%)

Query: 238 AAW----EAKAG-GCGR-GPEWSAARRASREAVEKE-------------LGALQQCWERD 278
           AAW    +AK G G GR  P   A   A+R AV K               GA ++   R 
Sbjct: 59  AAWWPEGDAKPGVGVGRLPPRLPALLTATRRAVRKRGLLRSLLPPPLLSAGASRESAPRQ 118

Query: 279 GGPAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAVLRRLQGQCRQELARLV 338
            GP +   P R V RE     D D   A +   L S+       L +LQ +C +E   L 
Sbjct: 119 PGPGERERPRRRVARE-----DPDFLGAFLGELLPSR---FREFLHQLQEKCAEEPEPLT 170

Query: 339 GARP 342
              P
Sbjct: 171 SPAP 174


>gi|23238194 tumor necrosis factor receptor superfamily, member 18
           isoform 2 precursor [Homo sapiens]
          Length = 255

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 10/64 (15%)

Query: 234 ERRRAAWEAKAGGCGR--GPEWSA--------ARRASREAVEKELGALQQCWERDGGPAQ 283
           +RRR  WE      GR  GP  +A        A  A R A+ + L   QQ W ++GG  Q
Sbjct: 160 QRRRGGWETCGCEPGRPPGPPTAASPSPGAPQAAGALRSALGRALLPWQQKWVQEGGSDQ 219

Query: 284 PHGP 287
             GP
Sbjct: 220 RPGP 223


>gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]
          Length = 625

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 109 PGPPAPHMEAEGPVDVRHVQWLMGK--LRFRWRQLVSSQQEQCALLSKLLRTLERENQRL 166
           PG PAP + A  P+    ++W M K   R  W QL   +  + A  S+L   L + +++L
Sbjct: 123 PGGPAPTVLAPMPLAEVELKWEMEKEEKRLLWEQLQGLESSKQAETSRLQEELAKLSEKL 182

Query: 167 E 167
           +
Sbjct: 183 K 183


>gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]
          Length = 841

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 109 PGPPAPHMEAEGPVDVRHVQWLMGK--LRFRWRQLVSSQQEQCALLSKLLRTLERENQRL 166
           PG PAP + A  P+    ++W M K   R  W QL   +  + A  S+L   L + +++L
Sbjct: 176 PGGPAPTVLAPMPLAEVELKWEMEKEEKRLLWEQLQGLESSKQAETSRLQEELAKLSEKL 235

Query: 167 E 167
           +
Sbjct: 236 K 236


>gi|40068479 mitochondrial rRNA methyltransferase 1 homolog [Homo
           sapiens]
          Length = 353

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%)

Query: 14  QLLFRVLSPLPAGNALASLALEVQARLVKSALCSQ--GYP----RLALAQLPEDGSQGSR 67
           QLL  +L        L SL + V A ++  ++CSQ  G+P    R  L Q P++ S  S 
Sbjct: 272 QLLLTILPRRQLPPGLESLNVSVAAGILLHSICSQRKGFPTEGERRQLLQDPQEPSARSE 331

Query: 68  ELLLALSWLLARGPVPEQ 85
            L +A    L+ GP  E+
Sbjct: 332 GLSMAQHPGLSSGPEKER 349


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,972,478
Number of Sequences: 37866
Number of extensions: 766613
Number of successful extensions: 3247
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 3165
Number of HSP's gapped (non-prelim): 161
length of query: 352
length of database: 18,247,518
effective HSP length: 103
effective length of query: 249
effective length of database: 14,347,320
effective search space: 3572482680
effective search space used: 3572482680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.