Guide to the Human Genome
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Name: TMEM201 Sequence: fasta or formatted (392aa) NCBI GI: 58197554
Description:

transmembrane protein 201 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {642aa} transmembrane protein 201 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         45           3
 C cysteine            4.6         18           2
 D aspartate           2.3          9           1
 E glutamate           4.6         18           2
 F phenylalanine       3.3         13           1
 G glycine             6.9         27           2
 H histidine           4.1         16           2
 I isoleucine          1.8          7           1
 K lysine              3.3         13           1
 L leucine            13.3         52           3
 M methionine          1.5          6           1
 N asparagine          3.3         13           1
 P proline             5.9         23           2
 Q glutamine           6.1         24           2
 R arginine            6.9         27           2
 S serine              4.8         19           2
 T threonine           6.1         24           2
 V valine              5.1         20           2
 W tryptophan          1.8          7           1
 Y tyrosine            2.8         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 201 isoform 2 
TMEM201               0.987   transmembrane protein 201 isoform 1 
SLK                   0.013   serine/threonine kinase 2 
ABCB9                 0.009   ATP-binding cassette, sub-family B (MDR/TAP), member ...
ABCB9                 0.009   ATP-binding cassette, sub-family B (MDR/TAP), member ...
ABCB9                 0.009   ATP-binding cassette, sub-family B (MDR/TAP), member...
TRIO                  0.009   triple functional domain (PTPRF interacting) 
STK10                 0.009   serine/threonine kinase 10 
WISP2                 0.008   WNT1 inducible signaling pathway protein 2 precursor ...
GTF3C1                0.008   general transcription factor IIIC, polypeptide 1, a...
THAP11                0.006   THAP domain containing 11 
COIL                  0.006   coilin 
AMN                   0.006   amnionless protein precursor 
HECTD1                0.006   HECT domain containing 1 
LOC100129203          0.005   PREDICTED: similar to mCG50504 
CHST12                0.005   carbohydrate sulfotransferase 12 
ADCY6                 0.005   adenylate cyclase 6 isoform a 
ADCY6                 0.005   adenylate cyclase 6 isoform b 
GOLGA4                0.005   golgi autoantigen, golgin subfamily a, 4 
FAM57B                0.005   hypothetical protein LOC83723 
GPR132                0.005   G protein-coupled receptor 132 
C3orf45               0.005   hypothetical protein LOC132228 
SYNC                  0.005   syncoilin, intermediate filament 1 isoform 2 
SYNC                  0.005   syncoilin, intermediate filament 1 isoform 1 
NR1H3                 0.005   nuclear receptor subfamily 1, group H, member 3 iso...
NR1H3                 0.005   nuclear receptor subfamily 1, group H, member 3 iso...
NR1H3                 0.005   nuclear receptor subfamily 1, group H, member 3 iso...
C9orf100              0.005   hypothetical protein LOC84904 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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