Guide to the Human Genome
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Name: ARL11 Sequence: fasta or formatted (196aa) NCBI GI: 19923979
Description:

ADP-ribosylation factor-like 11

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         18           2
 C cysteine            2.0          4           1
 D aspartate           5.1         10           1
 E glutamate           7.1         14           1
 F phenylalanine       1.5          3           1
 G glycine             8.2         16           2
 H histidine           2.6          5           1
 I isoleucine          1.0          2           1
 K lysine              5.1         10           1
 L leucine            15.8         31           2
 M methionine          2.6          5           2
 N asparagine          3.1          6           1
 P proline             5.1         10           1
 Q glutamine           3.6          7           1
 R arginine            5.6         11           1
 S serine              7.7         15           1
 T threonine           4.6          9           2
 V valine              6.6         13           2
 W tryptophan          2.0          4           1
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor-like 11 
ARL14                 0.350   ADP-ribosylation factor-like 14 
ARL3                  0.321   ADP-ribosylation factor-like 3 
ARF6                  0.313   ADP-ribosylation factor 6 
ARL2                  0.305   ADP-ribosylation factor-like 2 
ARF5                  0.302   ADP-ribosylation factor 5 
ARL4C                 0.302   ADP-ribosylation factor-like 4C 
ARF3                  0.302   ADP-ribosylation factor 3 
ARF1                  0.296   ADP-ribosylation factor 1 
ARF1                  0.296   ADP-ribosylation factor 1 
ARF1                  0.296   ADP-ribosylation factor 1 
ARF1                  0.296   ADP-ribosylation factor 1 
ARL4D                 0.288   ADP-ribosylation factor-like 4D 
ARL5A                 0.286   ADP-ribosylation factor-like 5A isoform 1 
ARF4                  0.286   ADP-ribosylation factor 4 
ARL1                  0.272   ADP-ribosylation factor-like 1 
TRIM23                0.267   ADP-ribosylation factor domain protein 1 isoform alph...
ARL4A                 0.267   ADP-ribosylation factor-like 4A 
ARL4A                 0.267   ADP-ribosylation factor-like 4A 
ARL4A                 0.267   ADP-ribosylation factor-like 4A 
ARL5B                 0.267   ADP-ribosylation factor-like 8 
TRIM23                0.248   ADP-ribosylation factor domain protein 1 isoform bet...
ARL5C                 0.245   ADP-ribosylation factor-like 5C 
TRIM23                0.232   ADP-ribosylation factor domain protein 1 isoform gam...
ARL6                  0.221   ADP-ribosylation factor-like 6 
ARL6                  0.221   ADP-ribosylation factor-like 6 
ARL5A                 0.218   ADP-ribosylation factor-like 5A isoform 2 
ARL5A                 0.218   ADP-ribosylation factor-like 5A isoform 2 
ARL8A                 0.208   ADP-ribosylation factor-like 8A 
ARL8B                 0.208   ADP-ribosylation factor-like 10C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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