Guide to the Human Genome
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Name: FAM109B Sequence: fasta or formatted (259aa) NCBI GI: 115583657
Description:

hypothetical protein LOC150368

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         26           2
 C cysteine            3.1          8           1
 D aspartate           2.7          7           1
 E glutamate           8.5         22           2
 F phenylalanine       3.5          9           1
 G glycine             8.9         23           2
 H histidine           2.7          7           1
 I isoleucine          0.8          2           1
 K lysine              3.5          9           1
 L leucine            10.8         28           3
 M methionine          1.2          3           1
 N asparagine          1.5          4           1
 P proline             6.9         18           2
 Q glutamine           5.0         13           1
 R arginine            7.3         19           2
 S serine             10.4         27           2
 T threonine           2.7          7           1
 V valine              6.2         16           2
 W tryptophan          3.1          8           1
 Y tyrosine            1.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC150368 
FAM109A               0.225   hypothetical protein LOC144717 
RASGRF2               0.045   Ras protein-specific guanine nucleotide-releasing fa...
RASGRF1               0.043   Ras protein-specific guanine nucleotide-releasing f...
RASGRF1               0.043   Ras protein-specific guanine nucleotide-releasing fa...
PLEKHA4               0.039   pleckstrin homology domain containing family A memb...
PLEKHA4               0.039   pleckstrin homology domain containing family A memb...
ARHGAP24              0.027   Rho GTPase activating protein 24 isoform 1 
PLEKHA6               0.023   phosphoinositol 3-phosphate-binding protein-3 
ARHGAP25              0.023   Rho GTPase activating protein 25 isoform a 
ARHGAP25              0.023   Rho GTPase activating protein 25 isoform b 
PLEKHJ1               0.022   pleckstrin homology domain containing, family J membe...
FOXK1                 0.020   forkhead box K1 
ARHGAP22              0.018   Rho GTPase activating protein 2 
C14orf80              0.016   hypothetical protein LOC283643 isoform 4 
C14orf80              0.016   hypothetical protein LOC283643 isoform 2 
C14orf80              0.016   hypothetical protein LOC283643 isoform 1 
CYTH4                 0.016   cytohesin 4 
CYTH3                 0.016   cytohesin 3 
CYTH2                 0.014   cytohesin 2 isoform 1 
CYTH1                 0.014   cytohesin 1 isoform 1 
CYTH2                 0.014   cytohesin 2 isoform 2 
CYTH1                 0.014   cytohesin 1 isoform 2 
FGD5                  0.012   FYVE, RhoGEF and PH domain containing 5 
LOC729575             0.010   PREDICTED: hypothetical protein 
LOC100288110          0.010   PREDICTED: hypothetical protein 
LOC100288110          0.010   PREDICTED: hypothetical protein XP_002343007 
CYTSB                 0.010   spectrin domain with coiled-coils 1 NSP5a3b 
CYTSB                 0.010   spectrin domain with coiled-coils 1 NSP5a3a 
CYTSB                 0.010   spectrin domain with coiled-coils 1 NSP5b3b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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