Guide to the Human Genome
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Name: CDC6 Sequence: fasta or formatted (560aa) NCBI GI: 4502703
Description:

cell division cycle 6 protein

Referenced in:

Additional Cell Cycle Functions
Replication Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         36           2
 C cysteine            3.0         17           1
 D aspartate           4.3         24           2
 E glutamate           6.1         34           2
 F phenylalanine       2.1         12           2
 G glycine             4.5         25           1
 H histidine           1.6          9           1
 I isoleucine          5.5         31           1
 K lysine              9.5         53           2
 L leucine            12.5         70           2
 M methionine          2.0         11           2
 N asparagine          3.8         21           1
 P proline             5.7         32           2
 Q glutamine           6.2         35           2
 R arginine            6.8         38           2
 S serine              7.3         41           2
 T threonine           5.0         28           2
 V valine              6.2         35           1
 W tryptophan          0.4          2           1
 Y tyrosine            1.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell division cycle 6 protein 
ORC1L                 0.135   origin recognition complex, subunit 1 
BAT2D1                0.016   HBxAg transactivated protein 2 
RFC5                  0.011   replication factor C 5 isoform 2 
RFC5                  0.011   replication factor C 5 isoform 2 
RFC5                  0.011   replication factor C 5 isoform 1 
RFC2                  0.011   replication factor C 2 isoform 1 
ORC4L                 0.011   origin recognition complex subunit 4 
ORC4L                 0.011   origin recognition complex subunit 4 
ORC4L                 0.011   origin recognition complex subunit 4 
NWD1                  0.010   NACHT and WD repeat domain containing 1 
CAP2                  0.009   adenylyl cyclase-associated protein 2 
RFC1                  0.006   replication factor C large subunit 
KIF3B                 0.006   kinesin family member 3B 
BAG3                  0.006   BCL2-associated athanogene 3 
RFC4                  0.006   replication factor C 4 
RFC4                  0.006   replication factor C 4 
NLRP8                 0.006   NLR family, pyrin domain containing 8 
ATAD3B                0.006   AAA-ATPase  TOB3 
CCDC40                0.006   coiled-coil domain containing 40 
BPTF                  0.006   bromodomain PHD finger transcription factor isoform ...
KSR2                  0.006   kinase suppressor of ras 2 
RAD17                 0.006   RAD17 homolog isoform 1 
RAD17                 0.006   RAD17 homolog isoform 1 
RAD17                 0.006   RAD17 homolog isoform 1 
RAD17                 0.006   RAD17 homolog isoform 1 
RAD17                 0.006   RAD17 homolog isoform 1 
RAD17                 0.006   RAD17 homolog isoform 2 
FCRL6                 0.006   Fc receptor-like 6 
FAM164A               0.006   hypothetical protein LOC51101 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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