Guide to the Human Genome
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Name: ZNF649 Sequence: fasta or formatted (505aa) NCBI GI: 21362078
Description:

zinc finger protein 649

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         25           1
 C cysteine            4.8         24           1
 D aspartate           3.0         15           2
 E glutamate           8.5         43           2
 F phenylalanine       3.4         17           1
 G glycine             7.1         36           1
 H histidine           7.5         38           2
 I isoleucine          3.4         17           1
 K lysine              9.9         50           2
 L leucine             6.9         35           2
 M methionine          1.4          7           1
 N asparagine          2.4         12           1
 P proline             5.0         25           1
 Q glutamine           5.5         28           2
 R arginine            5.5         28           2
 S serine              6.9         35           1
 T threonine           6.1         31           1
 V valine              3.8         19           2
 W tryptophan          0.6          3           1
 Y tyrosine            3.4         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 649 
ZNF613                0.581   zinc finger protein 613 isoform 1 
ZNF613                0.522   zinc finger protein 613 isoform 2 
ZNF615                0.508   zinc finger protein 615 
ZNF432                0.507   zinc finger protein 432 
ZNF350                0.472   zinc finger protein 350 
ZNF614                0.454   zinc finger protein 614 
LOC100287429          0.427   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.427   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.427   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.427   zinc finger protein 84 
ZNF84                 0.427   zinc finger protein 84 
ZNF26                 0.407   zinc finger protein 26 
ZNF268                0.406   zinc finger protein 268 
ZNF569                0.389   zinc finger protein 569 
ZNF25                 0.389   zinc finger protein 25 
ZNF157                0.381   zinc finger protein 157 
LOC100287515          0.379   PREDICTED: hypothetical protein XP_002343928 
ZNF182                0.373   zinc finger protein 21 isoform 2 
ZNF565                0.372   zinc finger protein 565 
ZNF565                0.372   zinc finger protein 565 
ZNF383                0.371   zinc finger protein 383 
ZNF184                0.371   zinc finger protein 184 
ZNF182                0.370   zinc finger protein 21 isoform 1 
ZNF420                0.361   zinc finger protein 420 
ZNF135                0.361   zinc finger protein 135 
ZNF12                 0.359   zinc finger protein 12 isoform b 
ZNF582                0.358   zinc finger protein 582 
ZNF41                 0.357   zinc finger protein 41 
ZNF41                 0.357   zinc finger protein 41 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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