Guide to the Human Genome
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Name: HEXIM1 Sequence: fasta or formatted (359aa) NCBI GI: 5453682
Description:

hexamethylene bis-acetamide inducible 1

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         25           3
 C cysteine            1.4          5           1
 D aspartate           6.7         24           3
 E glutamate          14.2         51           3
 F phenylalanine       2.8         10           1
 G glycine             8.4         30           2
 H histidine           1.9          7           1
 I isoleucine          0.6          2           1
 K lysine              6.4         23           3
 L leucine             9.2         33           2
 M methionine          1.9          7           1
 N asparagine          2.5          9           2
 P proline             7.2         26           3
 Q glutamine           7.0         25           3
 R arginine            7.5         27           3
 S serine              7.2         26           2
 T threonine           3.3         12           2
 V valine              1.4          5           1
 W tryptophan          1.1          4           1
 Y tyrosine            2.2          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hexamethylene bis-acetamide inducible 1 
HEXIM2                0.252   hexamthylene bis-acetamide inducible 2 
FAM9A                 0.029   family with sequence similarity 9, member A 
RP1L1                 0.027   retinitis pigmentosa 1-like 1 
TBC1D10B              0.025   TBC1 domain family, member 10B 
IWS1                  0.024   IWS1 homolog 
PSIP1                 0.024   PC4 and SFRS1 interacting protein 1 isoform 2 [Homo...
PSIP1                 0.024   PC4 and SFRS1 interacting protein 1 isoform 2 
BCL9L                 0.022   B-cell CLL/lymphoma 9-like 
KIAA1826              0.021   hypothetical protein LOC84437 
ZNF853                0.021   zinc finger protein 853 
TCHH                  0.021   trichohyalin 
HTATSF1               0.020   HIV-1 Tat specific factor 1 
HTATSF1               0.020   HIV-1 Tat specific factor 1 
CAGE1                 0.020   cancer antigen 1 
TADA3L                0.020   transcriptional adaptor 3-like isoform a 
CCDC27                0.020   coiled-coil domain containing 27 
DZIP1L                0.020   DAZ interacting protein 1-like 
ERC2                  0.020   cytomatrix protein p110 
PRRT2                 0.020   proline-rich transmembrane protein 2 
COL4A5                0.018   type IV collagen alpha 5 isoform 2 precursor 
GRIN2D                0.018   N-methyl-D-aspartate receptor subunit 2D precursor ...
PHF20L1               0.018   PHD finger protein 20-like 1 isoform 1 
COL4A5                0.018   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.018   type IV collagen alpha 5 isoform 3 precursor 
COL11A1               0.018   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.018   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.018   alpha 1 type XI collagen isoform A preproprotein [Ho...
CSF2RB                0.018   colony stimulating factor 2 receptor, beta precursor ...
UBTF                  0.018   upstream binding transcription factor, RNA polymera...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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