| Name: CCDC82 | Sequence: fasta or formatted (544aa) | NCBI GI: 19923844 | |
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Description: coiled-coil domain containing 82
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 1.7 9 2 C cysteine 2.0 11 2 D aspartate 9.4 51 2 E glutamate 13.4 73 5 F phenylalanine 2.9 16 1 G glycine 3.9 21 1 H histidine 2.8 15 1 I isoleucine 4.0 22 2 K lysine 8.6 47 1 L leucine 7.9 43 2 M methionine 1.3 7 1 N asparagine 5.1 28 1 P proline 1.5 8 1 Q glutamine 5.9 32 2 R arginine 7.0 38 2 S serine 9.9 54 2 T threonine 4.0 22 2 V valine 4.8 26 2 W tryptophan 0.6 3 1 Y tyrosine 3.3 18 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 coiled-coil domain containing 82 HTATSF1 0.039 HIV-1 Tat specific factor 1 HTATSF1 0.039 HIV-1 Tat specific factor 1 IWS1 0.034 IWS1 homolog LEO1 0.034 Leo1, Paf1/RNA polymerase II complex component, homo... MDN1 0.032 MDN1, midasin homolog LOC283767 0.031 golgi autoantigen, golgin subfamily a-like DSPP 0.031 dentin sialophosphoprotein preproprotein EIF5B 0.031 eukaryotic translation initiation factor 5B ARID4A 0.030 retinoblastoma-binding protein 1 isoform III ARID4A 0.030 retinoblastoma-binding protein 1 isoform II ARID4A 0.030 retinoblastoma-binding protein 1 isoform I LOC100133758 0.030 PREDICTED: hypothetical protein, partial LOC440243 0.030 PREDICTED: Putative golgin subfamily A member 6-lik... TCHH 0.029 trichohyalin SUPT6H 0.029 suppressor of Ty 6 homolog WDR87 0.028 NYD-SP11 protein CALD1 0.028 caldesmon 1 isoform 2 CALD1 0.028 caldesmon 1 isoform 5 RBM25 0.026 RNA binding motif protein 25 ATRX 0.026 transcriptional regulator ATRX isoform 2 ATRX 0.026 transcriptional regulator ATRX isoform 1 LOC283685 0.026 PREDICTED: golgi autoantigen, golgin subfamily a-li... NSBP1 0.025 nucleosomal binding protein 1 CCAR1 0.025 cell-cycle and apoptosis regulatory protein 1 UBTF 0.025 upstream binding transcription factor, RNA polymera... UBTF 0.025 upstream binding transcription factor, RNA polymera... UBTF 0.025 upstream binding transcription factor, RNA polymerase... CHD1 0.025 chromodomain helicase DNA binding protein 1 RPGR 0.025 retinitis pigmentosa GTPase regulator isoform C [Hom...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
