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Search of human proteins with 197333755
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|197333755 interferon-related developmental regulator 2 [Homo
sapiens]
(506 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|197333755 interferon-related developmental regulator 2 [Homo ... 996 0.0
gi|55953131 interferon-related developmental regulator 1 [Homo s... 426 e-119
gi|55953129 interferon-related developmental regulator 1 [Homo s... 426 e-119
gi|194097341 period 1 [Homo sapiens] 40 0.005
gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens] 39 0.015
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 39 0.015
gi|71274109 nuclear factor of kappa light polypeptide gene enhan... 38 0.025
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens] 37 0.042
gi|38788260 bromodomain PHD finger transcription factor isoform ... 36 0.072
gi|38788274 bromodomain PHD finger transcription factor isoform ... 36 0.072
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 36 0.094
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 36 0.094
gi|53832026 IQ motif and Sec7 domain 2 isoform 2 [Homo sapiens] 36 0.094
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 36 0.094
gi|7706067 ameloblastin precursor [Homo sapiens] 36 0.094
gi|7657575 sirtuin 1 isoform a [Homo sapiens] 35 0.12
gi|38569484 kinesin family member 21A [Homo sapiens] 35 0.12
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 35 0.16
gi|117190342 PHD finger protein 2 [Homo sapiens] 35 0.16
gi|190358526 hypothetical protein LOC54785 [Homo sapiens] 35 0.21
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 34 0.27
gi|19923352 NK3 homeobox 1 [Homo sapiens] 34 0.27
gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo ... 34 0.27
gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo ... 34 0.27
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 34 0.27
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 34 0.27
gi|31711992 dihydrolipoamide S-acetyltransferase [Homo sapiens] 34 0.36
gi|194097448 RELT-like 2 [Homo sapiens] 34 0.36
gi|194097446 RELT-like 2 [Homo sapiens] 34 0.36
gi|120587019 zinc finger protein 318 [Homo sapiens] 34 0.36
>gi|197333755 interferon-related developmental regulator 2 [Homo
sapiens]
Length = 506
Score = 996 bits (2575), Expect = 0.0
Identities = 506/506 (100%), Positives = 506/506 (100%)
Query: 1 MAWNSPSRRPVWQGGAPREDGGARGVWLPSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPR 60
MAWNSPSRRPVWQGGAPREDGGARGVWLPSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPR
Sbjct: 1 MAWNSPSRRPVWQGGAPREDGGARGVWLPSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPR 60
Query: 61 PVPGMPRARKGNTLRKGGQRRGGGARSSAQADSGSSDDEAASEARSTASECPSLLSTTAE 120
PVPGMPRARKGNTLRKGGQRRGGGARSSAQADSGSSDDEAASEARSTASECPSLLSTTAE
Sbjct: 61 PVPGMPRARKGNTLRKGGQRRGGGARSSAQADSGSSDDEAASEARSTASECPSLLSTTAE 120
Query: 121 DSLGGDVVDEQGQQEDLEEKLKEYVDCLTDKSAKTRQGALESLRLALASRLLPDFLLERR 180
DSLGGDVVDEQGQQEDLEEKLKEYVDCLTDKSAKTRQGALESLRLALASRLLPDFLLERR
Sbjct: 121 DSLGGDVVDEQGQQEDLEEKLKEYVDCLTDKSAKTRQGALESLRLALASRLLPDFLLERR 180
Query: 181 LTLADALEKCLKKGKGEEQALAAAVLGLLCVQLGPGPKGEELFHSLQPLLVSVLSDSTAS 240
LTLADALEKCLKKGKGEEQALAAAVLGLLCVQLGPGPKGEELFHSLQPLLVSVLSDSTAS
Sbjct: 181 LTLADALEKCLKKGKGEEQALAAAVLGLLCVQLGPGPKGEELFHSLQPLLVSVLSDSTAS 240
Query: 241 PAARLHCASALGLGCYVAAADIQDLVSCLACLESVFSRFYGLGGSSTSPVVPASLHGLLS 300
PAARLHCASALGLGCYVAAADIQDLVSCLACLESVFSRFYGLGGSSTSPVVPASLHGLLS
Sbjct: 241 PAARLHCASALGLGCYVAAADIQDLVSCLACLESVFSRFYGLGGSSTSPVVPASLHGLLS 300
Query: 301 AALQAWALLLTICPSTQISHILDRQLPRLPQLLSSESVNLRIAAGETIALLFELARDLEE 360
AALQAWALLLTICPSTQISHILDRQLPRLPQLLSSESVNLRIAAGETIALLFELARDLEE
Sbjct: 301 AALQAWALLLTICPSTQISHILDRQLPRLPQLLSSESVNLRIAAGETIALLFELARDLEE 360
Query: 361 EFVYEDMEALCSVLRTLATDSNKYRAKADRRRQRSTFRAVLHSVEGGECEEEIVRFGFEV 420
EFVYEDMEALCSVLRTLATDSNKYRAKADRRRQRSTFRAVLHSVEGGECEEEIVRFGFEV
Sbjct: 361 EFVYEDMEALCSVLRTLATDSNKYRAKADRRRQRSTFRAVLHSVEGGECEEEIVRFGFEV 420
Query: 421 LYMDSWARHRIYAAFKEVLGSGMHHHLQNNELLRDIFGLGPVLLLDATALKACKVPRFEK 480
LYMDSWARHRIYAAFKEVLGSGMHHHLQNNELLRDIFGLGPVLLLDATALKACKVPRFEK
Sbjct: 421 LYMDSWARHRIYAAFKEVLGSGMHHHLQNNELLRDIFGLGPVLLLDATALKACKVPRFEK 480
Query: 481 HLYNAAAFKARTKARSRVRDKRADIL 506
HLYNAAAFKARTKARSRVRDKRADIL
Sbjct: 481 HLYNAAAFKARTKARSRVRDKRADIL 506
>gi|55953131 interferon-related developmental regulator 1 [Homo
sapiens]
Length = 451
Score = 426 bits (1095), Expect = e-119
Identities = 228/451 (50%), Positives = 310/451 (68%), Gaps = 14/451 (3%)
Query: 65 MPRARKGNTLRKGGQRRGGGARSSAQ--ADSGS--------SDDEAASEARSTASECPSL 114
MP+ +K NT +G GGG+ ++A A +G SD++A+ E S S S
Sbjct: 1 MPKNKKRNTPHRGSSAGGGGSGAAAATAATAGGQHRNVQPFSDEDASIETMSHCSGY-SD 59
Query: 115 LSTTAEDSLGGDVVDEQGQQEDLEEKLKEYVDCLTDKSAKTRQGALESLRLALASRLLPD 174
S+ AED G +V+DE+G QEDLE KLK +D DKSAKTRQ ALE ++ ALAS++L +
Sbjct: 60 PSSFAED--GPEVLDEEGTQEDLEYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYE 117
Query: 175 FLLERRLTLADALEKCLKKGKGEEQALAAAVLGLLCVQLGPGPKGEELFHSLQPLLVSVL 234
F+LERR+TL D++E+CLKKGK +EQ AAA+ +LC+QLGPG + EE+ +L P+L ++
Sbjct: 118 FILERRMTLTDSIERCLKKGKSDEQRAAAALASVLCIQLGPGIESEEILKTLGPILKKII 177
Query: 235 SDSTASPAARLHCASALGLGCYVAAADIQDLVSCLACLESVFSRFYGLGGSSTSPVVPAS 294
D +AS AR CA+ G+ C++A DI +L S L CLE++F++ Y L T+ +
Sbjct: 178 CDGSASMQARQTCATCFGVCCFIATDDITELYSTLECLENIFTKSY-LKEKDTTVICSTP 236
Query: 295 LHGLLSAALQAWALLLTICPSTQISHILDRQLPRLPQLLSSESVNLRIAAGETIALLFEL 354
L ++L AW LLLTICP ++ L+ +LP LLS + VN+RIAAGE++ALLFEL
Sbjct: 237 NTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFEL 296
Query: 355 ARDLEEEFVYEDMEALCSVLRTLATDSNKYRAKADRRRQRSTFRAVLHSVEGGECEEEIV 414
AR +E +F YEDME+L +LR LATD NK+RAK D+R+QRS FR VL +VE + E +
Sbjct: 297 ARGIESDFFYEDMESLTQMLRALATDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETI 356
Query: 415 RFGFEVLYMDSWARHRIYAAFKEVLGSGMHHHLQNNELLRDIFGLGPVLLLDATALKACK 474
+FG E +Y+D W + Y FKEVLGSGM +HLQ+NE LR++F LGP ++LDA LK K
Sbjct: 357 KFGPERMYIDCWVKKHTYDTFKEVLGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMK 416
Query: 475 VPRFEKHLYNAAAFKARTKARSRVRDKRADI 505
+ RFE+HLYN+AAFKARTKARS+ RDKRAD+
Sbjct: 417 ISRFERHLYNSAAFKARTKARSKCRDKRADV 447
>gi|55953129 interferon-related developmental regulator 1 [Homo
sapiens]
Length = 451
Score = 426 bits (1095), Expect = e-119
Identities = 228/451 (50%), Positives = 310/451 (68%), Gaps = 14/451 (3%)
Query: 65 MPRARKGNTLRKGGQRRGGGARSSAQ--ADSGS--------SDDEAASEARSTASECPSL 114
MP+ +K NT +G GGG+ ++A A +G SD++A+ E S S S
Sbjct: 1 MPKNKKRNTPHRGSSAGGGGSGAAAATAATAGGQHRNVQPFSDEDASIETMSHCSGY-SD 59
Query: 115 LSTTAEDSLGGDVVDEQGQQEDLEEKLKEYVDCLTDKSAKTRQGALESLRLALASRLLPD 174
S+ AED G +V+DE+G QEDLE KLK +D DKSAKTRQ ALE ++ ALAS++L +
Sbjct: 60 PSSFAED--GPEVLDEEGTQEDLEYKLKGLIDLTLDKSAKTRQAALEGIKNALASKMLYE 117
Query: 175 FLLERRLTLADALEKCLKKGKGEEQALAAAVLGLLCVQLGPGPKGEELFHSLQPLLVSVL 234
F+LERR+TL D++E+CLKKGK +EQ AAA+ +LC+QLGPG + EE+ +L P+L ++
Sbjct: 118 FILERRMTLTDSIERCLKKGKSDEQRAAAALASVLCIQLGPGIESEEILKTLGPILKKII 177
Query: 235 SDSTASPAARLHCASALGLGCYVAAADIQDLVSCLACLESVFSRFYGLGGSSTSPVVPAS 294
D +AS AR CA+ G+ C++A DI +L S L CLE++F++ Y L T+ +
Sbjct: 178 CDGSASMQARQTCATCFGVCCFIATDDITELYSTLECLENIFTKSY-LKEKDTTVICSTP 236
Query: 295 LHGLLSAALQAWALLLTICPSTQISHILDRQLPRLPQLLSSESVNLRIAAGETIALLFEL 354
L ++L AW LLLTICP ++ L+ +LP LLS + VN+RIAAGE++ALLFEL
Sbjct: 237 NTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPSLLSCDDVNMRIAAGESLALLFEL 296
Query: 355 ARDLEEEFVYEDMEALCSVLRTLATDSNKYRAKADRRRQRSTFRAVLHSVEGGECEEEIV 414
AR +E +F YEDME+L +LR LATD NK+RAK D+R+QRS FR VL +VE + E +
Sbjct: 297 ARGIESDFFYEDMESLTQMLRALATDGNKHRAKVDKRKQRSVFRDVLRAVEERDFPTETI 356
Query: 415 RFGFEVLYMDSWARHRIYAAFKEVLGSGMHHHLQNNELLRDIFGLGPVLLLDATALKACK 474
+FG E +Y+D W + Y FKEVLGSGM +HLQ+NE LR++F LGP ++LDA LK K
Sbjct: 357 KFGPERMYIDCWVKKHTYDTFKEVLGSGMQYHLQSNEFLRNVFELGPPVMLDAATLKTMK 416
Query: 475 VPRFEKHLYNAAAFKARTKARSRVRDKRADI 505
+ RFE+HLYN+AAFKARTKARS+ RDKRAD+
Sbjct: 417 ISRFERHLYNSAAFKARTKARSKCRDKRADV 447
>gi|194097341 period 1 [Homo sapiens]
Length = 1290
Score = 40.0 bits (92), Expect = 0.005
Identities = 44/175 (25%), Positives = 66/175 (37%), Gaps = 35/175 (20%)
Query: 50 PTGSLTPRPP--RPVPGMPRA---------RKGNTLRKGGQRRGGGARSSAQADSGSSDD 98
P G +P PP RP PG A GN G + RG RSS + SG+ D
Sbjct: 22 PGGVPSPGPPQHRPCPGPSLADDTDANSNGSSGNE-SNGHESRGASQRSSHSSSSGNGKD 80
Query: 99 EAASEARSTASECPSLLSTTAEDSLGGDVVDEQGQQEDLEEKLKEYVDCLTDKSAKTR-Q 157
A E ++ S + S+ ++ +Q++ C +++SA+ R Q
Sbjct: 81 SALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPSTS-----GCSSEQSARARTQ 135
Query: 158 GALESLRLALASRLLPDFLLERRLTLADALEKCLKKGKGEEQALAAAVLGLLCVQ 212
L + L RL P+ ++GKG LA L CV+
Sbjct: 136 KELMTALRELKLRLPPE-----------------RRGKGRSGTLATLQYALACVK 173
>gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens]
Length = 602
Score = 38.5 bits (88), Expect = 0.015
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 44 VGLEPTPTGSLTPRPPRPVPGM-PRARKGNTLRKGGQRRGGGARSSAQADSGSSDDEAAS 102
V +P P P PP P P P+ N G RGGG + S S+ AA+
Sbjct: 32 VAKKPPPAPQQPPPPPAPHPQQHPQQHPQNQAHGKGGHRGGGGGGGKSSSSSSASAAAAA 91
Query: 103 EARSTASEC 111
A S+++ C
Sbjct: 92 AAASSSASC 100
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 38.5 bits (88), Expect = 0.015
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 30 SSGQVSAQRTGRRL-----VGLEPTPTGSLTP-------RPPRPVPGMPRARKGNTLRKG 77
SSG S+ G L V L+ P+ + P RPP P P + R ++
Sbjct: 2555 SSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSS 2614
Query: 78 GQRRGGGARSSAQADSGSSDDEAASEARSTASECPS 113
+ SS+ + S SS ++S + S++S PS
Sbjct: 2615 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650
Score = 33.1 bits (74), Expect = 0.61
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 15/100 (15%)
Query: 23 ARGVWLPSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPRPVPGMPRARKGNTLRKGGQRRG 82
+ G LP +V+ +R PTP R RP P RK RR
Sbjct: 2563 SEGSSLPVQPEVALKRVP------SPTPAPKEAVREGRPPEPTPAKRK---------RRS 2607
Query: 83 GGARSSAQADSGSSDDEAASEARSTASECPSLLSTTAEDS 122
+ SS+ + S SS ++S + S++S S S+++ S
Sbjct: 2608 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2647
>gi|71274109 nuclear factor of kappa light polypeptide gene enhancer
in B-cells inhibitor, epsilon [Homo sapiens]
Length = 500
Score = 37.7 bits (86), Expect = 0.025
Identities = 38/108 (35%), Positives = 44/108 (40%), Gaps = 12/108 (11%)
Query: 8 RRPVWQGGAPREDGGARGVWLPSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPRPVPGMPR 67
RRP W GGA R G A V LP+ V+A T L L G P P P PR
Sbjct: 49 RRPCWSGGAGRGGGPAWAVRLPT---VTAGWTWPALRTLSSLRAGPSEPHSPGRRP--PR 103
Query: 68 ARKGNTLRKGGQRRGGGARSSAQADSGSSDDEAA-----SEARSTASE 110
A G L + + G AR S + D + A SEAR E
Sbjct: 104 A--GRPLCQADPQPGKAARRSLEPDPAQTGPRPARAAGMSEARKGPDE 149
>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
Length = 352
Score = 37.0 bits (84), Expect = 0.042
Identities = 54/240 (22%), Positives = 84/240 (35%), Gaps = 29/240 (12%)
Query: 7 SRRPVWQGGAPREDGGARGVWLPSSGQVSAQRTGRRL-------------VGLEPTPTGS 53
+ R + GA D G RG + A G R L P
Sbjct: 32 AERAALEVGAASADTGVRGCGARGPAPLLASAGGGRARDGTWGVRTKGSGAALPSRPASR 91
Query: 54 LTPRPPRPVPGMP--RARKGNTLRKGGQRRGGGAR--SSAQADSGSSDDEAASEARSTAS 109
PRP P +P +AR G + +GG+ RG A S ++ S S SE R S
Sbjct: 92 AAPRPEASSPPLPLEKARGGLSGPQGGRARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKS 151
Query: 110 ECPSLLSTTAEDSLGGDVVDEQGQQEDLEEKLKEYVDCLTDKSAKTRQGALESLRLALAS 169
+ + +A S G G +E ++K + + S+ + + S + +S
Sbjct: 152 RKDTSRNCSASTSQGRKASTAPGAEERSKQKARRRTRSSSSSSSSSSSSSSSSSSSSSSS 211
Query: 170 ----RLLPDFLLERRLTLADALEKCLKKGKGEEQALAAAVLGLLCVQLGPGPKGEELFHS 225
R ++R +K KKGK + +A L PGP ++ S
Sbjct: 212 SSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEAL--------PGPSLDQWHRS 263
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 36.2 bits (82), Expect = 0.072
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 6 PSRRPVWQGGAPREDGGARGVWLPSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPRPVPGM 65
P+ P+ G R G +RG W + +V+ + RL + P PP P P
Sbjct: 31 PTSGPIG-GLRSRHRGSSRGRWAAAQAEVAPKT---RLSSPRGGSSSRRKPPPPPPAPPS 86
Query: 66 PRARKGNTLRKGGQRRGGG------ARSSAQADSGSS---DDEAASEARSTASECPSLLS 116
A GG R GGG AR++A + + DD + E +
Sbjct: 87 TSAPGRGGRGGGGGRTGGGGGGGHLARTTAARRAVNKVVYDDHESEEEEEEED-----MV 141
Query: 117 TTAEDSLGGDVVDEQGQQEDLEEKLKE 143
+ E+ GD + Q ++D E++++E
Sbjct: 142 SEEEEEEDGDAEETQDSEDDEEDEMEE 168
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 36.2 bits (82), Expect = 0.072
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 6 PSRRPVWQGGAPREDGGARGVWLPSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPRPVPGM 65
P+ P+ G R G +RG W + +V+ + RL + P PP P P
Sbjct: 31 PTSGPIG-GLRSRHRGSSRGRWAAAQAEVAPKT---RLSSPRGGSSSRRKPPPPPPAPPS 86
Query: 66 PRARKGNTLRKGGQRRGGG------ARSSAQADSGSS---DDEAASEARSTASECPSLLS 116
A GG R GGG AR++A + + DD + E +
Sbjct: 87 TSAPGRGGRGGGGGRTGGGGGGGHLARTTAARRAVNKVVYDDHESEEEEEEED-----MV 141
Query: 117 TTAEDSLGGDVVDEQGQQEDLEEKLKE 143
+ E+ GD + Q ++D E++++E
Sbjct: 142 SEEEEEEDGDAEETQDSEDDEEDEMEE 168
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 35.8 bits (81), Expect = 0.094
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 25/102 (24%)
Query: 69 RKGNTLRKGGQRRG---GGARSSAQADSGSSDDEAASE--------ARSTASECPSLLST 117
RKG LRK + RG GG+++++ +++ A S R ASE P L +T
Sbjct: 981 RKGFQLRKTARGRGDTDGGSKAASMDPPRATEPVATSNPAGDPVGSTRCPASE-PGLDAT 1039
Query: 118 TAEDSLGGDVVD-------------EQGQQEDLEEKLKEYVD 146
TA +S G D+VD E+G LE + YVD
Sbjct: 1040 TASESRGWDLVDAVTPGPQPTLEQLEEGGPRPLERRSSWYVD 1081
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 35.8 bits (81), Expect = 0.094
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 25/102 (24%)
Query: 69 RKGNTLRKGGQRRG---GGARSSAQADSGSSDDEAASE--------ARSTASECPSLLST 117
RKG LRK + RG GG+++++ +++ A S R ASE P L +T
Sbjct: 981 RKGFQLRKTARGRGDTDGGSKAASMDPPRATEPVATSNPAGDPVGSTRCPASE-PGLDAT 1039
Query: 118 TAEDSLGGDVVD-------------EQGQQEDLEEKLKEYVD 146
TA +S G D+VD E+G LE + YVD
Sbjct: 1040 TASESRGWDLVDAVTPGPQPTLEQLEEGGPRPLERRSSWYVD 1081
>gi|53832026 IQ motif and Sec7 domain 2 isoform 2 [Homo sapiens]
Length = 949
Score = 35.8 bits (81), Expect = 0.094
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 48 PTPTGSLTPRPPRPVPGMPRARKGNTLRKGGQRRGGGARSSAQADSGSSDDEAASEARST 107
P P G P PP P+P P + G + GG+R G + +D G ++ +S +
Sbjct: 444 PAPEGP-APAPPGPLPPAPNSGTGPSGVAGGRRLGKCEAAGENSDGGDNESLESSSNSNE 502
Query: 108 ASECPSLLSTTAEDSL 123
C S +++ DSL
Sbjct: 503 TINCSS--GSSSRDSL 516
Score = 29.3 bits (64), Expect = 8.8
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 37 QRTGRRLVGLEPTPTG-----SLTPRPPRPVPGMPRARKGNTLRKGGQRRGGG 84
Q++ RL EP P G + P PP P P +P + + R+ G RRG G
Sbjct: 321 QQSPERLPSTEPPPQGRPEFWAPAPLPPVP-PPVPSGTREDGSREEGTRRGPG 372
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 35.8 bits (81), Expect = 0.094
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 48 PTPTGSLTPRPPRPVPGMPRARKGNTLRKGGQRRGGGARSSAQADSGSSDDEAASEARST 107
P P G P PP P+P P + G + GG+R G + +D G ++ +S +
Sbjct: 649 PAPEGP-APAPPGPLPPAPNSGTGPSGVAGGRRLGKCEAAGENSDGGDNESLESSSNSNE 707
Query: 108 ASECPSLLSTTAEDSL 123
C S +++ DSL
Sbjct: 708 TINCSS--GSSSRDSL 721
Score = 29.3 bits (64), Expect = 8.8
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 37 QRTGRRLVGLEPTPTG-----SLTPRPPRPVPGMPRARKGNTLRKGGQRRGGG 84
Q++ RL EP P G + P PP P P +P + + R+ G RRG G
Sbjct: 526 QQSPERLPSTEPPPQGRPEFWAPAPLPPVP-PPVPSGTREDGSREEGTRRGPG 577
>gi|7706067 ameloblastin precursor [Homo sapiens]
Length = 447
Score = 35.8 bits (81), Expect = 0.094
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 15 GAPREDGGARGVWLPSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPRPVPGMPRARKG 71
G E+GGA+G +P + + + L LEP P L P +PG+PR+ G
Sbjct: 315 GPENEEGGAQGSPMPEANPDNLENPAF-LTELEPAPHAGLLALPKDDIPGLPRSPSG 370
>gi|7657575 sirtuin 1 isoform a [Homo sapiens]
Length = 747
Score = 35.4 bits (80), Expect = 0.12
Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 11/130 (8%)
Query: 14 GGAPREDGGARGVWLPSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPRPVPGMPRARKGNT 73
GG+P G R +G+ +R R GLE +P P R VP R G
Sbjct: 12 GGSPSAAGADREAASSPAGEPLRKRPRRDGPGLERSPGEPGGAAPEREVPAAARGCPG-- 69
Query: 74 LRKGGQRRGGGARSSAQADSGSSDDEAASEARSTASE---CPSLLSTTAEDSLGGDVVDE 130
A+A++ ++ E ++A + A E P L + E L ++ DE
Sbjct: 70 ------AAAAALWREAEAEAAAAGGEQEAQATAAAGEGDNGPGLQGPSREPPLADNLYDE 123
Query: 131 QGQQEDLEEK 140
E EE+
Sbjct: 124 DDDDEGEEEE 133
>gi|38569484 kinesin family member 21A [Homo sapiens]
Length = 1661
Score = 35.4 bits (80), Expect = 0.12
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 92 DSGSSDDEAASEARSTASECPSLLSTTAEDSLGGDVVDE-QGQQEDLEEKLKEYVDCLTD 150
D G S DE+ SE+ A+ L + T E ++ ++DE + Q+ L+ K+Y + L
Sbjct: 612 DGGESSDESDSESDEKANYQADLANITCEIAIKQKLIDELENSQKRLQTLKKQYEEKLMM 671
Query: 151 KSAKTRQGALESLRLALASRLLPDFLLERRLTLADALEKCLKKGKGEEQALAAA 204
K R LE ++ + + E+ + EK L+ E Q L AA
Sbjct: 672 LQHKIRDTQLERDQVLQNLGSVESYSEEKAKKVRSEYEKKLQAMNKELQRLQAA 725
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 35.0 bits (79), Expect = 0.16
Identities = 38/119 (31%), Positives = 49/119 (41%), Gaps = 12/119 (10%)
Query: 6 PSRRPVWQGGAPREDGGARGVWLPSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPRPVPGM 65
P+R W+G A GA GV G G R +G P + P P PG
Sbjct: 54 PTRAREWEGAAWA--AGATGV-----GAALLALPGSRRLGRVPL---TFREASPGPAPGA 103
Query: 66 PRARKGNTLRKGGQRRGGGARSSAQADSGSSDDEAASEARSTASECPSLLSTTAEDSLG 124
PRAR G+ R+ G RR A SSA ++ A RS A P + + S+G
Sbjct: 104 PRAR-GSCGREPGPRR-RRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVG 160
>gi|117190342 PHD finger protein 2 [Homo sapiens]
Length = 1096
Score = 35.0 bits (79), Expect = 0.16
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Query: 50 PTGSLTPRPPRPVPGMPRARKGNTLRKGGQRRGGGARSSAQADSGSSD-DEAASEARSTA 108
P S P+PP+P P PR K L+ GG+++G +R SA + D EA ++ T
Sbjct: 500 PKPSKIPKPPKP-PKPPRPPKTLKLKDGGKKKGKKSRESASPTIPNLDLLEAHTKEALTK 558
Query: 109 SECPSLLSTTAE--DSLGGDVVDEQGQQEDLEEKLKEYVDCLTDKSAKTRQGALESL 163
E P T DVV Q E LE ++E ++ K + +SL
Sbjct: 559 MEPPKKGKATKSVLSVPNKDVVHMQNDVERLE--IREQTKSKSEAKWKYKNSKPDSL 613
>gi|190358526 hypothetical protein LOC54785 [Homo sapiens]
Length = 357
Score = 34.7 bits (78), Expect = 0.21
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 32 GQVSAQRTGRRLVGLEPTPTGSLTPRPPRPVPGMPRARKGNTLRKGGQRRGGGARSSAQA 91
G +S + R G E P SL+ R P P + G R+GG GG Q
Sbjct: 86 GTLSGAGSRRGAPGAEHEP--SLSSRHKNPAPPEGKPSSGRDCRRGGP---GGGMDVEQQ 140
Query: 92 DSGSSDDEAASEARSTASECPSLLSTTAEDSL 123
+ +D+EAA+ +R+ S L + + D L
Sbjct: 141 EEEDNDEEAAAGSRAGRSFSSRLQDSRSLDGL 172
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
[Homo sapiens]
Length = 3969
Score = 34.3 bits (77), Expect = 0.27
Identities = 35/113 (30%), Positives = 45/113 (39%), Gaps = 13/113 (11%)
Query: 3 WNSPSRRPVWQGGAPREDGGARGVWLPSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPRPV 62
W P+R GG GG RG+ G QR L+ P G PP P
Sbjct: 7 WRFPARPGTTGGGG---GGGRRGL-----GGAPRQRVPALLLPPGPPVGGGGPGAPPSP- 57
Query: 63 PGMPRARKGNTLRKGGQRRGGGARSSAQADSGSSDDEAASEARSTASECPSLL 115
P + A G G A S+A + S SS +S + S+AS P+LL
Sbjct: 58 PAVAAAAAAAGSSGAGVPGGAAAASAASSSSASS----SSSSSSSASSGPALL 106
>gi|19923352 NK3 homeobox 1 [Homo sapiens]
Length = 234
Score = 34.3 bits (77), Expect = 0.27
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 15/89 (16%)
Query: 58 PPRPVPGMPRARKGNTLRKGGQRRGGGARSSAQAD---------------SGSSDDEAAS 102
PP P + + LR G QR+GG S Q D +G+ +D+ ++
Sbjct: 19 PPTPSKPLTSFLIQDILRDGAQRQGGRTSSQRQRDPEPEPEPEPEGGRSRAGAQNDQLST 78
Query: 103 EARSTASECPSLLSTTAEDSLGGDVVDEQ 131
R+ E +L T E LG ++D +
Sbjct: 79 GPRAAPEEAETLAETEPERHLGSYLLDSE 107
>gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo
sapiens]
Length = 177
Score = 34.3 bits (77), Expect = 0.27
Identities = 30/99 (30%), Positives = 35/99 (35%), Gaps = 16/99 (16%)
Query: 28 LPSSGQVSAQRTGRRLVGLEP---------TPTGSLTPRP-------PRPVPGMPRARKG 71
LPS G R GRR +GL P S +PRP PRPVPG R R
Sbjct: 40 LPSGGLRLRARPGRRALGLPSPLELAAPSLVPNASASPRPVSCRRAPPRPVPGAARWRGR 99
Query: 72 NTLRKGGQRRGGGARSSAQADSGSSDDEAASEARSTASE 110
R G R+ G S A R ++
Sbjct: 100 PEPRPGSPAGPAPTRARPLGAPGRSAPPARRRERELGTD 138
>gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo
sapiens]
Length = 177
Score = 34.3 bits (77), Expect = 0.27
Identities = 30/99 (30%), Positives = 35/99 (35%), Gaps = 16/99 (16%)
Query: 28 LPSSGQVSAQRTGRRLVGLEP---------TPTGSLTPRP-------PRPVPGMPRARKG 71
LPS G R GRR +GL P S +PRP PRPVPG R R
Sbjct: 40 LPSGGLRLRARPGRRALGLPSPLELAAPSLVPNASASPRPVSCRRAPPRPVPGAARWRGR 99
Query: 72 NTLRKGGQRRGGGARSSAQADSGSSDDEAASEARSTASE 110
R G R+ G S A R ++
Sbjct: 100 PEPRPGSPAGPAPTRARPLGAPGRSAPPARRRERELGTD 138
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 34.3 bits (77), Expect = 0.27
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 19/145 (13%)
Query: 29 PSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPRPVPG-----------MPRARKGNTLRKG 77
PSS + S++++ + L P+P G + + P+ G + + N G
Sbjct: 794 PSSNRESSKQSAAKEKDLLPSPAGPVPSKDPKTEHGSRKRTISQSSSLKSSSNSNKETSG 853
Query: 78 GQRRGGGA--RSSAQADSGSSDDEAASEARSTASECPSLLST--TAEDSLGGDVVDEQGQ 133
+ + + + SS E +A S++S CP T +++ V D++
Sbjct: 854 SSKNSSSTSKQKKTEGKTSSSSKEVKEKAPSSSSNCPPSAPTLDSSKPRRTKLVFDDRNY 913
Query: 134 QED--LEE--KLKEYVDCLTDKSAK 154
D L+E KLK D L+D+ K
Sbjct: 914 SADHYLQEAKKLKHNADALSDRFEK 938
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 34.3 bits (77), Expect = 0.27
Identities = 47/191 (24%), Positives = 69/191 (36%), Gaps = 30/191 (15%)
Query: 5 SPSRRPVWQGGAPREDGGARGVWLPSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPRPV-- 62
SPS RP+ + E + PS V + R + G P P P PP PV
Sbjct: 715 SPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSG-SPEPAAKKPPAPPSPVQS 773
Query: 63 --------PGMP-RARKGNTLR----KGGQRRGGGARSSAQADSGSSDD----------- 98
P +P + K T + + GGG + + D D
Sbjct: 774 QSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKK 833
Query: 99 EAASEARSTASECPSLLSTTAEDSLGGDVVDEQGQQEDLEEKLKEYVDCLTDKSAKTRQG 158
E A A + A+ P+ ++ A +L + + E +E E D L D R+
Sbjct: 834 EKAVAAAAAAAVTPAAIA-AATTTLAQE--EPVAAPEPKKETESEAEDNLDDLEKHLREK 890
Query: 159 ALESLRLALAS 169
AL S+R A S
Sbjct: 891 ALRSMRKAQVS 901
>gi|31711992 dihydrolipoamide S-acetyltransferase [Homo sapiens]
Length = 647
Score = 33.9 bits (76), Expect = 0.36
Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 13/160 (8%)
Query: 21 GGARGV--WLPSSGQVSAQRTGRRLVGLEPTPTGSLTPRPPRPVPGMPRARKGNTLRKGG 78
GG R + W PSSG R +L+G SL P P+P + + T+ +
Sbjct: 53 GGVRALCGWTPSSGATPRNRLLLQLLGSPGRRYYSLPPHQKVPLPSLSPTMQAGTIARWE 112
Query: 79 QRRG-----GGARSSAQADSGSSDDEAASEARSTASECPSLLSTTAEDSLGGDVVDEQGQ 133
++ G G + + D + E+ E + T + +G + G+
Sbjct: 113 KKEGDKINEGDLIAEVETDKATVGFESLEECYMAKI---LVAEGTRDVPIGAIICITVGK 169
Query: 134 QEDLEEKLKEYVDCLTDKSAKTRQGALESLRLALASRLLP 173
ED+ E K Y L +A T Q A A AS P
Sbjct: 170 PEDI-EAFKNYT--LDSSAAPTPQAAPAPTPAATASPPTP 206
>gi|194097448 RELT-like 2 [Homo sapiens]
Length = 303
Score = 33.9 bits (76), Expect = 0.36
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 5 SPSRRPVWQGGAPREDGGARG-------VWLPSSGQVSAQRTGRRLVGLEPTPTGSL--T 55
SP+ R W G ++ GG +G +P+ ++ +R +++ P G L +
Sbjct: 187 SPTDRS-WGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDS 245
Query: 56 PRPPRPVPGMPRARKGNTLRKGGQ 79
PR + G PRA TLR GG+
Sbjct: 246 SLTPRALEGNPRASAEPTLRAGGR 269
>gi|194097446 RELT-like 2 [Homo sapiens]
Length = 303
Score = 33.9 bits (76), Expect = 0.36
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 5 SPSRRPVWQGGAPREDGGARG-------VWLPSSGQVSAQRTGRRLVGLEPTPTGSL--T 55
SP+ R W G ++ GG +G +P+ ++ +R +++ P G L +
Sbjct: 187 SPTDRS-WGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDS 245
Query: 56 PRPPRPVPGMPRARKGNTLRKGGQ 79
PR + G PRA TLR GG+
Sbjct: 246 SLTPRALEGNPRASAEPTLRAGGR 269
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 33.9 bits (76), Expect = 0.36
Identities = 47/173 (27%), Positives = 68/173 (39%), Gaps = 46/173 (26%)
Query: 17 PREDGGARGVWLPSSGQVSAQRTG-RRLVGLEPTPTGS-------------------LTP 56
P++DGG P SG+ S +G R P P+GS +P
Sbjct: 15 PKDDGGGG----PRSGRSSGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASP 70
Query: 57 RPP---RPVPGMPRARKGNTLRKGGQRR--------GGGARSSAQAD---SGSSDDEAAS 102
PP R P PRAR+G+ G+R G +R ++AD G D S
Sbjct: 71 SPPRGRRVSPSPPRARRGSPSPPRGRRLFPPGPAGFRGSSRGESRADYARDGRGDHPGDS 130
Query: 103 EARSTASECPSLLSTTAEDSLGGDVVDEQ-----GQQEDLEEKLKEYVDCLTD 150
+R + P L S + E SL V ++ ++ L ++L VD L D
Sbjct: 131 GSRRRS---PGLCSDSLEKSLRITVGNDHFCVSTPERRRLSDRLGSPVDNLED 180
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,528,594
Number of Sequences: 37866
Number of extensions: 1047873
Number of successful extensions: 6638
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 6412
Number of HSP's gapped (non-prelim): 416
length of query: 506
length of database: 18,247,518
effective HSP length: 107
effective length of query: 399
effective length of database: 14,195,856
effective search space: 5664146544
effective search space used: 5664146544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.