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Search of human proteins with 19923442
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923442 transmembrane emp24 protein transport domain
containing 5 [Homo sapiens]
(229 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923442 transmembrane emp24 protein transport domain contain... 457 e-129
gi|5803040 interleukin 1 receptor-like 1 ligand precursor [Homo ... 241 5e-64
gi|32996709 transmembrane emp24 protein transport domain contain... 104 7e-23
gi|6679189 transmembrane emp24 domain containing 3 [Homo sapiens] 101 5e-22
gi|5803149 coated vesicle membrane protein [Homo sapiens] 86 2e-17
gi|21389573 transmembrane emp24 protein transport domain contain... 59 5e-09
gi|39725636 transmembrane emp24 protein transport domain contain... 47 2e-05
gi|33457308 transmembrane emp24 protein transport domain contain... 45 5e-05
gi|239753730 PREDICTED: hypothetical protein [Homo sapiens] 31 0.77
gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapi... 31 0.77
gi|239748243 PREDICTED: hypothetical protein XP_002346620 [Homo ... 30 2.2
gi|239742144 PREDICTED: hypothetical protein XP_002342414 [Homo ... 30 2.2
gi|27923592 SEC14-like 3 [Homo sapiens] 30 2.2
gi|226437579 NAC alpha domain containing [Homo sapiens] 29 2.9
gi|239753333 PREDICTED: actin, beta-like 3 [Homo sapiens] 29 2.9
gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens] 29 2.9
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 29 2.9
gi|239741786 PREDICTED: kappa-actin [Homo sapiens] 29 2.9
gi|50658082 centrosomal protein 70 kDa [Homo sapiens] 29 2.9
gi|4758528 hepatocyte growth factor-regulated tyrosine kinase su... 29 3.8
gi|19923979 ADP-ribosylation factor-like 11 [Homo sapiens] 29 3.8
gi|134133226 protein expressed in prostate, ovary, testis, and p... 29 3.8
gi|239741769 PREDICTED: similar to protein expressed in prostate... 29 3.8
gi|88953571 PREDICTED: similar to protein expressed in prostate,... 29 3.8
gi|119395754 keratin 5 [Homo sapiens] 28 5.0
gi|4759198 homer 1 [Homo sapiens] 28 6.5
gi|212549536 regulator of G-protein signaling like 1 [Homo sapiens] 28 6.5
gi|157389009 hypothetical protein LOC144608 [Homo sapiens] 28 6.5
gi|153791352 prostate, ovary, testis expressed protein on chromo... 28 8.5
gi|219521893 coiled-coil transcriptional coactivator isoform 2 [... 28 8.5
>gi|19923442 transmembrane emp24 protein transport domain containing
5 [Homo sapiens]
Length = 229
Score = 457 bits (1176), Expect = e-129
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MGDKIWLPFPVLLLAALPPVLLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEI 60
MGDKIWLPFPVLLLAALPPVLLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEI
Sbjct: 1 MGDKIWLPFPVLLLAALPPVLLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEI 60
Query: 61 EYQVLDGAGLDIDFHLASPEGKTLVFEQRKSDGVHTVETEVGDYMFCFDNTFSTISEKVI 120
EYQVLDGAGLDIDFHLASPEGKTLVFEQRKSDGVHTVETEVGDYMFCFDNTFSTISEKVI
Sbjct: 61 EYQVLDGAGLDIDFHLASPEGKTLVFEQRKSDGVHTVETEVGDYMFCFDNTFSTISEKVI 120
Query: 121 FFELILDNMGEQAQEQEDWKKYITGTDILDMKLEDILESINSIKSRLSKSGHIQILLRAF 180
FFELILDNMGEQAQEQEDWKKYITGTDILDMKLEDILESINSIKSRLSKSGHIQILLRAF
Sbjct: 121 FFELILDNMGEQAQEQEDWKKYITGTDILDMKLEDILESINSIKSRLSKSGHIQILLRAF 180
Query: 181 EARDRNIQESNFDRVNFWSMVNLVVMVVVSAIQVYMLKSLFEDKRKSRT 229
EARDRNIQESNFDRVNFWSMVNLVVMVVVSAIQVYMLKSLFEDKRKSRT
Sbjct: 181 EARDRNIQESNFDRVNFWSMVNLVVMVVVSAIQVYMLKSLFEDKRKSRT 229
>gi|5803040 interleukin 1 receptor-like 1 ligand precursor [Homo
sapiens]
Length = 227
Score = 241 bits (614), Expect = 5e-64
Identities = 121/210 (57%), Positives = 158/210 (75%), Gaps = 3/210 (1%)
Query: 17 LPPVLLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGLDIDFHL 76
+PPV + G AG P D +FTF LPAG+K+CFYQ P ASLE EYQV+ GAGLD+DF L
Sbjct: 16 MPPVEV-GGAGPPPIQDGEFTFLLPAGRKQCFYQSAPANASLETEYQVIGGAGLDVDFTL 74
Query: 77 ASPEGKTLVFEQRKSDGVHTVE-TEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQE 135
SP+G LV E RK+DGVHTVE TE GDY CFDN+FSTISEK++FFELI D++ + +E
Sbjct: 75 ESPQGVLLVSESRKADGVHTVEPTEAGDYKLCFDNSFSTISEKLVFFELIFDSL-QDDEE 133
Query: 136 QEDWKKYITGTDILDMKLEDILESINSIKSRLSKSGHIQILLRAFEARDRNIQESNFDRV 195
E W + + ++LD+K+EDI ESI ++++RL +S + LLRAFEARDRN+QE N +RV
Sbjct: 134 VEGWAEAVEPEEMLDVKMEDIKESIETMRTRLERSIQMLTLLRAFEARDRNLQEGNLERV 193
Query: 196 NFWSMVNLVVMVVVSAIQVYMLKSLFEDKR 225
NFWS VN+ V+++V+ +QV LK F+DKR
Sbjct: 194 NFWSAVNVAVLLLVAVLQVCTLKRFFQDKR 223
>gi|32996709 transmembrane emp24 protein transport domain containing
7 [Homo sapiens]
Length = 224
Score = 104 bits (259), Expect = 7e-23
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 23/220 (10%)
Query: 13 LLAALPPVLLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGLDI 72
LLA L +L+PG G S+ TF LP K+CFY+ + +E+QV+ G D+
Sbjct: 21 LLALL--LLVPGPGGA-----SEITFELPDNAKQCFYEDIAQGTKCTLEFQVITGGHYDV 73
Query: 73 DFHLASPEGKTLVFEQRKS-DGVHTVETEVGDYMFCFDNTFSTISEKVIFFELILDNMGE 131
D L P+GK L E +K D ++ G Y FCF N FST + K ++F+ +GE
Sbjct: 74 DCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHKTVYFDF---QVGE 130
Query: 132 QAQ--EQEDWKKYITGTDILDMKLEDILESINSIKSRLSKSGHIQILLRAFEARDRNIQE 189
E+ +T + + + + L+S+ ++ R EA+ R+ E
Sbjct: 131 DPPLFPSENRVSALTQMESACVSIHEALKSVIDYQTH----------FRLREAQGRSRAE 180
Query: 190 SNFDRVNFWSMVNLVVMVVVSAIQVYMLKSLFEDKRKSRT 229
RV +WS+ ++++VVS QV++LKS F DKR + T
Sbjct: 181 DLNTRVAYWSVGEALILLVVSIGQVFLLKSFFSDKRTTTT 220
>gi|6679189 transmembrane emp24 domain containing 3 [Homo sapiens]
Length = 217
Score = 101 bits (252), Expect = 5e-22
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 34 SDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGLDIDFHLASPEGKTLVFEQRKSDG 93
++ TF LP K+CF++ + ++YQV+ G D+D ++ P+G T+ E +K
Sbjct: 27 AELTFELPDNAKQCFHEEVEQGVKFSLDYQVITGGHYDVDCYVEDPQGNTIYRETKKQYD 86
Query: 94 VHTVETEV-GDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDWKKYITGTDILDMK 152
T EV G Y FCF N FST S K ++F+ +G++ D +T ++
Sbjct: 87 SFTYRAEVKGVYQFCFSNEFSTFSHKTVYFDF---QVGDEPPILPDMGNRVTALTQMESA 143
Query: 153 LEDILESINSIKSRLSKSGHIQILLRAFEARDRNIQESNFDRVNFWSMVNLVVMVVVSAI 212
I E++ ++ Q R EA+DR E RV++WS+ + + VVS
Sbjct: 144 CVTIHEALKTVIDS-------QTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFS 196
Query: 213 QVYMLKSLFEDKR 225
QV +LKS F +KR
Sbjct: 197 QVLLLKSFFTEKR 209
>gi|5803149 coated vesicle membrane protein [Homo sapiens]
Length = 201
Score = 86.3 bits (212), Expect = 2e-17
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 14 LAALPPVLLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGLDID 73
L L LL +G+ S+D A +ECF++ + + + ++V +G LDID
Sbjct: 7 LLVLLAALLATVSGYFVSID--------AHAEECFFERVTSGTKMGLIFEVAEGGFLDID 58
Query: 74 FHLASPEGKTLVFEQRKSDGVHTVETEV-GDYMFCFDNTFSTISEKVIFFELILDNMGEQ 132
+ P+ K + R+S G +T + G Y FCF N ST++ K++ F + ++GE
Sbjct: 59 VEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTI---DIGEA 115
Query: 133 AQEQEDWKKYITGTDILDMKLEDILESINSIKSRLSKSGHIQILLRAFEARDRNIQESNF 192
+ Q+ T+ KLE E IN + ++ H Q + E R I ++
Sbjct: 116 PKGQD------METEAHQNKLE---EMINELAVAMTAVKHEQEYMEVRERIHRAINDNTN 166
Query: 193 DRVNFWSMVNLVVMVVVSAIQVYMLKSLFEDKR 225
RV WS +V+V ++ Q+Y LK FE +R
Sbjct: 167 SRVVLWSFFEALVLVAMTLGQIYYLKRFFEVRR 199
>gi|21389573 transmembrane emp24 protein transport domain containing
6 [Homo sapiens]
Length = 240
Score = 58.5 bits (140), Expect = 5e-09
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 10/191 (5%)
Query: 35 DFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGLDIDFHLAS----PEGKTLVFEQRK 90
DF +P G ECF+Q +V G+ D H+A+ P+G + Q
Sbjct: 43 DFAIMIPPGGTECFWQFAHQTGYFYFSCEVQRTVGMSHDRHVAATAHNPQGFLIDTSQGV 102
Query: 91 SDGVHTVETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDWKKYITGTDILD 150
++ E G Y C N + ++ + G + ++ +K + T
Sbjct: 103 RGQINFSTQETGFYQLCLSNQHNHFGSVQVYLNFGVFYEGPETDHKQKERKQLNDT---- 158
Query: 151 MKLEDILESINSIKSRLSKSGHIQILLRAFEARDRNIQESNFDRVNFWSMVNLVVMVVVS 210
L+ I + +++ + R + D + +SN++ VN+WS +V+++
Sbjct: 159 --LDAIEDGTQKVQNNIFHMWRYYNFARMRKMADFFLIQSNYNYVNWWSTAQSLVIILSG 216
Query: 211 AIQVYMLKSLF 221
+Q+Y LK LF
Sbjct: 217 ILQLYFLKRLF 227
>gi|39725636 transmembrane emp24 protein transport domain containing
9 [Homo sapiens]
Length = 235
Score = 46.6 bits (109), Expect = 2e-05
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 30/206 (14%)
Query: 38 FTLPAGQKECFYQPMPLKASLEIEY--QVLDGA---------GLDIDFHLASPEGKTLVF 86
F + +K+CF + +P + + Y Q+ D GL + + PE K ++
Sbjct: 40 FHIGETEKKCFIEEIPDETMVIGNYRTQLYDKQREEYQPATPGLGMFVEVKDPEDKVILA 99
Query: 87 EQRKSDGVHTVETEV-GDYMFCFDNT---FSTISEKVIFFELILDNMGEQAQEQEDWKKY 142
Q S+G T + G++ C + FS + ++ L + +GE A + +
Sbjct: 100 RQYGSEGRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDIQ-VGEHANDYAE---- 154
Query: 143 ITGTDILD---MKLEDILESINSIKSRLSKSGHIQILLRAFEARDRNIQESNFDRVNFWS 199
I D L +++ ++E + I+ Q R E R R ES RV +WS
Sbjct: 155 IAAKDKLSELQLRVRQLVEQVEQIQKE-------QNYQRWREERFRQTSESTNQRVLWWS 207
Query: 200 MVNLVVMVVVSAIQVYMLKSLFEDKR 225
++ +++V + Q+ LKS FE K+
Sbjct: 208 ILQTLILVAIGVWQMRHLKSFFEAKK 233
>gi|33457308 transmembrane emp24 protein transport domain containing
4 [Homo sapiens]
Length = 227
Score = 45.1 bits (105), Expect = 5e-05
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 30/206 (14%)
Query: 38 FTLPAGQKECFYQPMPLKASLEIEYQVL-----------DGAGLDIDFHLASPEGKTLVF 86
F + +K CF + +P + + Y+ GL + + P+GK ++
Sbjct: 32 FHIGETEKRCFIEEIPDETMVIGNYRTQMWDKQKEVFLPSTPGLGMHVEVKDPDGKVVLS 91
Query: 87 EQRKSDGVHTVETEV-GDYMFCFDNTFSTISEKVIFF-----ELILD-NMGEQAQEQEDW 139
Q S+G T + GD+ C + S ++ F + LD +GE A +
Sbjct: 92 RQYGSEGRFTFTSHTPGDHQICLHSN----STRMALFAGGKLRVHLDIQVGEHANNYPEI 147
Query: 140 KKYITGTDILDMKLEDILESINSIKSRLSKSGHIQILLRAFEARDRNIQESNFDRVNFWS 199
T+ L ++ +L+ + I+ Q R E R R ES RV +WS
Sbjct: 148 AAKDKLTE-LQLRARQLLDQVEQIQKE-------QDYQRYREERFRLTSESTNQRVLWWS 199
Query: 200 MVNLVVMVVVSAIQVYMLKSLFEDKR 225
+ V++++ Q+ LKS FE K+
Sbjct: 200 IAQTVILILTGIWQMRHLKSFFEAKK 225
>gi|239753730 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 31.2 bits (69), Expect = 0.77
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 83 TLVFEQRKSDGVHTVETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDWKKY 142
TL E ++ G + ETE+ + + D F + + I DN ++ + D K
Sbjct: 2 TLPNELNEAPGTNPAETEICNIL---DREFKIAVLRKL--NEIQDNTEKELKVLSD--KI 54
Query: 143 ITGTDILDMKLEDILESINSIKSRLSKSGHIQILLRAFEARDRNIQESNFDRV 195
I +I+ M +ILE N+ R + SG + L E R + +S FD +
Sbjct: 55 IKEIEIIKMNQAEILELKNATDIRKNASGSLNKRLNLSEERISELGDSLFDNI 107
>gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapiens]
Length = 1478
Score = 31.2 bits (69), Expect = 0.77
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 102 GDYMFCFDNTFSTISEKVIFFELILD 127
G YM FDNTFS K +F+ L +D
Sbjct: 1442 GIYMLIFDNTFSRFVSKKVFYHLTVD 1467
>gi|239748243 PREDICTED: hypothetical protein XP_002346620 [Homo
sapiens]
Length = 113
Score = 29.6 bits (65), Expect = 2.2
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 87 EQRKSDGVHTVETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDWKKYITGT 146
E ++ G + ETE+ + + D F + + I DN ++ + D K I
Sbjct: 6 ELNEAPGTNPAETEICNIL---DREFKIAVLRKL--NEIQDNTEKELKVLSD--KIIKEI 58
Query: 147 DILDMKLEDILESINSIKSRLSKSGHIQILLRAFEARDRNIQESNFDRV 195
+I+ M +ILE N+ R + SG + L E R + +S FD +
Sbjct: 59 EIIKMNQAEILELKNATDIRKNASGSLNKRLNLSEERISELGDSLFDNI 107
>gi|239742144 PREDICTED: hypothetical protein XP_002342414 [Homo
sapiens]
Length = 113
Score = 29.6 bits (65), Expect = 2.2
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 87 EQRKSDGVHTVETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDWKKYITGT 146
E ++ G + ETE+ + + D F + + I DN ++ + D K I
Sbjct: 6 ELNEAPGTNPAETEICNIL---DREFKIAVLRKL--NEIQDNTEKELKVLSD--KIIKEI 58
Query: 147 DILDMKLEDILESINSIKSRLSKSGHIQILLRAFEARDRNIQESNFDRV 195
+I+ M +ILE N+ R + SG + L E R + +S FD +
Sbjct: 59 EIIKMNQAEILELKNATDIRKNASGSLNKRLNLSEERISELGDSLFDNI 107
>gi|27923592 SEC14-like 3 [Homo sapiens]
Length = 400
Score = 29.6 bits (65), Expect = 2.2
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 99 TEVGDYMFCFDNTFSTISEKVIFF--ELILDNMGEQAQEQE 137
+E G Y+ FDNT+S + K + F E++L + G Q ++E
Sbjct: 356 SEAGVYVLRFDNTYSFVHAKKVSFTVEVLLPDEGMQKYDKE 396
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 29.3 bits (64), Expect = 2.9
Identities = 19/66 (28%), Positives = 27/66 (40%)
Query: 14 LAALPPVLLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGLDID 73
+AA PV G T DS T LP + P P+ A+ + Q +G L D
Sbjct: 860 VAAATPVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQD 919
Query: 74 FHLASP 79
+ +P
Sbjct: 920 SAMTAP 925
>gi|239753333 PREDICTED: actin, beta-like 3 [Homo sapiens]
Length = 924
Score = 29.3 bits (64), Expect = 2.9
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 113 STISEKVIFFELILDNMGEQAQEQEDWKKYITGTDILDMKLEDILESI 160
ST+ E+V L LD M Q+Q +E KKY+ + ++ K +++L+++
Sbjct: 498 STLQEEVAMLRLELDIMKHQSQLRE--KKYLEEIESVEKKNDNLLKAL 543
>gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens]
Length = 924
Score = 29.3 bits (64), Expect = 2.9
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 113 STISEKVIFFELILDNMGEQAQEQEDWKKYITGTDILDMKLEDILESI 160
ST+ E+V L LD M Q+Q +E KKY+ + ++ K +++L+++
Sbjct: 498 STLQEEVAMLRLELDIMKHQSQLRE--KKYLEEIESVEKKNDNLLKAL 543
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 29.3 bits (64), Expect = 2.9
Identities = 19/66 (28%), Positives = 27/66 (40%)
Query: 14 LAALPPVLLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGLDID 73
+AA PV G T DS T LP + P P+ A+ + Q +G L D
Sbjct: 860 VAAATPVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQD 919
Query: 74 FHLASP 79
+ +P
Sbjct: 920 SAMTAP 925
>gi|239741786 PREDICTED: kappa-actin [Homo sapiens]
Length = 924
Score = 29.3 bits (64), Expect = 2.9
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 113 STISEKVIFFELILDNMGEQAQEQEDWKKYITGTDILDMKLEDILESI 160
ST+ E+V L LD M Q+Q +E KKY+ + ++ K +++L+++
Sbjct: 498 STLQEEVAMLRLELDIMKHQSQLRE--KKYLEEIESVEKKNDNLLKAL 543
>gi|50658082 centrosomal protein 70 kDa [Homo sapiens]
Length = 597
Score = 29.3 bits (64), Expect = 2.9
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 115 ISEKVIFFELILDNMGEQAQEQEDWKKYITGTDILDMKLEDILESINSIKSRLSKSGHIQ 174
+ + V ELI E +++++ KY ++D + +L SINSI +
Sbjct: 310 LKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSI----IHNPRAP 365
Query: 175 ILLRAFEARDRNIQESNFDRVNFWSMVNLVVMVVVSAIQVYMLKSLFE 222
+++ ++ +Q N D V +LV ++ + A Q+ LK L++
Sbjct: 366 VII--YKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYK 411
>gi|4758528 hepatocyte growth factor-regulated tyrosine kinase
substrate [Homo sapiens]
Length = 777
Score = 28.9 bits (63), Expect = 3.8
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 122 FELILDNMGEQAQEQEDWKKYITGTDILDMKLEDILESINSIKSRLS-KSGHIQI-LLRA 179
FE +LD Q + DW+ + D++ ++NSIK +++ K+ H+ + L
Sbjct: 8 FERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEV 67
Query: 180 FEARDRNIQESNFDRV 195
E+ +N ++ D V
Sbjct: 68 MESVVKNCGQTVHDEV 83
>gi|19923979 ADP-ribosylation factor-like 11 [Homo sapiens]
Length = 196
Score = 28.9 bits (63), Expect = 3.8
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 124 LILDNMGEQAQEQEDWKKYITGTDILDMKLEDILES 159
L L ++G QA + WK Y+ GTDIL L+ E+
Sbjct: 59 LTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEA 94
>gi|134133226 protein expressed in prostate, ovary, testis, and
placenta 2 [Homo sapiens]
Length = 1075
Score = 28.9 bits (63), Expect = 3.8
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 113 STISEKVIFFELILDNMGEQAQEQEDWKKYITGTDILDMKLEDILESI 160
ST+ E++ L LD M Q+Q +E KKY+ + + K +++L+++
Sbjct: 649 STLREEIAMLRLELDTMKHQSQLRE--KKYLEDIESVKKKNDNLLKAL 694
>gi|239741769 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 [Homo sapiens]
Length = 952
Score = 28.9 bits (63), Expect = 3.8
Identities = 20/82 (24%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 84 LVFEQRKSDGVHTVETEVG-----DYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQED 138
L+ E+++ + V + +E+ + F +N ST+ E++ L LD M Q+Q ++
Sbjct: 494 LIHEEKQIEVVEKMNSELSLSCKKEKDFLHEN--STLREEIAMLRLELDTMKHQSQLRK- 550
Query: 139 WKKYITGTDILDMKLEDILESI 160
KKY+ + + K +++L+++
Sbjct: 551 -KKYLEDIESVKKKNDNLLKAL 571
>gi|88953571 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 isoform 2 [Homo sapiens]
Length = 1075
Score = 28.9 bits (63), Expect = 3.8
Identities = 20/82 (24%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 84 LVFEQRKSDGVHTVETEVG-----DYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQED 138
L+ E+++ + V + +E+ + F +N ST+ E++ L LD M Q+Q ++
Sbjct: 617 LIHEEKQIEVVEKMNSELSLSCKKEKDFLHEN--STLREEIAMLRLELDTMKHQSQLRK- 673
Query: 139 WKKYITGTDILDMKLEDILESI 160
KKY+ + + K +++L+++
Sbjct: 674 -KKYLEDIESVKKKNDNLLKAL 694
>gi|119395754 keratin 5 [Homo sapiens]
Length = 590
Score = 28.5 bits (62), Expect = 5.0
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 17/140 (12%)
Query: 94 VHTVETEVGDYMFCFDNTFSTISEKVIFFE---LILDNMGEQAQEQEDWKKYITGTDILD 150
+ V TE + + +N F++ +KV F E +LD QEQ GT +
Sbjct: 161 IQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVLDTKWTLLQEQ--------GTKTVR 212
Query: 151 MKLEDILES-INSIKSRL----SKSGHIQILLRAFEARDRNIQESNFDRVNFWSMV-NLV 204
LE + E IN+++ +L + G + LR + + + D +N + N
Sbjct: 213 QNLEPLFEQYINNLRRQLDSIVGERGRLDSELRNMQDLVEDFKNKYEDEINKRTTAENEF 272
Query: 205 VMVVVSAIQVYMLKSLFEDK 224
VM+ YM K E K
Sbjct: 273 VMLKKDVDAAYMNKVELEAK 292
>gi|4759198 homer 1 [Homo sapiens]
Length = 354
Score = 28.1 bits (61), Expect = 6.5
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 90 KSDGVHTVETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDWKKYITGTDIL 149
+++ VHT +TE+ + + T E++ + +DN E ++++ + + +I
Sbjct: 238 QANAVHTHKTELNQTIQELEETLKLKEEEIERLKQEIDNARELQEQRDSLTQKLQEVEIR 297
Query: 150 DMKLEDILESINSIKSRLSKSGHIQILLR 178
+ LE ++ ++ RL KS + Q R
Sbjct: 298 NKDLEG---QLSDLEQRLEKSQNEQEAFR 323
>gi|212549536 regulator of G-protein signaling like 1 [Homo sapiens]
Length = 1076
Score = 28.1 bits (61), Expect = 6.5
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 43 GQKECFYQPMPLKASLEIEYQVLDGAGLDIDFHLASPEGKTLVFEQRKSDGVHTVETEVG 102
G++E ++ SLE+ + D +D + + + E K G +++ E+
Sbjct: 515 GKEENILLYKRIQQSLELSQALADMKEMDYR------QWRKIATEDLKQGG--SLQVELT 566
Query: 103 DYMFCFDNTFSTISEKVIFFELILDNMGEQAQE-QEDWKKYITGTDILDMKLEDILESIN 161
+F D T K+ F EL N Q+ +D+K Y +D K+E I E+
Sbjct: 567 SPVFLTDIT------KMSFEELCYKNPKMAIQKISDDYKIYCEKAPKIDFKMEIIKETKT 620
Query: 162 SIKSRLSKSGHIQILLRAFEARDRNIQE 189
+S S + L+R R RN+ E
Sbjct: 621 VSRSNRKMSLLKRTLVRKPSMRPRNLTE 648
>gi|157389009 hypothetical protein LOC144608 [Homo sapiens]
Length = 245
Score = 28.1 bits (61), Expect = 6.5
Identities = 18/97 (18%), Positives = 44/97 (45%), Gaps = 16/97 (16%)
Query: 133 AQEQEDWKKYITGTDILDMKLEDILESINSIKSRLSKSGHIQILLRAFEARD-------- 184
++ ++D ++ I + ++D+ IN++ S+S + QILL A +
Sbjct: 3 SESEKDKERLIQAAKMFFFHVQDLASVINTLTELFSRSMNTQILLMAVKNNSYIKDFFEQ 62
Query: 185 --------RNIQESNFDRVNFWSMVNLVVMVVVSAIQ 213
+++ ++ D++ S+ + V M + S +Q
Sbjct: 63 MLKIFKEMQSVVDARHDKIQKESLCSKVAMAMCSVVQ 99
>gi|153791352 prostate, ovary, testis expressed protein on
chromosome 2 [Homo sapiens]
Length = 1075
Score = 27.7 bits (60), Expect = 8.5
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 113 STISEKVIFFELILDNMGEQAQEQEDWKKYITGTDILDMKLEDILESI 160
ST+ E++ L LD M Q+Q +E KKY+ + + + +++L+++
Sbjct: 649 STLREEIAMLRLELDTMKHQSQLRE--KKYLEDIESVKKRNDNLLKAL 694
>gi|219521893 coiled-coil transcriptional coactivator isoform 2
[Homo sapiens]
Length = 606
Score = 27.7 bits (60), Expect = 8.5
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 52 MPLKASLEIEYQVLDGAGLDIDFHLASPEGK-TLVFEQRK----SDGVHTVETEV----- 101
M LK LE + L +++ LA+ + T + EQ K S G T E ++
Sbjct: 131 MQLKLQLEGQVTELRSRVQELERALATARQEHTELMEQYKGISRSHGEITEERDILSRQQ 190
Query: 102 GDYM---FCFDNTFSTISEKVIFFELILDNMGEQ----AQEQE----DWKKYITGTDILD 150
GD++ ++ TISEKV+ E+ LD + + +EQE K+ + +
Sbjct: 191 GDHVARILELEDDIQTISEKVLTKEVELDRLRDTVKALTREQEKLLGQLKEVQADKEQSE 250
Query: 151 MKLEDILESINSIKSRLSKSGHIQILL-----RAFEARDRNIQESNFDRV 195
+LE + E + + + S LL A ARDR I E + R+
Sbjct: 251 AELEPLKEQLRGAQELAASSQQKATLLGEELASAAAARDRTIAELHRSRL 300
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,312,191
Number of Sequences: 37866
Number of extensions: 376617
Number of successful extensions: 944
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 909
Number of HSP's gapped (non-prelim): 42
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.