Guide to the Human Genome
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Name: TADA3L Sequence: fasta or formatted (369aa) NCBI GI: 19743894
Description:

transcriptional adaptor 3-like isoform b

Referenced in:

Bromodomain Family

Other entries for this name:
alt prot [432aa] transcriptional adaptor 3-like isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         28           3
 C cysteine            1.1          4           1
 D aspartate           8.1         30           2
 E glutamate          11.1         41           2
 F phenylalanine       1.9          7           1
 G glycine             6.0         22           1
 H histidine           3.0         11           1
 I isoleucine          3.5         13           2
 K lysine              9.2         34           3
 L leucine            11.7         43           2
 M methionine          1.1          4           1
 N asparagine          1.9          7           1
 P proline             7.9         29           2
 Q glutamine           4.6         17           1
 R arginine            6.0         22           2
 S serine              6.2         23           2
 T threonine           3.8         14           1
 V valine              3.3         12           1
 W tryptophan          0.8          3           1
 Y tyrosine            1.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transcriptional adaptor 3-like isoform b 
TADA3L                1.000   transcriptional adaptor 3-like isoform a 
ZFHX3                 0.017   AT-binding transcription factor 1 
ESPNL                 0.015   espin-like 
HEXIM1                0.015   hexamethylene bis-acetamide inducible 1 
BSN                   0.014   bassoon protein 
AFF1                  0.014   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
SMEK1                 0.014   SMEK homolog 1, suppressor of mek1 
NEFM                  0.014   neurofilament, medium polypeptide 150kDa isoform 1 ...
GOLGA1                0.014   golgin 97 
KIAA1407              0.014   hypothetical protein LOC57577 
NEFM                  0.012   neurofilament, medium polypeptide 150kDa isoform 2 ...
LEO1                  0.012   Leo1, Paf1/RNA polymerase II complex component, homo...
TPM2                  0.012   tropomyosin 2 (beta) isoform 2 
CROCC                 0.012   ciliary rootlet coiled-coil 
NHSL1                 0.011   NHS-like 1 
MYH10                 0.011   myosin, heavy polypeptide 10, non-muscle 
PRB3                  0.011   proline-rich protein BstNI subfamily 3 precursor [H...
CEP164                0.011   centrosomal protein 164kDa 
CALD1                 0.011   caldesmon 1 isoform 1 
KANK3                 0.010   ankyrin repeat domain 47 
MYH9                  0.010   myosin, heavy polypeptide 9, non-muscle 
LOC643355             0.010   PREDICTED: hypothetical protein 
LOC643355             0.010   PREDICTED: hypothetical protein 
LRCH2                 0.010   leucine-rich repeats and calponin homology (CH) dom...
EIF2AK4               0.010   eukaryotic translation initiation factor 2 alpha kin...
GIGYF1                0.010   PERQ amino acid rich, with GYF domain 1 
PRB4                  0.010   proline-rich protein BstNI subfamily 4 precursor [Ho...
CTCF                  0.010   CCCTC-binding factor 
LOC100133758          0.010   PREDICTED: hypothetical protein, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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