Guide to the Human Genome
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Name: RAD17 Sequence: fasta or formatted (670aa) NCBI GI: 19718784
Description:

RAD17 homolog isoform 1

Referenced in:

DNases, Recombination, and DNA Repair
Replication Proteins

Other entries for this name:
alt prot [681aa] RAD17 homolog isoform 2
alt prot [505aa] RAD17 homolog isoform 3
alt prot [584aa] RAD17 homolog isoform 4
alt mRNA [670aa] RAD17 homolog isoform 1
alt mRNA [670aa] RAD17 homolog isoform 1
alt mRNA [670aa] RAD17 homolog isoform 1
alt mRNA [670aa] RAD17 homolog isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         31           2
 C cysteine            1.6         11           1
 D aspartate           5.5         37           2
 E glutamate           7.5         50           2
 F phenylalanine       4.6         31           2
 G glycine             6.0         40           3
 H histidine           2.4         16           1
 I isoleucine          6.0         40           3
 K lysine              6.6         44           3
 L leucine            11.0         74           2
 M methionine          2.2         15           2
 N asparagine          4.8         32           2
 P proline             5.5         37           2
 Q glutamine           4.9         33           1
 R arginine            5.4         36           2
 S serine              9.3         62           3
 T threonine           4.6         31           3
 V valine              4.0         27           2
 W tryptophan          1.0          7           1
 Y tyrosine            2.4         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAD17 homolog isoform 1 
RAD17                 1.000   RAD17 homolog isoform 1 
RAD17                 1.000   RAD17 homolog isoform 1 
RAD17                 1.000   RAD17 homolog isoform 1 
RAD17                 1.000   RAD17 homolog isoform 1 
RAD17                 0.995   RAD17 homolog isoform 2 
RAD17                 0.864   RAD17 homolog isoform 4 
RAD17                 0.745   RAD17 homolog isoform 3 
RFC5                  0.022   replication factor C 5 isoform 1 
ATAD5                 0.020   ATPase family, AAA domain containing 5 
RFC5                  0.016   replication factor C 5 isoform 2 
RFC5                  0.016   replication factor C 5 isoform 2 
RFC1                  0.015   replication factor C large subunit 
RFC2                  0.013   replication factor C 2 isoform 1 
WRNIP1                0.012   Werner helicase interacting protein isoform 2 
RFC4                  0.011   replication factor C 4 
RFC4                  0.011   replication factor C 4 
RFC2                  0.011   replication factor C 2 isoform 2 
RFC3                  0.011   replication factor C 3 isoform 2 
RFC3                  0.011   replication factor C 3 isoform 1 
WRNIP1                0.008   Werner helicase interacting protein isoform 1 
CENPF                 0.008   centromere protein F 
ATAD1                 0.006   ATPase family, AAA domain containing 1 
CHTF18                0.006   CTF18, chromosome transmission fidelity factor 18 ho...
AKD1                  0.006   adenylate kinase domain containing 1 isoform 1 [Hom...
NVL                   0.006   nuclear VCP-like isoform 2 
NVL                   0.006   nuclear VCP-like isoform 1 
SPATA5                0.005   spermatogenesis associated 5 
PEX6                  0.005   peroxisomal biogenesis factor 6 
ABCD2                 0.005   ATP-binding cassette, sub-family D, member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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