Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SEC14L3 Sequence: fasta or formatted (400aa) NCBI GI: 27923592
Description:

SEC14-like 3

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         12           1
 C cysteine            2.0          8           1
 D aspartate           6.8         27           2
 E glutamate           7.5         30           2
 F phenylalanine       5.0         20           2
 G glycine             7.5         30           2
 H histidine           1.8          7           1
 I isoleucine          4.5         18           2
 K lysine              7.8         31           2
 L leucine            11.5         46           2
 M methionine          3.2         13           1
 N asparagine          3.2         13           2
 P proline             6.0         24           2
 Q glutamine           4.2         17           1
 R arginine            5.0         20           2
 S serine              4.0         16           2
 T threonine           4.8         19           1
 V valine              6.8         27           1
 W tryptophan          1.5          6           1
 Y tyrosine            4.0         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SEC14-like 3 
SEC14L2               0.798   SEC14-like 2 isoform 1 
SEC14L2               0.729   SEC14-like 2 isoform 2 
SEC14L4               0.727   SEC14p-like protein TAP3 isoform a 
LOC730005             0.691   PREDICTED: similar to SEC14p-like protein TAP3 [Hom...
LOC730005             0.689   PREDICTED: similar to SEC14p-like protein TAP3 [Hom...
LOC730005             0.689   PREDICTED: similar to SEC14p-like protein TAP3 [Hom...
SEC14L4               0.667   SEC14p-like protein TAP3 isoform b 
SEC14L1               0.193   SEC14 (S. cerevisiae)-like 1 isoform c 
SEC14L1               0.193   SEC14 (S. cerevisiae)-like 1 isoform a 
SEC14L1               0.193   SEC14 (S. cerevisiae)-like 1 isoform a 
SEC14L1               0.193   SEC14 (S. cerevisiae)-like 1 isoform b 
SEC14L1               0.193   SEC14 (S. cerevisiae)-like 1 isoform a 
SEC14L5               0.193   SEC14-like 5 
TTPA                  0.078   tocopherol (alpha) transfer protein 
RLBP1L2               0.062   retinaldehyde binding protein 1-like 2 
RLBP1L1               0.059   retinaldehyde binding protein 1-like 1 
RLBP1                 0.047   retinaldehyde binding protein 1 
TTPAL                 0.046   tocopherol (alpha) transfer protein-like 
TTPAL                 0.046   tocopherol (alpha) transfer protein-like 
FYCO1                 0.029   FYVE and coiled-coil domain containing 1 
ACBD3                 0.027   acyl-Coenzyme A binding domain containing 3 
PTPN9                 0.017   protein tyrosine phosphatase, non-receptor type 9 [Ho...
TMED8                 0.017   transmembrane emp24 protein transport domain contain...
LOC553158             0.010   PRR5-ARHGAP8 fusion protein 
ARHGAP8               0.010   Rho GTPase activating protein 8 isoform 2 
TRIP11                0.006   thyroid hormone receptor interactor 11 
TMED5                 0.006   transmembrane emp24 protein transport domain contain...
ZNF642                0.005   zinc finger protein 642 
MOSPD2                0.005   motile sperm domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press