Search of human proteins with 19743894

Search of human proteins with 19743894

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19743894 transcriptional adaptor 3-like isoform b [Homo
sapiens]
         (369 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19743894 transcriptional adaptor 3-like isoform b [Homo sapiens]   746   0.0  
gi|5454104 transcriptional adaptor 3-like isoform a [Homo sapiens]    746   0.0  
gi|118498345 AT-binding transcription factor 1 [Homo sapiens]          37   0.022
gi|155969701 espin-like [Homo sapiens]                                 36   0.048
gi|5453682 hexamethylene bis-acetamide inducible 1 [Homo sapiens]      36   0.063
gi|91208420 bassoon protein [Homo sapiens]                             35   0.082
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ...    35   0.082
gi|31657117 SMEK homolog 1, suppressor of mek1 [Homo sapiens]          35   0.11 
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ...    35   0.14 
gi|4504063 golgin 97 [Homo sapiens]                                    35   0.14 
gi|24308223 hypothetical protein LOC57577 [Homo sapiens]               35   0.14 
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ...    34   0.18 
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo...    34   0.18 
gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens]              34   0.24 
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]                34   0.24 
gi|221139926 NHS-like 1 [Homo sapiens]                                 33   0.41 
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]    33   0.41 
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H...    33   0.41 
gi|115648142 centrosomal protein 164kDa [Homo sapiens]                 33   0.53 
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]                       33   0.53 
gi|157504499 ankyrin repeat domain 47 [Homo sapiens]                   32   0.70 
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     32   0.91 
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            32   0.91 
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            32   0.91 
gi|154091020 leucine-rich repeats and calponin homology (CH) dom...    32   0.91 
gi|65287717 eukaryotic translation initiation factor 2 alpha kin...    32   0.91 
gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens]     32   0.91 
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho...    32   0.91 
gi|5729790 CCCTC-binding factor [Homo sapiens]                         32   1.2  
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi...    32   1.2  

>gi|19743894 transcriptional adaptor 3-like isoform b [Homo sapiens]
          Length = 369

 Score =  746 bits (1927), Expect = 0.0
 Identities = 369/369 (100%), Positives = 369/369 (100%)

Query: 1   MSELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRR 60
           MSELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRR
Sbjct: 1   MSELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRR 60

Query: 61  LRVLEAETQILTDWQDKKGDRRFLKLGRDHELGAPPKHGKPKKQKLEGKAGHGPGPGPGR 120
           LRVLEAETQILTDWQDKKGDRRFLKLGRDHELGAPPKHGKPKKQKLEGKAGHGPGPGPGR
Sbjct: 61  LRVLEAETQILTDWQDKKGDRRFLKLGRDHELGAPPKHGKPKKQKLEGKAGHGPGPGPGR 120

Query: 121 PKSKNLQPKIQEYEFTDDPIDVPRIPKNDAPNRFWASVEPYCADITSEEVRTLEELLKPP 180
           PKSKNLQPKIQEYEFTDDPIDVPRIPKNDAPNRFWASVEPYCADITSEEVRTLEELLKPP
Sbjct: 121 PKSKNLQPKIQEYEFTDDPIDVPRIPKNDAPNRFWASVEPYCADITSEEVRTLEELLKPP 180

Query: 181 EDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAAVADKKKGLMGPLTELDTKDVDAL 240
           EDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAAVADKKKGLMGPLTELDTKDVDAL
Sbjct: 181 EDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAAVADKKKGLMGPLTELDTKDVDAL 240

Query: 241 LKKSEAQHEQPEDGCPFGALTQRLLQALVEENIISPMEDSPIPDMSGKESGADGASTSPR 300
           LKKSEAQHEQPEDGCPFGALTQRLLQALVEENIISPMEDSPIPDMSGKESGADGASTSPR
Sbjct: 241 LKKSEAQHEQPEDGCPFGALTQRLLQALVEENIISPMEDSPIPDMSGKESGADGASTSPR 300

Query: 301 NQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSEDEVLAELRKRQAELKALSAHN 360
           NQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSEDEVLAELRKRQAELKALSAHN
Sbjct: 301 NQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSEDEVLAELRKRQAELKALSAHN 360

Query: 361 RTKKHDLLR 369
           RTKKHDLLR
Sbjct: 361 RTKKHDLLR 369


>gi|5454104 transcriptional adaptor 3-like isoform a [Homo sapiens]
          Length = 432

 Score =  746 bits (1927), Expect = 0.0
 Identities = 369/369 (100%), Positives = 369/369 (100%)

Query: 1   MSELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRR 60
           MSELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRR
Sbjct: 1   MSELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRR 60

Query: 61  LRVLEAETQILTDWQDKKGDRRFLKLGRDHELGAPPKHGKPKKQKLEGKAGHGPGPGPGR 120
           LRVLEAETQILTDWQDKKGDRRFLKLGRDHELGAPPKHGKPKKQKLEGKAGHGPGPGPGR
Sbjct: 61  LRVLEAETQILTDWQDKKGDRRFLKLGRDHELGAPPKHGKPKKQKLEGKAGHGPGPGPGR 120

Query: 121 PKSKNLQPKIQEYEFTDDPIDVPRIPKNDAPNRFWASVEPYCADITSEEVRTLEELLKPP 180
           PKSKNLQPKIQEYEFTDDPIDVPRIPKNDAPNRFWASVEPYCADITSEEVRTLEELLKPP
Sbjct: 121 PKSKNLQPKIQEYEFTDDPIDVPRIPKNDAPNRFWASVEPYCADITSEEVRTLEELLKPP 180

Query: 181 EDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAAVADKKKGLMGPLTELDTKDVDAL 240
           EDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAAVADKKKGLMGPLTELDTKDVDAL
Sbjct: 181 EDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAAVADKKKGLMGPLTELDTKDVDAL 240

Query: 241 LKKSEAQHEQPEDGCPFGALTQRLLQALVEENIISPMEDSPIPDMSGKESGADGASTSPR 300
           LKKSEAQHEQPEDGCPFGALTQRLLQALVEENIISPMEDSPIPDMSGKESGADGASTSPR
Sbjct: 241 LKKSEAQHEQPEDGCPFGALTQRLLQALVEENIISPMEDSPIPDMSGKESGADGASTSPR 300

Query: 301 NQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSEDEVLAELRKRQAELKALSAHN 360
           NQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSEDEVLAELRKRQAELKALSAHN
Sbjct: 301 NQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSEDEVLAELRKRQAELKALSAHN 360

Query: 361 RTKKHDLLR 369
           RTKKHDLLR
Sbjct: 361 RTKKHDLLR 369


>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
          Length = 3703

 Score = 37.4 bits (85), Expect = 0.022
 Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 7/122 (5%)

Query: 227 GPLTELDTKDVDALLKKSEAQHEQPEDGC-------PFGALTQRLLQALVEENIISPMED 279
           G  + +  +  +AL   S A  EQP+ G          G LT  +L+  +    + P+  
Sbjct: 366 GKFSGIRMEGEEALPAGSAAGPEQPQAGLLTPSTLLNLGGLTSSVLKTPITSVPLGPLAS 425

Query: 280 SPIPDMSGKESGADGASTSPRNQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSE 339
           SP     GK+SGA             FS     + E   +EE   +   E E+   E+ E
Sbjct: 426 SPTKSSEGKDSGAAEGEKQEVGDGDCFSEKVEPAEEEAEEEEEEEEAEEEEEEEEEEEEE 485

Query: 340 DE 341
           +E
Sbjct: 486 EE 487


>gi|155969701 espin-like [Homo sapiens]
          Length = 1005

 Score = 36.2 bits (82), Expect = 0.048
 Identities = 69/307 (22%), Positives = 115/307 (37%), Gaps = 56/307 (18%)

Query: 95  PPKHGKPKKQKLEGKAGHGPGPGPGRPKSKNLQPKIQEYEFTDDPIDVPRIPKNDAPNRF 154
           PP     ++   +G+ G   GPGPG P   +L P    +   D P+   ++  + AP R 
Sbjct: 343 PPPLLATRRSLEDGRRG---GPGPGNPSPMSLSPAWPGH--PDQPLPREQM-TSPAPPRI 396

Query: 155 WAS-------VEPYCADITSEEVRTLE---------ELLKPPEDE----AEHYKIPPLGK 194
             S        E   A  TS+ +  L+         + L P  DE       +K   + +
Sbjct: 397 ITSATADPEGTETALAGDTSDGLAALQLDGLPSGDIDGLVPTRDERGQPIPEWKRQVMVR 456

Query: 195 HYSQRWAQEDLLEEQKDGARAAAV-------ADKKKGLMGPLTELDTKDVDALLKKSEAQ 247
               R   E   E Q +G  +          +   + ++GP  EL T+D    L+K  A 
Sbjct: 457 KLQARLGAESSAEAQDNGGSSGPTEQAAWRYSQTHQAILGPFGELLTEDDLVYLEKQIAD 516

Query: 248 HEQPEDGCPFGALTQRL---LQALVEENIIS--------------PMEDSPIPDMSGKES 290
            +       + +   RL   LQAL+ E ++S               +E++ IP  +    
Sbjct: 517 LQLRRRCQEYESELGRLAAELQALLPEPLVSITVNSHFLPRAPGLEVEEASIP-AAEPAG 575

Query: 291 GADGASTSPRNQNKPFSVPHTKSLESRIKEEL-----IAQGLLESEDRPAEDSEDEVLAE 345
            A+ +  +P  Q  PF   H   L   +   L     + QG  +   RP +D+  E  A 
Sbjct: 576 SAEASEVAPGVQPLPFWCSHISRLVRSLSLLLKGVHGLVQGDEKPSTRPLQDTCREASAS 635

Query: 346 LRKRQAE 352
             + +A+
Sbjct: 636 PPRSEAQ 642


>gi|5453682 hexamethylene bis-acetamide inducible 1 [Homo sapiens]
          Length = 359

 Score = 35.8 bits (81), Expect = 0.063
 Identities = 43/192 (22%), Positives = 75/192 (39%), Gaps = 23/192 (11%)

Query: 180 PEDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAAVADKKKGLMGPLTELDTKDVDA 239
           P  +  H+K      +Y   W ++   +E K   RA+ +  +      P+   +T     
Sbjct: 157 PSKKKRHWK-----PYYKLTWEEKKKFDE-KQSLRASRIRAEMFAKGQPVAPYNTTQF-- 208

Query: 240 LLKKSEAQHEQPEDGCPFGALTQRLLQALVEENIISPMEDSPIPDMSGKESGADGASTSP 299
                   H+Q E     G  ++R      + +    ME+    D      G DG+    
Sbjct: 209 ----LMDDHDQEEPDLKTGLYSKRAAAKSDDTSDDDFMEEGGEEDGGSDGMGGDGSEFLQ 264

Query: 300 RNQNKPFSVPHTKSLESRIKEELIAQGL-LESEDRPAEDSEDEVL----------AELRK 348
           R+ ++ +   HT+SL++  K+ELI + L LE      ED  + +           A +R+
Sbjct: 265 RDFSETYERYHTESLQNMSKQELIKEYLELEKCLSRMEDENNRLRLESKRLGGDDARVRE 324

Query: 349 RQAELKALSAHN 360
            + EL  L A N
Sbjct: 325 LELELDRLRAEN 336


>gi|91208420 bassoon protein [Homo sapiens]
          Length = 3926

 Score = 35.4 bits (80), Expect = 0.082
 Identities = 61/267 (22%), Positives = 104/267 (38%), Gaps = 29/267 (10%)

Query: 108  GKAGHGPGPGPGRPKSKNLQPKIQEYEFTDDPIDVPRIPKNDAPNRFWASVEPYCADITS 167
            G  GH    G G   S + +P+++    T  P D  R    +  +   AS   Y +  + 
Sbjct: 940  GSYGHELDLGQGPDPSLDREPELEMESLTGSPEDRSR---GEHSSTLPASTPSYTSGTSP 996

Query: 168  EEVRTLEE----------LLKPPEDE--AEHYKIPPLGKHYSQRWAQEDLLEEQ---KDG 212
              + +LEE           L+  + +  A H    PL         +E+L EE+   ++ 
Sbjct: 997  TSLSSLEEDSDSSPSRRQRLEEAKQQRKARHRSHGPLLPTIEDSSEEEELREEEELLREQ 1056

Query: 213  ARAAAVADKKKGLMGPLTELDTKDVDALLKKSEAQHEQPEDGCPF--GALTQRLLQALVE 270
             +   V  ++       T  D +++ A  ++ E     P +  P    + T+ L QA   
Sbjct: 1057 EKMREVEQQRIRSTARKTRRDKEELRA-QRRRERSKTPPSNLSPIEDASPTEELRQAAEM 1115

Query: 271  ENI--ISPMEDSPIPDMSGKESGADGASTSPRNQNKPFSVPHTKSLESRIKEELIAQGLL 328
            E +   S  E SP P +  +    DG  +        +++P   SL S   E        
Sbjct: 1116 EELHRSSCSEYSPSPSLDSEAEALDGGPSRLYKSGSEYNLPTFMSLYSP-TETPSGSSTT 1174

Query: 329  ESEDRP---AEDSEDEVL--AELRKRQ 350
             S  RP   AE++ +E++  AEL +RQ
Sbjct: 1175 PSSGRPLKSAEEAYEEMMRKAELLQRQ 1201


>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
           homolog 2 [Homo sapiens]
          Length = 1210

 Score = 35.4 bits (80), Expect = 0.082
 Identities = 51/228 (22%), Positives = 89/228 (39%), Gaps = 42/228 (18%)

Query: 121 PKSKNLQPKIQEYEFTDDPIDVP---RIPKNDAPNRFWASVEPYCADITSEEVRTLEELL 177
           P+ K L    ++  F    + VP   ++ K   P++   SVE       S EV  +EE+L
Sbjct: 308 PELKPLPEDYRQQTFEKTDLKVPAKAKLTKLKMPSQ---SVE----QTYSNEVHCVEEIL 360

Query: 178 KPPEDEAEHYKIPPLGKHYSQRWAQEDLLE-EQKDGARAAAVADKKKGLMGPLTELDTKD 236
           K    E  H   PPL   ++   A+        KD    ++V   +K       + DT  
Sbjct: 361 K----EMTHSWPPPLTAIHTPSTAEPSKFPFPTKDSQHVSSVTQNQK-------QYDT-- 407

Query: 237 VDALLKKSEAQHEQPEDGCPFGALTQRLLQALVEENI-ISPMEDSPIPDMSGKESGADGA 295
                  S   H   + G            +++E+++ +S  EDS       K   +   
Sbjct: 408 -------SSKTHSNSQQGT----------SSMLEDDLQLSDSEDSDSEQTPEKPPSSSAP 450

Query: 296 STSPRNQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSEDEVL 343
            ++P++  +P +  H+ S ES    +  +    ESE   ++  E+E L
Sbjct: 451 PSAPQSLPEPVASAHSSSAESESTSDSDSSSDSESESSSSDSEENEPL 498


>gi|31657117 SMEK homolog 1, suppressor of mek1 [Homo sapiens]
          Length = 820

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 32/145 (22%), Positives = 63/145 (43%), Gaps = 25/145 (17%)

Query: 207 EEQKDGARAAAVADKKKG---LMGPLTEL-------DTKDVDALLKKSEAQHEQPEDGCP 256
           ++ +DG    + +DK K    +M P+++        ++++ + LLK + +  + P     
Sbjct: 675 DDMEDGEAVVSPSDKTKNDDDIMDPISKFMERKKLKESEEKEVLLKTNLSGRQSPS---- 730

Query: 257 FGALTQRLLQALVEENIISPMEDSPIPDMSGKESGADGASTSPRNQNKPFSVPHTKSLES 316
                +  L +  + N+ S    + +P       G+ G+  SP +   P SVP   S  +
Sbjct: 731 ----FKLSLSSGTKTNLTSQSSTTNLP-------GSPGSPGSPGSPGSPGSVPKNTSQTA 779

Query: 317 RIKEELIAQGLLESEDRPAEDSEDE 341
            I  +    GL++  D   +D EDE
Sbjct: 780 AITTKGGLVGLVDYPDDDEDDDEDE 804


>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
           [Homo sapiens]
          Length = 916

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 74/370 (20%), Positives = 144/370 (38%), Gaps = 74/370 (20%)

Query: 54  LSSASRRLRVLEAETQILTDWQDKKGDRRF-----LKLGRDHELGAPPKHGKPKKQKLEG 108
           LSS    ++ LE E +  T W+  +  R +     +K+  D E+ A  K  + ++ +   
Sbjct: 356 LSSYQDTIQQLENELRG-TKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFST 414

Query: 109 KAGHGPGP-----GPGRPKSKNLQPKIQ------EYEFTDDPIDVPRIP--KNDAPNRFW 155
            AG   GP      P    SK  +PK++      +++F ++ I+  ++   K++      
Sbjct: 415 FAGSITGPLYTHRPPITISSKIQKPKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALT 474

Query: 156 ASVEPYCADITSEEVRTLEELLKPPEDEAEHYKI---------PPLGKHYSQRWAQEDLL 206
           A  E     +  E+    EE  + PE E E             P + +   ++  +E   
Sbjct: 475 AITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQE 534

Query: 207 EEQKD------------GARAAAVADKKKGLM--------GPLTELDTKDVDALLKKSE- 245
           EE+++            G+     ++K++G              E + K+   + +KSE 
Sbjct: 535 EEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEE 594

Query: 246 ----------AQHEQPEDG---CPFGALTQR----LLQALVEENIISPMEDSPI------ 282
                     A+ E+PE      P   + ++    + ++ VEE   SP+  SP+      
Sbjct: 595 VATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKS 654

Query: 283 --PDMSGKESGADGASTSPRNQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSED 340
             P    +E G    S SP  +     VP +   E++ K E+      E E++  +++  
Sbjct: 655 PVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPK 714

Query: 341 EVLAELRKRQ 350
           E   E ++ +
Sbjct: 715 EEKVEKKEEK 724



 Score = 34.3 bits (77), Expect = 0.18
 Identities = 42/175 (24%), Positives = 64/175 (36%), Gaps = 37/175 (21%)

Query: 167 SEEVRTLEELLKPPEDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAAVADKKKGLM 226
           SEEV T EEL+   + E       P+ K          + E+ K     + V +K K  +
Sbjct: 592 SEEVATKEELVADAKVEKPEKAKSPVPK--------SPVEEKGKSPVPKSPVEEKGKSPV 643

Query: 227 GPLTELDTKDVDALLKKS-EAQHEQPEDGCPFGALTQRLLQALVEENIISPMEDSPIPDM 285
            P + ++ K    + K   E + + P    P            VEE   SP+  SP+ + 
Sbjct: 644 -PKSPVEEKGKSPVPKSPVEEKGKSPVSKSP------------VEEKAKSPVPKSPVEEA 690

Query: 286 SGKESGADGASTSP---------------RNQNKPFSVPHTKSLESRIKEELIAQ 325
             K     G                    + + KP  VP  K  ES +KEE +A+
Sbjct: 691 KSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAE 745


>gi|4504063 golgin 97 [Homo sapiens]
          Length = 767

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 27/209 (12%)

Query: 166 TSEEVRTLEELLKPPEDEAE-HYKIPPLGKHYSQRWAQEDLLEEQKDGA--RAAAVADKK 222
           T E  RT EEL+   +  ++   K+  L +HYS    Q D +   K GA  +  A+  K+
Sbjct: 206 TRELSRTQEELMNSNQMSSDLSQKLEELQRHYSTLEEQRDHVIASKTGAESKITALEQKE 265

Query: 223 KGLMGPLTELDTKDVDALLKKSEAQHEQPEDGC-----PFGALTQRLLQALV-EENIISP 276
           + L   + +L        L+K  A+ ++ ED          +L +RL Q L  EE++   
Sbjct: 266 QELQALIQQLSID-----LQKVTAETQEKEDVITHLQEKVASLEKRLEQNLSGEEHVQEL 320

Query: 277 MEDSPIPDMSGKESGADGASTSPRNQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAE 336
           +++  + + +  E        +  +Q K  +     +LE+R++E    +  L++ +   +
Sbjct: 321 LKEKTLAEQN-LEDTRQQLLAARSSQAKAIN-----TLETRVRE---LEQTLQASEEQLQ 371

Query: 337 DSEDEVLAELRKRQAELKALSAHNRTKKH 365
            S+  V A+    + +++ L+A N+   H
Sbjct: 372 QSKGIVAAQ----ETQIQELAAANQESSH 396


>gi|24308223 hypothetical protein LOC57577 [Homo sapiens]
          Length = 936

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 69/303 (22%), Positives = 108/303 (35%), Gaps = 63/303 (20%)

Query: 91  ELGAPPKHGKPKKQKLEGKAGHGPGPGPGRPKSKNLQPKIQEYEFTDDPIDVPRIPKNDA 150
           E   PP   KP      G +G    P  GR  + NLQ  +Q    +         P N  
Sbjct: 472 ETAVPPLWEKPPL----GSSGCMLSPPLGRTTTGNLQGSLQNVSLS--------APGNKQ 519

Query: 151 PNRFWASVEPYCADITSEEVRTLEELLKPPEDEAEHYKIPPLGKHYSQRWAQEDLLEEQK 210
                A  EP     ++E +RT  +  +P            LG  +++   Q+ L+E+QK
Sbjct: 520 HKTLGA--EPSQQPGSNETLRTTSQKAEPL----------CLGHFHNRHVFQQQLIEKQK 567

Query: 211 DGARAA--AVADKKKGLMGPLTELDTKDVDALLKKSEAQH--EQPEDGCPFGALTQRLLQ 266
              +     + + KK L   L E       AL       H   +P +  P      R  Q
Sbjct: 568 KKLQEQQKTILELKKNLQ--LAEAQWAAEHALAVTEAQSHLLSKPREEEP------RTCQ 619

Query: 267 ALVEENIISPMEDSPIPDMSGKESGADGASTSPRNQNKPFSVPHTKSLESRI-------- 318
            LV   + SP  +      S   +   G    P+    P   P  K++E R         
Sbjct: 620 MLVNSPVASPGTEG----RSDSRNSLSGLRRKPKQLMTPH--PILKAMEERAIQRAECRR 673

Query: 319 ---------KEELIAQGLLESEDRPAEDSEDEVLAELRKRQ----AELKALSAHNRTKKH 365
                    +EE +AQ   + E+R   ++E++     RKR+     ++K L    R K++
Sbjct: 674 ILAEKKKKQEEEKLAQLKAQEEERQKREAEEKEAQLERKREEKRLKKMKELEKQKRIKRN 733

Query: 366 DLL 368
             L
Sbjct: 734 QQL 736


>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
           [Homo sapiens]
          Length = 540

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 42/175 (24%), Positives = 64/175 (36%), Gaps = 37/175 (21%)

Query: 167 SEEVRTLEELLKPPEDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAAVADKKKGLM 226
           SEEV T EEL+   + E       P+ K          + E+ K     + V +K K  +
Sbjct: 216 SEEVATKEELVADAKVEKPEKAKSPVPK--------SPVEEKGKSPVPKSPVEEKGKSPV 267

Query: 227 GPLTELDTKDVDALLKKS-EAQHEQPEDGCPFGALTQRLLQALVEENIISPMEDSPIPDM 285
            P + ++ K    + K   E + + P    P            VEE   SP+  SP+ + 
Sbjct: 268 -PKSPVEEKGKSPVPKSPVEEKGKSPVSKSP------------VEEKAKSPVPKSPVEEA 314

Query: 286 SGKESGADGASTSP---------------RNQNKPFSVPHTKSLESRIKEELIAQ 325
             K     G                    + + KP  VP  K  ES +KEE +A+
Sbjct: 315 KSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAE 369



 Score = 32.7 bits (73), Expect = 0.53
 Identities = 65/335 (19%), Positives = 129/335 (38%), Gaps = 68/335 (20%)

Query: 84  LKLGRDHELGAPPKHGKPKKQKLEGKAGHGPGP-----GPGRPKSKNLQPKIQ------E 132
           +K+  D E+ A  K  + ++ +    AG   GP      P    SK  +PK++      +
Sbjct: 14  VKMALDIEIAAYRKLLEGEETRFSTFAGSITGPLYTHRPPITISSKIQKPKVEAPKLKVQ 73

Query: 133 YEFTDDPIDVPRIP--KNDAPNRFWASVEPYCADITSEEVRTLEELLKPPEDEAEHYKI- 189
           ++F ++ I+  ++   K++      A  E     +  E+    EE  + PE E E     
Sbjct: 74  HKFVEEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAK 133

Query: 190 --------PPLGKHYSQRWAQEDLLEEQKD------------GARAAAVADKKKGLM--- 226
                   P + +   ++  +E   EE+++            G+     ++K++G     
Sbjct: 134 KSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEG 193

Query: 227 -----GPLTELDTKDVDALLKKSE-----------AQHEQPEDG---CPFGALTQR---- 263
                    E + K+   + +KSE           A+ E+PE      P   + ++    
Sbjct: 194 ETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSP 253

Query: 264 LLQALVEENIISPMEDSPI--------PDMSGKESGADGASTSPRNQNKPFSVPHTKSLE 315
           + ++ VEE   SP+  SP+        P    +E G    S SP  +     VP +   E
Sbjct: 254 VPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEE 313

Query: 316 SRIKEELIAQGLLESEDRPAEDSEDEVLAELRKRQ 350
           ++ K E+      E E++  +++  E   E ++ +
Sbjct: 314 AKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEK 348


>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
           [Homo sapiens]
          Length = 666

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 44/265 (16%)

Query: 99  GKPKKQKLEGK------AGHGPGPGPGRPKSKNLQPKIQEYEFTD-DPIDVPRIPKNDAP 151
           G+P  ++L G       A H  G      +S N     +  +  D DP DV +   ++AP
Sbjct: 54  GQPSNKELFGDDSEDEGASHHSGSDNHSERSDNRSEASERSDHEDNDPSDVDQHSGSEAP 113

Query: 152 NRFWASVEPYCADITSEEVRTLEELLKPPEDEAEHYKIPPLGKHYS--QRWAQEDLLEEQ 209
           N           D   E  R+        +  + H +     K +S  ++W +ED   +Q
Sbjct: 114 N-----------DDEDEGHRS--------DGGSHHSEAEGSEKAHSDDEKWGREDK-SDQ 153

Query: 210 KDGARAAAVADKKKGLMGPLTELDTKDVDALLKKSEAQHEQPEDGCPFGALTQRLLQALV 269
            D  +     D+++       +L   D D  ++ ++ + E+P+       L+    Q L 
Sbjct: 154 SDDEKIQNSDDEERAQGSDEDKLQNSDDDEKMQNTDDE-ERPQ-------LSDDERQQLS 205

Query: 270 EENIISPMEDSPIP-DMSGKESGADGA-----STSPRNQNKPFSVPHTKSLESRIKEELI 323
           EE   +  ++ P+  D   ++  +D       S   + QN     P     E R  ++  
Sbjct: 206 EEEKANSDDERPVASDNDDEKQNSDDEEQPQLSDEEKMQNSDDERPQASDEEHRHSDDEE 265

Query: 324 AQGLLESEDRPAEDSEDEVLAELRK 348
            Q   +SE     DSEDEVL   RK
Sbjct: 266 EQDH-KSESARGSDSEDEVLRMKRK 289


>gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens]
          Length = 284

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 36/198 (18%)

Query: 168 EEVRTLEELLKPPEDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAA-VADKKKGLM 226
           EE + L++ LK  EDE E Y         S + AQE L + +K    A A VA   + + 
Sbjct: 41  EEQQALQKKLKGTEDEVEKYS-------ESVKEAQEKLEQAEKKATDAEADVASLNRRIQ 93

Query: 227 GPLTELDTKD---VDALLKKSEAQHEQPEDGCPFGALTQRLLQALVEENIISPMEDSPIP 283
               ELD        AL K  EA+    E        ++R ++ ++E   +   E   + 
Sbjct: 94  LVEEELDRAQERLATALQKLEEAEKAADE--------SERGMK-VIENRAMKDEEKMELQ 144

Query: 284 DMSGKESGADGASTSPRNQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSED--- 340
           +M  KE+             K  +    +  E   ++ +I +G LE  +  AE +E    
Sbjct: 145 EMQLKEA-------------KHIAEDSDRKYEEVARKLVILEGELERSEERAEVAESRAR 191

Query: 341 EVLAELRKRQAELKALSA 358
           ++  ELR     LK+L A
Sbjct: 192 QLEEELRTMDQALKSLMA 209


>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
          Length = 2017

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 14/126 (11%)

Query: 155  WASVEPYCADITSEEVRTLEELLKPPEDEAEHY--KIPPLGKHYSQRWAQEDLLEEQKDG 212
            W  +E   A + S+  R  EELL   E E E    +I  L     Q+   E LL  + + 
Sbjct: 1006 WRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAAL-----QQERDEGLLLAESEK 1060

Query: 213  ARAAAVADKKKG-----LMGPLTELDTKDVDALLKKSEAQHEQPEDGCPFGALTQRL--L 265
             +A ++ + +K      LMG    L T  ++   +K +AQ  Q +D     ALT  L  L
Sbjct: 1061 QQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDL 1120

Query: 266  QALVEE 271
            +A  EE
Sbjct: 1121 RAQREE 1126


>gi|221139926 NHS-like 1 [Homo sapiens]
          Length = 1606

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 48/198 (24%), Positives = 69/198 (34%), Gaps = 25/198 (12%)

Query: 179  PPEDEAEHYKIPPLGKHYSQRWA----QEDLLEEQKDGARAA--AVADKKKGLMGPLTEL 232
            P  D +   K PP+ K           Q+D   E  +    A  AV     G  G +   
Sbjct: 1182 PLPDSSPSRKPPPISKKPKLFLVVPPPQKDFAVEPAENVSEALRAVPSPTTGEEGSVHSR 1241

Query: 233  DTKDVDALLKKSEAQHEQPEDGCPFGALTQRLLQALVEENI------ISPMEDSPIPDMS 286
            + K+  A    S A H  P      G     +  + VE N+      +SP      P  +
Sbjct: 1242 EAKESSAAQAGSHATH--PGTSVLEGGAAGSMSPSRVEANVPMVQPDVSPAPKQEEPAEN 1299

Query: 287  GKESGADGASTSPRNQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSEDEVLAEL 346
              ++G DG S   + Q+    VP T +  S            E+ D   ED  DEV+   
Sbjct: 1300 SADTGGDGESCLSQ-QDGAAGVPETNAAGSSS----------EACDFLKEDGNDEVMTPS 1348

Query: 347  RKRQAELKALSAHNRTKK 364
            R R  E    + H   +K
Sbjct: 1349 RPRTTEDLFAAIHRSKRK 1366


>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
          Length = 1976

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 20/185 (10%)

Query: 171  RTLEELLKPPEDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAAVADKKKGLMGPLT 230
            R LEE L+  E+     K          R   EDL+  + D  +     +K K  +    
Sbjct: 1490 RALEEALEAKEEFERQNK--------QLRADMEDLMSSKDDVGKNVHELEKSKRAL---- 1537

Query: 231  ELDTKDVDALLKKSEAQHEQPEDGCPFGALTQRLLQALVEENIISPMEDSPIPD-MSGKE 289
            E   +++   L++ E + +  ED      +  + ++A  E ++ +  E +     +  K+
Sbjct: 1538 EQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLLIKQ 1597

Query: 290  SGADGASTSPRNQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSEDEVLAELRKR 349
                 A      + +  +V   K +E  +K+       LE++   A  + DEV+ +LRK 
Sbjct: 1598 VRELEAELEDERKQRALAVASKKKMEIDLKD-------LEAQIEAANKARDEVIKQLRKL 1650

Query: 350  QAELK 354
            QA++K
Sbjct: 1651 QAQMK 1655


>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
           sapiens]
          Length = 309

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 87  GRDHELGAPPKHGKPKKQKLE-GKAGHGPGPGPGRPK 122
           G +   G PP+ GKP+ Q  + G    GP P PG+P+
Sbjct: 85  GGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPE 121



 Score = 31.2 bits (69), Expect = 1.6
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 87  GRDHELGAPPKHGKPKKQKLEG-KAGHGPGPGPGRPKSK 124
           G +   G PP+ GKP+    +G     GP P PG+P+ +
Sbjct: 64  GGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQ 102



 Score = 30.8 bits (68), Expect = 2.0
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 87  GRDHELGAPPKHGKPKKQKLEG-KAGHGPGPGPGRPK 122
           G +   G PP+ GKP+    +G     GP P PG+P+
Sbjct: 106 GGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPE 142



 Score = 30.8 bits (68), Expect = 2.0
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 87  GRDHELGAPPKHGKPKKQKLEG-KAGHGPGPGPGRPK 122
           G +   G PP+ GKP+    +G     GP P PG+P+
Sbjct: 127 GGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPE 163



 Score = 30.8 bits (68), Expect = 2.0
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 87  GRDHELGAPPKHGKPKKQKLEG-KAGHGPGPGPGRPK 122
           G +   G PP+ GKP+    +G     GP P PG+P+
Sbjct: 148 GGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPE 184



 Score = 30.8 bits (68), Expect = 2.0
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 87  GRDHELGAPPKHGKPKKQKLEG-KAGHGPGPGPGRPK 122
           G +   G PP+ GKP+    +G     GP P PG+P+
Sbjct: 190 GGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPE 226



 Score = 30.4 bits (67), Expect = 2.6
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 87  GRDHELGAPPKHGKPKKQKLE-GKAGHGPGPGPGRPK 122
           G +   G PP+ GKP+    + G    GP P PG+P+
Sbjct: 211 GGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQ 247



 Score = 29.6 bits (65), Expect = 4.5
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 87  GRDHELGAPPKHGKPKKQKLEG-KAGHGPGPGPGRPK 122
           G +   G PP  GKP+    +G     GP P PG+P+
Sbjct: 169 GGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPE 205


>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
          Length = 1460

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 48/217 (22%)

Query: 164 DITSEEVRTLEELLKPP---EDEAEH-------YKIPPLGKHYSQRWAQEDLLEEQKDGA 213
           ++ S++ + LEE L PP   E+ A+         + PP G      W + + L E    +
Sbjct: 458 ELQSKQSKGLEERLSPPLPHEERAQSPPRSLATEEEPPQGPEGQPEWKEAEELGEDSAAS 517

Query: 214 RAAAVADKKKGLMGPLTELDTKDVDALLKKSEAQHEQPEDGCPFGALTQRLLQALVEENI 273
            +  ++ +++    P          A  +K + QH Q E+  P             +E  
Sbjct: 518 LSLQLSLQREQAPSP---------PAACEKGKEQHSQAEELGP------------GQEEA 556

Query: 274 ISPMED---SPIPDMSGKESGADGASTSPRNQNKPFSVPHTKSLESRIKEELIAQGLLES 330
             P E    SP P +S      +  ST P    +  S    K++     EE +AQ +LE 
Sbjct: 557 EDPEEKVAVSPTPPVS-----PEVRSTEPVAPPEQLSEAALKAM-----EEAVAQ-VLEQ 605

Query: 331 EDRPAEDSEDEVLAELRKR---QAELKALSAHNRTKK 364
           + R   +S+ E + +LR++   + E + L  H + ++
Sbjct: 606 DQRHLLESKQEKMQQLREKLCQEEEEEILRLHQQKEQ 642


>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
          Length = 793

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 25/155 (16%), Positives = 59/155 (38%), Gaps = 24/155 (15%)

Query: 233 DTKDVDALLKKSEAQHEQPEDGCPFGALTQRLLQALVEENIISPMEDSPIPDMSGKESGA 292
           D +D +   K+ + + E+ E+    G++ +  ++ +VEE      E++ +  +   +  +
Sbjct: 176 DWRDAEENKKEDKEKEEEEEEKPKRGSIGENQVEVMVEEKTTESQEETVVMSLKNGQISS 235

Query: 293 DGASTSPRNQNKPFSVPHTKSLESRIKEELIAQ------------------------GLL 328
           +        +     + H + +E   KE   A+                          +
Sbjct: 236 EEPKQEEEREQGSDEISHHEKMEEEDKERAEAERARLEAEERERIKAEQDKKIADERARI 295

Query: 329 ESEDRPAEDSEDEVLAELRKRQAELKALSAHNRTK 363
           E+E++ A    +   AE R+R  E +  +A  R +
Sbjct: 296 EAEEKAAAQERERREAEERERMREEEKRAAEERQR 330


>gi|157504499 ankyrin repeat domain 47 [Homo sapiens]
          Length = 821

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 11/152 (7%)

Query: 82  RFLKLGRDHELGAPPKHGKPKKQKLEGKAGHGPGPGPGRPKSKNLQPKIQEYEFTDDPID 141
           R L+L + HE    P  G P+  +  G++   P   P  P    LQ   ++         
Sbjct: 139 RRLELAQTHERAPSPGRGVPRSPRGSGRSSPAPNLAPASPGPAQLQLVREQMAAA----- 193

Query: 142 VPRIPKNDAPNRFWASVEPYCADITSEEVRTLEELLKP-PEDEAEHYKIPPLGKHYSQRW 200
           + R+ + +   R    ++     + +E+ R L    +P P+ EAE        K    R 
Sbjct: 194 LRRLRELEDQARTLPELQEQVRALRAEKARLLAGRAQPEPDGEAETRP----DKLAQLRR 249

Query: 201 AQEDLLEEQKDG-ARAAAVADKKKGLMGPLTE 231
             E L   ++ G ARA+  AD   GL    +E
Sbjct: 250 LTERLATSERGGRARASPRADSPDGLAAGRSE 281


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 20/185 (10%)

Query: 171  RTLEELLKPPEDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAAVADKKKGLMGPLT 230
            R LEE +   E +AE   +  L K +  R   EDL+  + D  ++    +K K  +    
Sbjct: 1483 RALEEAM---EQKAE---LERLNKQF--RTEMEDLMSSKDDVGKSVHELEKSKRAL---- 1530

Query: 231  ELDTKDVDALLKKSEAQHEQPEDGCPFGALTQRLLQALVEENIISPMEDSPIPDMS-GKE 289
            E   +++   L++ E + +  ED      +  + ++A  E ++    E S        ++
Sbjct: 1531 EQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEEKKKQLVRQ 1590

Query: 290  SGADGASTSPRNQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSEDEVLAELRKR 349
                 A      + +  +V   K LE  +K+       LE+    A  + DE + +LRK 
Sbjct: 1591 VREMEAELEDERKQRSMAVAARKKLEMDLKD-------LEAHIDSANKNRDEAIKQLRKL 1643

Query: 350  QAELK 354
            QA++K
Sbjct: 1644 QAQMK 1648


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)

Query: 92  LGAPPKHGKPKKQKLEGKAGHGPGPGPGR-PKSKNLQPKIQEYE 134
           L APP+HG P  Q     + H PG G GR P+    QP+ Q +E
Sbjct: 160 LSAPPRHG-PHPQSFRRPSAHPPGRGSGRVPRG---QPEQQAWE 199


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)

Query: 92  LGAPPKHGKPKKQKLEGKAGHGPGPGPGR-PKSKNLQPKIQEYE 134
           L APP+HG P  Q     + H PG G GR P+    QP+ Q +E
Sbjct: 160 LSAPPRHG-PHPQSFRRPSAHPPGRGSGRVPRG---QPEQQAWE 199


>gi|154091020 leucine-rich repeats and calponin homology (CH) domain
           containing 2 [Homo sapiens]
          Length = 765

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 39/169 (23%), Positives = 63/169 (37%), Gaps = 13/169 (7%)

Query: 201 AQEDLLEEQKDGARAAAVADKKKGLMGPLTELDTKDVDALLKKSEAQHEQPE--DGCPFG 258
           + ED    +  G  +   +D  +  +      D   V    + SE+  EQ    D    G
Sbjct: 333 SMEDFYPNKNHGPDSGIGSDNGEKRLSTTEPSDDDTVSLHSQVSESNREQTSRNDSHIIG 392

Query: 259 ALTQRLLQALVEENIISPMEDSPIPDMSGKESGADGASTSPRNQNKPFSVPHTKSLESRI 318
           + T       V + +    ED  +P+      G+  +          F      S +SR 
Sbjct: 393 SKTDSQKDQEVYDFVDPNTEDVAVPEQGNAHIGSFVSF---------FKGKEKCSEKSRK 443

Query: 319 KEELIAQGLLESEDRPAEDSEDEV--LAELRKRQAELKALSAHNRTKKH 365
            EEL  +  LE E   AE+ +D++  + +LRK  A+L      NR   H
Sbjct: 444 NEELGDEKRLEKEQLLAEEEDDDLKEVTDLRKIAAQLLQQEQKNRILNH 492


>gi|65287717 eukaryotic translation initiation factor 2 alpha kinase
           4 [Homo sapiens]
          Length = 1649

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 4/71 (5%)

Query: 298 SPRNQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPAEDSEDEVLAELRKRQAELKALS 357
           S  N+  P S  H + LE R +EE   Q LLE++ R  E  + E+L E+++R+ E+K   
Sbjct: 135 SEHNKPPPKSF-HEEMLERRAQEE--QQRLLEAK-RKEEQEQREILHEIQRRKEEIKEEK 190

Query: 358 AHNRTKKHDLL 368
                 K + L
Sbjct: 191 KRKEMAKQERL 201


>gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens]
          Length = 1035

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 12/156 (7%)

Query: 200 WAQEDLLEEQKDGARAAAVADKKKGLMGPLTELDTKDVDALLKKSEAQHEQPEDGCPFGA 259
           W  +D  EE      + A    KKG   P+ E    D   L ++ E      E+G   G 
Sbjct: 294 WCLDDEDEEMGTFDASGAFLPLKKGPKEPIPEEQELDFQGLEEEEEPSEGLEEEGPEAGG 353

Query: 260 LTQRLLQALVEENIISPMEDSPIPDMSGKESGADGASTSPRNQNKPFSVPHTKSLESRIK 319
                L    EE   SP   SP+P + G   G +G       +  P       + E  I+
Sbjct: 354 KELTPLPP-QEEKSSSP---SPLPTL-GPLWGTNGDGDETAEKEPP-------AAEDDIR 401

Query: 320 EELIAQGLLESEDRPAEDSEDEVLAELRKRQAELKA 355
              ++ G+  S   P +  +DE L  L++   +L A
Sbjct: 402 GIQLSPGVGSSAGPPGDLEDDEGLKHLQQEAEKLVA 437


>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
           sapiens]
          Length = 247

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 87  GRDHELGAPPKHGKPKKQKLEG-KAGHGPGPGPGRPKSKNLQPKIQEYEFTDDPIDVPRI 145
           G +   G PP  GKP++   +G    H P P PG+P+    +P  Q    +  P   P  
Sbjct: 106 GGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPE----RPPPQGGNQSQGPPPHPGK 161

Query: 146 PKNDAP 151
           P+   P
Sbjct: 162 PEGPPP 167



 Score = 30.4 bits (67), Expect = 2.6
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 87  GRDHELGAPPKHGKPKKQKLEG-KAGHGPGPGPGRPK 122
           G +   G PP  GKP+ +  +G     GP P PG+P+
Sbjct: 64  GGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPE 100


>gi|5729790 CCCTC-binding factor [Homo sapiens]
          Length = 727

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/66 (25%), Positives = 29/66 (43%)

Query: 276 PMEDSPIPDMSGKESGADGASTSPRNQNKPFSVPHTKSLESRIKEELIAQGLLESEDRPA 335
           P   +P P  + K  G     T+   QN+P ++   +   +   E +I +   E +  PA
Sbjct: 638 PQPVTPAPPPAKKRRGRPPGRTNQPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPA 697

Query: 336 EDSEDE 341
           E  E+E
Sbjct: 698 EGEEEE 703


>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 436

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 168 EEVRTLEELLKPPEDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAAVADKKKGLMG 227
           E++R  EE ++  E++    +   +GK   Q W Q++ + EQK+         K++  MG
Sbjct: 303 EQMREQEEQMREQEEQMREQE-EQMGKQEEQMWEQKEQMWEQKEQMW------KQEEQMG 355

Query: 228 PLTELDTKDVDALLKKSEAQHEQPE 252
              E   K  + + K+ E   +Q E
Sbjct: 356 EQEEQMQKQEEQVRKQEEQMRKQEE 380


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.132    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,538,545
Number of Sequences: 37866
Number of extensions: 900610
Number of successful extensions: 4150
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 4052
Number of HSP's gapped (non-prelim): 202
length of query: 369
length of database: 18,247,518
effective HSP length: 104
effective length of query: 265
effective length of database: 14,309,454
effective search space: 3792005310
effective search space used: 3792005310
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.