CCDC113 11661

Name: CCDC113	Sequence: fasta or formatted (377aa)		NCBI GI: 19923432
Description: coiled-coil domain containing 113 isoform 1		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [323aa] coiled-coil domain containing 113 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 28 2 C cysteine 0.3 1 1 D aspartate 5.3 20 2 E glutamate 12.7 48 2 F phenylalanine 1.6 6 1 G glycine 2.7 10 1 H histidine 2.1 8 2 I isoleucine 5.0 19 2 K lysine 10.9 41 3 L leucine 11.9 45 2 M methionine 3.4 13 1 N asparagine 3.7 14 1 P proline 1.3 5 2 Q glutamine 5.6 21 2 R arginine 8.2 31 3 S serine 5.8 22 2 T threonine 3.4 13 1 V valine 5.3 20 1 W tryptophan 0.8 3 1 Y tyrosine 2.4 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 113 isoform 1 CCDC113 0.782 coiled-coil domain containing 113 isoform 2 CCDC96 0.077 coiled-coil domain containing 96 CCDC88A 0.056 coiled-coil domain containing 88A isoform 2 CCDC88A 0.056 coiled-coil domain containing 88A isoform 1 GCC2 0.050 GRIP and coiled-coil domain-containing 2 CCDC147 0.047 coiled-coil domain containing 147 KIAA1009 0.040 KIAA1009 protein CCDC46 0.039 coiled-coil domain containing 46 isoform a FAM184A 0.039 hypothetical protein LOC79632 isoform 2 FAM184A 0.039 hypothetical protein LOC79632 isoform 1 EEA1 0.037 early endosome antigen 1, 162kD CROCC 0.037 ciliary rootlet coiled-coil KIF7 0.037 kinesin family member 7 LOC645202 0.036 PREDICTED: hypothetical protein LOC645202 LOC283685 0.036 PREDICTED: golgi autoantigen, golgin subfamily a-li... AKAP9 0.036 A-kinase anchor protein 9 isoform 2 AKAP9 0.036 A-kinase anchor protein 9 isoform 3 TAOK1 0.036 TAO kinase 1 LOC283767 0.036 golgi autoantigen, golgin subfamily a-like SYCP1 0.036 synaptonemal complex protein 1 CENPE 0.036 centromere protein E CENPF 0.034 centromere protein F SCLT1 0.034 sodium channel associated protein 1 CGNL1 0.034 cingulin-like 1 MYH9 0.034 myosin, heavy polypeptide 9, non-muscle CEP290 0.034 centrosomal protein 290kDa DSP 0.033 desmoplakin isoform I UACA 0.033 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.033 uveal autoantigen with coiled-coil domains and ankyr... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.