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Search of human proteins with 19718790
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19718790 RAD17 homolog isoform 4 [Homo sapiens]
(584 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19718790 RAD17 homolog isoform 4 [Homo sapiens] 1176 0.0
gi|19718796 RAD17 homolog isoform 1 [Homo sapiens] 1171 0.0
gi|19718794 RAD17 homolog isoform 1 [Homo sapiens] 1171 0.0
gi|19718792 RAD17 homolog isoform 1 [Homo sapiens] 1171 0.0
gi|19718784 RAD17 homolog isoform 1 [Homo sapiens] 1171 0.0
gi|4506383 RAD17 homolog isoform 1 [Homo sapiens] 1171 0.0
gi|19718786 RAD17 homolog isoform 2 [Homo sapiens] 1171 0.0
gi|19718788 RAD17 homolog isoform 3 [Homo sapiens] 1013 0.0
gi|18426904 Werner helicase interacting protein isoform 2 [Homo ... 38 0.023
gi|31377644 ATPase family, AAA domain containing 1 [Homo sapiens] 33 0.56
gi|18426902 Werner helicase interacting protein isoform 1 [Homo ... 33 0.73
gi|27501458 CTF18, chromosome transmission fidelity factor 18 ho... 33 0.73
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom... 33 0.95
gi|45643125 nuclear VCP-like isoform 2 [Homo sapiens] 33 0.95
gi|45643123 nuclear VCP-like isoform 1 [Homo sapiens] 33 0.95
gi|157671927 spermatogenesis associated 5 [Homo sapiens] 32 1.2
gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens] 32 1.6
gi|9945308 ATP-binding cassette, sub-family D, member 2 [Homo sa... 32 1.6
gi|110349788 absent, small, or homeotic 1-like [Homo sapiens] 32 1.6
gi|32528306 replication factor C large subunit [Homo sapiens] 31 2.8
gi|4506753 RuvB-like 1 [Homo sapiens] 31 2.8
gi|226874831 guanylate kinase 1 isoform a [Homo sapiens] 31 2.8
gi|46255039 RAD51-like 1 isoform 3 [Homo sapiens] 31 3.6
gi|19924117 RAD51-like 1 isoform 2 [Homo sapiens] 31 3.6
gi|10835029 RAD51-like 1 isoform 1 [Homo sapiens] 31 3.6
gi|4502703 cell division cycle 6 protein [Homo sapiens] 31 3.6
gi|31795544 origin recognition complex, subunit 1 [Homo sapiens] 31 3.6
gi|32455236 helicase (DNA) B [Homo sapiens] 31 3.6
gi|7262393 ATP-binding cassette, sub-family D (ALD), member 1 [H... 30 4.7
gi|40806173 spastic paraplegia 7 isoform 2 [Homo sapiens] 30 4.7
>gi|19718790 RAD17 homolog isoform 4 [Homo sapiens]
Length = 584
Score = 1176 bits (3041), Expect = 0.0
Identities = 584/584 (100%), Positives = 584/584 (100%)
Query: 1 MNQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQ 60
MNQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQ
Sbjct: 1 MNQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQ 60
Query: 61 VQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLR 120
VQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLR
Sbjct: 61 VQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLR 120
Query: 121 TDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQ 180
TDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQ
Sbjct: 121 TDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQ 180
Query: 181 EECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAI 240
EECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAI
Sbjct: 181 EECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAI 240
Query: 241 NSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLF 300
NSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLF
Sbjct: 241 NSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLF 300
Query: 301 RALGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNY 360
RALGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNY
Sbjct: 301 RALGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNY 360
Query: 361 IDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGG 420
IDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGG
Sbjct: 361 IDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGG 420
Query: 421 GSSFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQ 480
GSSFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQ
Sbjct: 421 GSSFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQ 480
Query: 481 ISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATV 540
ISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATV
Sbjct: 481 ISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATV 540
Query: 541 PETWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 584
PETWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 541 PETWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 584
>gi|19718796 RAD17 homolog isoform 1 [Homo sapiens]
Length = 670
Score = 1171 bits (3030), Expect = 0.0
Identities = 582/582 (100%), Positives = 582/582 (100%)
Query: 3 QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 62
QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ
Sbjct: 89 QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 148
Query: 63 EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 122
EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD
Sbjct: 149 EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 208
Query: 123 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 182
KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE
Sbjct: 209 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 268
Query: 183 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 242
CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 243 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 302
LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA
Sbjct: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 388
Query: 303 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 362
LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID
Sbjct: 389 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 448
Query: 363 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 422
FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS
Sbjct: 449 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 508
Query: 423 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 482
SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS
Sbjct: 509 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 568
Query: 483 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 542
FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE
Sbjct: 569 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 628
Query: 543 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 584
TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 629 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 670
>gi|19718794 RAD17 homolog isoform 1 [Homo sapiens]
Length = 670
Score = 1171 bits (3030), Expect = 0.0
Identities = 582/582 (100%), Positives = 582/582 (100%)
Query: 3 QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 62
QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ
Sbjct: 89 QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 148
Query: 63 EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 122
EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD
Sbjct: 149 EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 208
Query: 123 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 182
KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE
Sbjct: 209 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 268
Query: 183 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 242
CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 243 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 302
LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA
Sbjct: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 388
Query: 303 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 362
LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID
Sbjct: 389 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 448
Query: 363 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 422
FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS
Sbjct: 449 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 508
Query: 423 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 482
SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS
Sbjct: 509 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 568
Query: 483 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 542
FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE
Sbjct: 569 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 628
Query: 543 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 584
TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 629 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 670
>gi|19718792 RAD17 homolog isoform 1 [Homo sapiens]
Length = 670
Score = 1171 bits (3030), Expect = 0.0
Identities = 582/582 (100%), Positives = 582/582 (100%)
Query: 3 QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 62
QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ
Sbjct: 89 QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 148
Query: 63 EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 122
EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD
Sbjct: 149 EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 208
Query: 123 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 182
KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE
Sbjct: 209 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 268
Query: 183 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 242
CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 243 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 302
LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA
Sbjct: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 388
Query: 303 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 362
LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID
Sbjct: 389 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 448
Query: 363 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 422
FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS
Sbjct: 449 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 508
Query: 423 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 482
SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS
Sbjct: 509 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 568
Query: 483 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 542
FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE
Sbjct: 569 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 628
Query: 543 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 584
TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 629 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 670
>gi|19718784 RAD17 homolog isoform 1 [Homo sapiens]
Length = 670
Score = 1171 bits (3030), Expect = 0.0
Identities = 582/582 (100%), Positives = 582/582 (100%)
Query: 3 QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 62
QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ
Sbjct: 89 QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 148
Query: 63 EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 122
EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD
Sbjct: 149 EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 208
Query: 123 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 182
KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE
Sbjct: 209 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 268
Query: 183 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 242
CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 243 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 302
LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA
Sbjct: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 388
Query: 303 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 362
LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID
Sbjct: 389 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 448
Query: 363 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 422
FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS
Sbjct: 449 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 508
Query: 423 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 482
SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS
Sbjct: 509 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 568
Query: 483 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 542
FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE
Sbjct: 569 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 628
Query: 543 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 584
TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 629 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 670
>gi|4506383 RAD17 homolog isoform 1 [Homo sapiens]
Length = 670
Score = 1171 bits (3030), Expect = 0.0
Identities = 582/582 (100%), Positives = 582/582 (100%)
Query: 3 QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 62
QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ
Sbjct: 89 QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 148
Query: 63 EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 122
EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD
Sbjct: 149 EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 208
Query: 123 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 182
KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE
Sbjct: 209 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 268
Query: 183 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 242
CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 243 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 302
LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA
Sbjct: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 388
Query: 303 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 362
LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID
Sbjct: 389 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 448
Query: 363 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 422
FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS
Sbjct: 449 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 508
Query: 423 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 482
SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS
Sbjct: 509 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 568
Query: 483 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 542
FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE
Sbjct: 569 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 628
Query: 543 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 584
TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 629 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 670
>gi|19718786 RAD17 homolog isoform 2 [Homo sapiens]
Length = 681
Score = 1171 bits (3030), Expect = 0.0
Identities = 582/582 (100%), Positives = 582/582 (100%)
Query: 3 QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 62
QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ
Sbjct: 100 QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 159
Query: 63 EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 122
EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD
Sbjct: 160 EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 219
Query: 123 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 182
KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE
Sbjct: 220 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 279
Query: 183 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 242
CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS
Sbjct: 280 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 339
Query: 243 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 302
LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA
Sbjct: 340 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 399
Query: 303 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 362
LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID
Sbjct: 400 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 459
Query: 363 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 422
FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS
Sbjct: 460 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 519
Query: 423 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 482
SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS
Sbjct: 520 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 579
Query: 483 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 542
FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE
Sbjct: 580 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 639
Query: 543 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 584
TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 640 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 681
>gi|19718788 RAD17 homolog isoform 3 [Homo sapiens]
Length = 505
Score = 1013 bits (2620), Expect = 0.0
Identities = 505/505 (100%), Positives = 505/505 (100%)
Query: 80 MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 139
MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS
Sbjct: 1 MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 60
Query: 140 HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 199
HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM
Sbjct: 61 HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 120
Query: 200 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 259
KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK
Sbjct: 121 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 180
Query: 260 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 319
GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS
Sbjct: 181 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 240
Query: 320 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 379
PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF
Sbjct: 241 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 300
Query: 380 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 439
ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY
Sbjct: 301 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 360
Query: 440 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 499
RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL
Sbjct: 361 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 420
Query: 500 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 559
KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS
Sbjct: 421 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 480
Query: 560 QPQPFSAQGDMEENIIIEDYESDGT 584
QPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 481 QPQPFSAQGDMEENIIIEDYESDGT 505
>gi|18426904 Werner helicase interacting protein isoform 2 [Homo
sapiens]
Length = 640
Score = 38.1 bits (87), Expect = 0.023
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 36 LLITGPPGCGKTTTLKIL---SKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPY 92
L++ GPPGCGKTT I+ SK+H I+ ++ + + +D + + + F
Sbjct: 264 LILWGPPGCGKTTLAHIIASNSKKHSIR---FVTLSATNAKTNDVRDVIKQAQNEKSFFK 320
Query: 93 QSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLP 132
+ I F+ ++NK Q + L + ++I++E LP
Sbjct: 321 RKTIL----FIDEIHRFNKSQQVNAALLSRCRVIVLEKLP 356
>gi|31377644 ATPase family, AAA domain containing 1 [Homo sapiens]
Length = 361
Score = 33.5 bits (75), Expect = 0.56
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 28 QPKQGGSILLITGPPGCGKTTTLKILSKEHG 58
QP +G +L+ GPPGCGKT K +KE G
Sbjct: 124 QPPKG---VLLYGPPGCGKTLIAKATAKEAG 151
>gi|18426902 Werner helicase interacting protein isoform 1 [Homo
sapiens]
Length = 665
Score = 33.1 bits (74), Expect = 0.73
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Query: 36 LLITGPPGCGKTTTLKIL---SKEHGIQ 60
L++ GPPGCGKTT I+ SK+H I+
Sbjct: 264 LILWGPPGCGKTTLAHIIASNSKKHSIR 291
>gi|27501458 CTF18, chromosome transmission fidelity factor 18
homolog [Homo sapiens]
Length = 975
Score = 33.1 bits (74), Expect = 0.73
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 27 RQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQE 63
++PKQ + L+ GPPG GKTT ++++ G V E
Sbjct: 363 QRPKQ--KVALLCGPPGLGKTTLAHVIARHAGYSVVE 397
Score = 33.1 bits (74), Expect = 0.73
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 195 PTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNL 254
PT+ + + R+ + + D L LC+ DIR+ IN+LQF S+G+ L
Sbjct: 512 PTLPSRLVQRLQEVSLRQG----MRADPGVLAALCEKTDNDIRACINTLQFLYSRGQREL 567
Query: 255 RPR 257
R
Sbjct: 568 SVR 570
>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
sapiens]
Length = 1911
Score = 32.7 bits (73), Expect = 0.95
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 27 RQPKQGGSI---LLITGPPGCGKTTTLKILSKEHGIQ 60
RQPK ++ ++I GPP GKTT K ++ E+G++
Sbjct: 1402 RQPKPKPTVPIRIIIVGPPKSGKTTVAKKITSEYGLK 1438
>gi|45643125 nuclear VCP-like isoform 2 [Homo sapiens]
Length = 750
Score = 32.7 bits (73), Expect = 0.95
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 36 LLITGPPGCGKTTTLKILSKEHGI 59
+L+ GPPGCGKT K ++ E G+
Sbjct: 512 VLLAGPPGCGKTLLAKAVANESGL 535
>gi|45643123 nuclear VCP-like isoform 1 [Homo sapiens]
Length = 856
Score = 32.7 bits (73), Expect = 0.95
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 36 LLITGPPGCGKTTTLKILSKEHGI 59
+L+ GPPGCGKT K ++ E G+
Sbjct: 618 VLLAGPPGCGKTLLAKAVANESGL 641
>gi|157671927 spermatogenesis associated 5 [Homo sapiens]
Length = 893
Score = 32.3 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Query: 28 QPKQGGSILLITGPPGCGKTTTLKILSKEHGI 59
QP +G +L+ GPPGC KT K L+ E G+
Sbjct: 659 QPPKG---VLLYGPPGCSKTMIAKALANESGL 687
>gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]
Length = 980
Score = 32.0 bits (71), Expect = 1.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 32 GGSILLITGPPGCGKTTTLKILSKEHGIQV 61
G S +L+ GPPGCGKTT + G+ +
Sbjct: 462 GTSSVLLRGPPGCGKTTVVAAACSHLGLHL 491
>gi|9945308 ATP-binding cassette, sub-family D, member 2 [Homo
sapiens]
Length = 740
Score = 32.0 bits (71), Expect = 1.6
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 33 GSILLITGPPGCGKTTTLKILS 54
G LLITGP GCGK++ +ILS
Sbjct: 504 GMHLLITGPNGCGKSSLFRILS 525
>gi|110349788 absent, small, or homeotic 1-like [Homo sapiens]
Length = 2964
Score = 32.0 bits (71), Expect = 1.6
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 2 NQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQV 61
N ++ KK ++ V LKA+ L+RQ + G + + PG + L+ + Q
Sbjct: 1812 NYDKILATKKNLDHVNKILKAKKLQRQARTGNN--FVKRRPGRPRKCPLQAVVSMQAFQA 1869
Query: 62 QEWINPVL 69
+++NP L
Sbjct: 1870 AQFVNPEL 1877
>gi|32528306 replication factor C large subunit [Homo sapiens]
Length = 1147
Score = 31.2 bits (69), Expect = 2.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 37 LITGPPGCGKTTTLKILSKEHGIQVQE 63
L++GPPG GKTTT ++ +E G E
Sbjct: 647 LLSGPPGVGKTTTASLVCQELGYSYVE 673
>gi|4506753 RuvB-like 1 [Homo sapiens]
Length = 456
Score = 31.2 bits (69), Expect = 2.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 25 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQV 61
L + K G +L+ GPPG GKT +++E G +V
Sbjct: 55 LIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKV 91
>gi|226874831 guanylate kinase 1 isoform a [Homo sapiens]
Length = 218
Score = 31.2 bits (69), Expect = 2.8
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 20 LKAQVLERQPKQGGS---ILLITGPPGCGKTTTLKILSKEH 57
L A L R P G S ++++GP G GK+T LK L +EH
Sbjct: 9 LAAAALGRAPPDGMSGPRPVVLSGPSGAGKSTLLKRLLQEH 49
>gi|46255039 RAD51-like 1 isoform 3 [Homo sapiens]
Length = 384
Score = 30.8 bits (68), Expect = 3.6
Identities = 12/15 (80%), Positives = 13/15 (86%)
Query: 33 GSILLITGPPGCGKT 47
GS+ ITGPPGCGKT
Sbjct: 101 GSLTEITGPPGCGKT 115
>gi|19924117 RAD51-like 1 isoform 2 [Homo sapiens]
Length = 350
Score = 30.8 bits (68), Expect = 3.6
Identities = 12/15 (80%), Positives = 13/15 (86%)
Query: 33 GSILLITGPPGCGKT 47
GS+ ITGPPGCGKT
Sbjct: 101 GSLTEITGPPGCGKT 115
>gi|10835029 RAD51-like 1 isoform 1 [Homo sapiens]
Length = 350
Score = 30.8 bits (68), Expect = 3.6
Identities = 12/15 (80%), Positives = 13/15 (86%)
Query: 33 GSILLITGPPGCGKT 47
GS+ ITGPPGCGKT
Sbjct: 101 GSLTEITGPPGCGKT 115
>gi|4502703 cell division cycle 6 protein [Homo sapiens]
Length = 560
Score = 30.8 bits (68), Expect = 3.6
Identities = 52/243 (21%), Positives = 104/243 (42%), Gaps = 29/243 (11%)
Query: 6 LAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWI 65
L +++++ + +L+ + K+ GS+ L +G PG GKT L ++ + +
Sbjct: 172 LPAREREMDVIRNFLREHICG---KKAGSLYL-SGAPGTGKTACLS--------RILQDL 219
Query: 66 NPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDK-- 123
L F K + ++ +FP +Q + +E + R + ++ L + +K
Sbjct: 220 KKELKGF-KTIMLNCMSLRTAQAVFPAIAQ-EICQEEVSRPAGKDMMRKLEKHMTAEKGP 277
Query: 124 KIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFI-ISDSLSGDNNQRLLFPKEIQEE 182
I+LV D +Q + L ++ + L+ I I+++L D R+L + +E+
Sbjct: 278 MIVLVLDEMDQLDSKGQDVLYTLFEWPWLSNSHLVLIGIANTL--DLTDRILPRLQAREK 335
Query: 183 CSISNISFNPVA----PTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRS 238
C ++F P TI+ LN++ + N K S SGD+R
Sbjct: 336 CKPQLLNFPPYTRNQIVTILQDRLNQVSRDQVLDNAAVQFCARKVS------AVSGDVRK 389
Query: 239 AIN 241
A++
Sbjct: 390 ALD 392
>gi|31795544 origin recognition complex, subunit 1 [Homo sapiens]
Length = 861
Score = 30.8 bits (68), Expect = 3.6
Identities = 29/134 (21%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 6 LAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLK--ILSKEHGIQVQE 63
L +++ +++ ++++++L+ G + I+G PG GKT T+ I + Q +
Sbjct: 504 LPCREQEFQDIYNFVESKLLDHT----GGCMYISGVPGTGKTATVHEVIRCLQQAAQAND 559
Query: 64 WINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFL-LRATKYNKLQMLGDDLRT- 121
+P FQ + GM TE P+Q + + ++ +AT + ++L T
Sbjct: 560 -----VPPFQYIEVNGMKLTE------PHQVYVQILQKLTGQKATANHAAELLAKQFCTR 608
Query: 122 ----DKKIILVEDL 131
+ ++LV++L
Sbjct: 609 GSPQETTVLLVDEL 622
>gi|32455236 helicase (DNA) B [Homo sapiens]
Length = 1087
Score = 30.8 bits (68), Expect = 3.6
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 35 ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS 94
+ +I+G GCGKTT + L K + + DF++D N + F QS
Sbjct: 470 VTVISGKGGCGKTTIVSRLFKHIEQLEEREVKKACEDFEQDQ-----NASEEWITFTEQS 524
Query: 95 QIAVFK--EFLLRA 106
Q+ K E LL A
Sbjct: 525 QLEADKAIEVLLTA 538
>gi|7262393 ATP-binding cassette, sub-family D (ALD), member 1 [Homo
sapiens]
Length = 745
Score = 30.4 bits (67), Expect = 4.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 33 GSILLITGPPGCGKTTTLKIL 53
G LLITGP GCGK++ +IL
Sbjct: 500 GMHLLITGPNGCGKSSLFRIL 520
>gi|40806173 spastic paraplegia 7 isoform 2 [Homo sapiens]
Length = 489
Score = 30.4 bits (67), Expect = 4.7
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 8 VHKKKIE--EVETWLKAQVLERQPKQGGSI---LLITGPPGCGKTTTLKILSKE 56
+H+ K+E E +LK+ ER + G + L+ GPPGCGKT K ++ E
Sbjct: 314 MHEAKLEVREFVDYLKSP--ERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 365
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,393,966
Number of Sequences: 37866
Number of extensions: 1003045
Number of successful extensions: 3224
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3180
Number of HSP's gapped (non-prelim): 56
length of query: 584
length of database: 18,247,518
effective HSP length: 108
effective length of query: 476
effective length of database: 14,157,990
effective search space: 6739203240
effective search space used: 6739203240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.