Guide to the Human Genome
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Search of human proteins with 194473720

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|194473720 upstream of NRAS isoform 3 [Homo sapiens]
         (813 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|194473720 upstream of NRAS isoform 3 [Homo sapiens]               1631   0.0  
gi|56117850 upstream of NRAS isoform 2 [Homo sapiens]                1541   0.0  
gi|56117852 upstream of NRAS isoform 1 [Homo sapiens]                1524   0.0  
gi|221219026 pleckstrin homology-like domain, family B, member 1...    37   0.096
gi|221219024 pleckstrin homology-like domain, family B, member 1...    35   0.21 
gi|38424073 pleckstrin homology-like domain, family B, member 1 ...    35   0.21 
gi|109715854 calcium-regulated heat-stable protein 1 [Homo sapiens]    34   0.62 
gi|109715858 calcium-regulated heat-stable protein 1 [Homo sapiens]    34   0.62 
gi|38016943 calcium release-activated calcium channel protein 1 ...    33   0.81 
gi|54792100 erbB-3 isoform 1 precursor [Homo sapiens]                  33   1.1  
gi|205360923 mucin 15 isoform a [Homo sapiens]                         33   1.4  
gi|40255098 mucin 15 isoform b [Homo sapiens]                          33   1.4  
gi|153792780 additional sex combs like 2 [Homo sapiens]                33   1.4  
gi|153792536 ATPase family, AAA domain containing 2B [Homo sapiens]    32   3.1  
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    31   4.0  
gi|156415990 Y box binding protein 2 [Homo sapiens]                    31   4.0  
gi|56549696 E1A binding protein p400 [Homo sapiens]                    31   4.0  
gi|110349721 titin isoform novex-3 [Homo sapiens]                      30   6.9  
gi|34098946 nuclease sensitive element binding protein 1 [Homo s...    30   6.9  
gi|224586884 cold shock domain protein A isoform b [Homo sapiens]      30   6.9  
gi|224586882 cold shock domain protein A isoform a [Homo sapiens]      30   6.9  
gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo ...    30   6.9  
gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo ...    30   6.9  
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    30   9.0  
gi|148886692 FAT tumor suppressor homolog 3 [Homo sapiens]             30   9.0  

>gi|194473720 upstream of NRAS isoform 3 [Homo sapiens]
          Length = 813

 Score = 1631 bits (4223), Expect = 0.0
 Identities = 813/813 (100%), Positives = 813/813 (100%)

Query: 1   MENVFTVSSDPHPSPAAPPSLSLPLSSSSTSSGTKKQKRTPTYQRSMSFDPNLLHNNGHN 60
           MENVFTVSSDPHPSPAAPPSLSLPLSSSSTSSGTKKQKRTPTYQRSMSFDPNLLHNNGHN
Sbjct: 1   MENVFTVSSDPHPSPAAPPSLSLPLSSSSTSSGTKKQKRTPTYQRSMSFDPNLLHNNGHN 60

Query: 61  GYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVS 120
           GYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVS
Sbjct: 61  GYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVS 120

Query: 121 SDRRTGKPIAVKLVKIKQEILPEERMNGQEVFYLTYTPEDVEGNVQLETGDKINFVIDNN 180
           SDRRTGKPIAVKLVKIKQEILPEERMNGQEVFYLTYTPEDVEGNVQLETGDKINFVIDNN
Sbjct: 121 SDRRTGKPIAVKLVKIKQEILPEERMNGQEVFYLTYTPEDVEGNVQLETGDKINFVIDNN 180

Query: 181 KHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQP 240
           KHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQP
Sbjct: 181 KHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQP 240

Query: 241 GDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPG 300
           GDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPG
Sbjct: 241 GDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPG 300

Query: 301 RIKVDFVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTN 360
           RIKVDFVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTN
Sbjct: 301 RIKVDFVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTN 360

Query: 361 EAREMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRN 420
           EAREMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRN
Sbjct: 361 EAREMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRN 420

Query: 421 HAIRIKKLPKGTVSFHSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCG 480
           HAIRIKKLPKGTVSFHSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCG
Sbjct: 421 HAIRIKKLPKGTVSFHSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCG 480

Query: 481 VKLTIAFQAKDVEGSTSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVAT 540
           VKLTIAFQAKDVEGSTSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVAT
Sbjct: 481 VKLTIAFQAKDVEGSTSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVAT 540

Query: 541 LKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSV 600
           LKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSV
Sbjct: 541 LKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSV 600

Query: 601 NGITEEADPTIYSGKVIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDC 660
           NGITEEADPTIYSGKVIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDC
Sbjct: 601 NGITEEADPTIYSGKVIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDC 660

Query: 661 LQKGESVKFQLCVLGQNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEV 720
           LQKGESVKFQLCVLGQNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEV
Sbjct: 661 LQKGESVKFQLCVLGQNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEV 720

Query: 721 QDGIELQAGDEVEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDA 780
           QDGIELQAGDEVEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDA
Sbjct: 721 QDGIELQAGDEVEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDA 780

Query: 781 SAPRLMVLRQPRGPDNSMGFGAERKIRQAGVID 813
           SAPRLMVLRQPRGPDNSMGFGAERKIRQAGVID
Sbjct: 781 SAPRLMVLRQPRGPDNSMGFGAERKIRQAGVID 813


>gi|56117850 upstream of NRAS isoform 2 [Homo sapiens]
          Length = 767

 Score = 1541 bits (3989), Expect = 0.0
 Identities = 767/767 (100%), Positives = 767/767 (100%)

Query: 47  MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL 106
           MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL
Sbjct: 1   MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL 60

Query: 107 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQEVFYLTYTPEDVEGNVQ 166
           QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQEVFYLTYTPEDVEGNVQ
Sbjct: 61  QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQEVFYLTYTPEDVEGNVQ 120

Query: 167 LETGDKINFVIDNNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFF 226
           LETGDKINFVIDNNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFF
Sbjct: 121 LETGDKINFVIDNNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFF 180

Query: 227 HYSEFKGDLETLQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVI 286
           HYSEFKGDLETLQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVI
Sbjct: 181 HYSEFKGDLETLQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVI 240

Query: 287 PKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRRDKLERA 346
           PKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRRDKLERA
Sbjct: 241 PKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRRDKLERA 300

Query: 347 TNIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLHIADEV 406
           TNIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLHIADEV
Sbjct: 301 TNIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLHIADEV 360

Query: 407 EFTVVPDMLSAQRNHAIRIKKLPKGTVSFHSHSDHRFLGTVEKEATFSNPKTTSPNKGKE 466
           EFTVVPDMLSAQRNHAIRIKKLPKGTVSFHSHSDHRFLGTVEKEATFSNPKTTSPNKGKE
Sbjct: 361 EFTVVPDMLSAQRNHAIRIKKLPKGTVSFHSHSDHRFLGTVEKEATFSNPKTTSPNKGKE 420

Query: 467 KEAEDGIIAYDDCGVKLTIAFQAKDVEGSTSPQIGDKVEFSISDKQRPGQQVATCVRLLG 526
           KEAEDGIIAYDDCGVKLTIAFQAKDVEGSTSPQIGDKVEFSISDKQRPGQQVATCVRLLG
Sbjct: 421 KEAEDGIIAYDDCGVKLTIAFQAKDVEGSTSPQIGDKVEFSISDKQRPGQQVATCVRLLG 480

Query: 527 RNSNSKRLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKG 586
           RNSNSKRLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKG
Sbjct: 481 RNSNSKRLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKG 540

Query: 587 NKVSAEKVNKTHSVNGITEEADPTIYSGKVIRPLRSVDPTQTEYQGMIEIVEEGDMKGEV 646
           NKVSAEKVNKTHSVNGITEEADPTIYSGKVIRPLRSVDPTQTEYQGMIEIVEEGDMKGEV
Sbjct: 541 NKVSAEKVNKTHSVNGITEEADPTIYSGKVIRPLRSVDPTQTEYQGMIEIVEEGDMKGEV 600

Query: 647 YPFGIVGMANKGDCLQKGESVKFQLCVLGQNAQTMAYNITPLRRATVECVKDQFGFINYE 706
           YPFGIVGMANKGDCLQKGESVKFQLCVLGQNAQTMAYNITPLRRATVECVKDQFGFINYE
Sbjct: 601 YPFGIVGMANKGDCLQKGESVKFQLCVLGQNAQTMAYNITPLRRATVECVKDQFGFINYE 660

Query: 707 VGDSKKLFFHVKEVQDGIELQAGDEVEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPD 766
           VGDSKKLFFHVKEVQDGIELQAGDEVEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPD
Sbjct: 661 VGDSKKLFFHVKEVQDGIELQAGDEVEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPD 720

Query: 767 RLVNRLKNITLDDASAPRLMVLRQPRGPDNSMGFGAERKIRQAGVID 813
           RLVNRLKNITLDDASAPRLMVLRQPRGPDNSMGFGAERKIRQAGVID
Sbjct: 721 RLVNRLKNITLDDASAPRLMVLRQPRGPDNSMGFGAERKIRQAGVID 767


>gi|56117852 upstream of NRAS isoform 1 [Homo sapiens]
          Length = 798

 Score = 1524 bits (3947), Expect = 0.0
 Identities = 767/798 (96%), Positives = 767/798 (96%), Gaps = 31/798 (3%)

Query: 47  MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL 106
           MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL
Sbjct: 1   MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL 60

Query: 107 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQ----------------- 149
           QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQ                 
Sbjct: 61  QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQVVCAVPHNLESKSPAAP 120

Query: 150 --------------EVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK 195
                         EVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK
Sbjct: 121 GQSPTGSVCYERNGEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK 180

Query: 196 KKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE 255
           KKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE
Sbjct: 181 KKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE 240

Query: 256 VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG 315
           VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG
Sbjct: 241 VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG 300

Query: 316 DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF 375
           DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF
Sbjct: 301 DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF 360

Query: 376 GFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF 435
           GFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF
Sbjct: 361 GFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF 420

Query: 436 HSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGS 495
           HSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGS
Sbjct: 421 HSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGS 480

Query: 496 TSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK 555
           TSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK
Sbjct: 481 TSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK 540

Query: 556 EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGK 615
           EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGK
Sbjct: 541 EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGK 600

Query: 616 VIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG 675
           VIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG
Sbjct: 601 VIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG 660

Query: 676 QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS 735
           QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS
Sbjct: 661 QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS 720

Query: 736 VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD 795
           VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD
Sbjct: 721 VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD 780

Query: 796 NSMGFGAERKIRQAGVID 813
           NSMGFGAERKIRQAGVID
Sbjct: 781 NSMGFGAERKIRQAGVID 798


>gi|221219026 pleckstrin homology-like domain, family B, member 1
            isoform b [Homo sapiens]
          Length = 1319

 Score = 36.6 bits (83), Expect = 0.096
 Identities = 28/94 (29%), Positives = 38/94 (40%)

Query: 1    MENVFTVSSDPHPSPAAPPSLSLPLSSSSTSSGTKKQKRTPTYQRSMSFDPNLLHNNGHN 60
            ++ V+    D   +   P + S PL SSS SS +  Q    T  RS S    LL  NG  
Sbjct: 910  LKEVYRSKMDGEATSPLPRTRSGPLPSSSGSSSSSSQLSVATLGRSPSPKSALLTQNGTG 969

Query: 61   GYPNGTSAALRETGVIEKLLTSYGFIQCSERQAR 94
              P   +A L++     +L       Q  E Q R
Sbjct: 970  SLPRNLAATLQDIETKRQLALQQKGQQVIEEQRR 1003


>gi|221219024 pleckstrin homology-like domain, family B, member 1
            isoform a [Homo sapiens]
          Length = 1377

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 28/91 (30%), Positives = 36/91 (39%)

Query: 4    VFTVSSDPHPSPAAPPSLSLPLSSSSTSSGTKKQKRTPTYQRSMSFDPNLLHNNGHNGYP 63
            V+    D   +   P + S PL SSS SS +  Q    T  RS S    LL  NG    P
Sbjct: 960  VYRSKMDGEATSPLPRTRSGPLPSSSGSSSSSSQLSVATLGRSPSPKSALLTQNGTGSLP 1019

Query: 64   NGTSAALRETGVIEKLLTSYGFIQCSERQAR 94
               +A L++     +L       Q  E Q R
Sbjct: 1020 RNLAATLQDIETKRQLALQQKGQQVIEEQRR 1050


>gi|38424073 pleckstrin homology-like domain, family B, member 1
            isoform a [Homo sapiens]
          Length = 1377

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 28/91 (30%), Positives = 36/91 (39%)

Query: 4    VFTVSSDPHPSPAAPPSLSLPLSSSSTSSGTKKQKRTPTYQRSMSFDPNLLHNNGHNGYP 63
            V+    D   +   P + S PL SSS SS +  Q    T  RS S    LL  NG    P
Sbjct: 960  VYRSKMDGEATSPLPRTRSGPLPSSSGSSSSSSQLSVATLGRSPSPKSALLTQNGTGSLP 1019

Query: 64   NGTSAALRETGVIEKLLTSYGFIQCSERQAR 94
               +A L++     +L       Q  E Q R
Sbjct: 1020 RNLAATLQDIETKRQLALQQKGQQVIEEQRR 1050


>gi|109715854 calcium-regulated heat-stable protein 1 [Homo sapiens]
          Length = 147

 Score = 33.9 bits (76), Expect = 0.62
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 546 GFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSK--GKGNKVSAEKVNKTHSVNGI 603
           GFI  A+   +IF H S+  G+   +E GD V Y +     K  K+ A +V  TH   G 
Sbjct: 77  GFITPADGGPDIFLHISDVEGEYVPVE-GDEVTYKMCSIPPKNEKLQAVEVVITHLAPGT 135

Query: 604 TEEADPTIYSGKVI 617
             E     +SG VI
Sbjct: 136 KHET----WSGHVI 145


>gi|109715858 calcium-regulated heat-stable protein 1 [Homo sapiens]
          Length = 147

 Score = 33.9 bits (76), Expect = 0.62
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 546 GFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSK--GKGNKVSAEKVNKTHSVNGI 603
           GFI  A+   +IF H S+  G+   +E GD V Y +     K  K+ A +V  TH   G 
Sbjct: 77  GFITPADGGPDIFLHISDVEGEYVPVE-GDEVTYKMCSIPPKNEKLQAVEVVITHLAPGT 135

Query: 604 TEEADPTIYSGKVI 617
             E     +SG VI
Sbjct: 136 KHET----WSGHVI 145


>gi|38016943 calcium release-activated calcium channel protein 1
          [Homo sapiens]
          Length = 301

 Score = 33.5 bits (75), Expect = 0.81
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 3/31 (9%)

Query: 12 HPSPAAPPSLS---LPLSSSSTSSGTKKQKR 39
          HP PA PPS S   LP S  ST+SG+++ +R
Sbjct: 2  HPEPAPPPSRSSPELPPSGGSTTSGSRRSRR 32


>gi|54792100 erbB-3 isoform 1 precursor [Homo sapiens]
          Length = 1342

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 614 GKVIRPLRSVDPTQTEYQGMIEIVEEGDM-KGEVYPFGIVGMANKGDCLQKGESVKFQLC 672
           G+ I PL   DP++   + +  I +E ++ K +V   G+ G  +KG  + +GES+K  +C
Sbjct: 684 GESIEPL---DPSEKANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVC 740

Query: 673 V 673
           +
Sbjct: 741 I 741


>gi|205360923 mucin 15 isoform a [Homo sapiens]
          Length = 361

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 15/112 (13%)

Query: 4   VFTVSSDPHPSPAAPPSLSLPLSSSSTSSGTKKQKRTPTYQRSMSFDPNLLHNNGHNGYP 63
           V  +SS+P  SP+  P +  P S   T++       TP YQ   +  P L   N    +P
Sbjct: 195 VSILSSEP-TSPSVTPLIVEP-SGWLTTNSDSFTGFTP-YQEKTTLQPTLKFTNNSKLFP 251

Query: 64  NGTSAAL--RETGVI----------EKLLTSYGFIQCSERQARLFFHCSQYN 103
           N +      R TG++            LLT  G++ C +R+   F H   Y+
Sbjct: 252 NTSDPQKENRNTGIVFGAILGAILGVSLLTLVGYLLCGKRKTDSFSHRRLYD 303


>gi|40255098 mucin 15 isoform b [Homo sapiens]
          Length = 334

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 15/112 (13%)

Query: 4   VFTVSSDPHPSPAAPPSLSLPLSSSSTSSGTKKQKRTPTYQRSMSFDPNLLHNNGHNGYP 63
           V  +SS+P  SP+  P +  P S   T++       TP YQ   +  P L   N    +P
Sbjct: 168 VSILSSEP-TSPSVTPLIVEP-SGWLTTNSDSFTGFTP-YQEKTTLQPTLKFTNNSKLFP 224

Query: 64  NGTSAAL--RETGVI----------EKLLTSYGFIQCSERQARLFFHCSQYN 103
           N +      R TG++            LLT  G++ C +R+   F H   Y+
Sbjct: 225 NTSDPQKENRNTGIVFGAILGAILGVSLLTLVGYLLCGKRKTDSFSHRRLYD 276


>gi|153792780 additional sex combs like 2 [Homo sapiens]
          Length = 1435

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 17/46 (36%), Positives = 25/46 (54%)

Query: 7   VSSDPHPSPAAPPSLSLPLSSSSTSSGTKKQKRTPTYQRSMSFDPN 52
           VS+   P+ +APPS +LP +SS  + GT      PT + + S   N
Sbjct: 904 VSATTAPAGSAPPSSTLPAASSLKTPGTSLNMNGPTLRPTSSIPAN 949


>gi|153792536 ATPase family, AAA domain containing 2B [Homo sapiens]
          Length = 1458

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 9   SDPHPSPAAPPSLSLPLS-----SSSTSSGTKKQKRTPTYQRSMSFDPNLLHNNGHNG 61
           SD H SP A  +L  P S     S S S+G +++    T Q  ++  P     NGH+G
Sbjct: 81  SDSHVSPPAKRTLKQPDSVCKDKSKSRSTGQREEWNLSTGQARLTSQPGATLPNGHSG 138


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 31.2 bits (69), Expect = 4.0
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 6   TVSSDPHPSPAAPPSL-SLPLSSSSTSSGTKKQKRTPTYQRSMSFDPN 52
           T S    PSP+APPSL +LP   ++  S       +PT Q + SF P+
Sbjct: 297 TPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPS 344


>gi|156415990 Y box binding protein 2 [Homo sapiens]
          Length = 364

 Score = 31.2 bits (69), Expect = 4.0
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 208 MKEAFGFIERGDVVKEIFFHYSEFKGD-----LETLQPGDDVEFTIKDRNGKEVATDV 260
           ++  +GFI R D  +++F H +  K +     L ++  G+ VEF + +      AT+V
Sbjct: 103 VRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNV 160


>gi|56549696 E1A binding protein p400 [Homo sapiens]
          Length = 3122

 Score = 31.2 bits (69), Expect = 4.0
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 2    ENVFTVSSDPHPSPAAPPSLSLPLSSSSTSSGTKKQKRTP 41
            + V T +S P  +P AP    +P SS S S   K Q R P
Sbjct: 3070 QQVVTTASAPLQTPGAPNPAQVPASSDSPSQQPKLQMRVP 3109


>gi|110349721 titin isoform novex-3 [Homo sapiens]
          Length = 5604

 Score = 30.4 bits (67), Expect = 6.9
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 171  DKINFVIDNNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAF--GFIERGDVVKEIF 225
            D I +VI   K +  +  RN+ L      RC+ V C + EA   GF+  GD   EIF
Sbjct: 5423 DNIKYVISEEKGSHTLKIRNVCLSDSATYRCRAVNC-VGEAICRGFLTMGD--SEIF 5476


>gi|34098946 nuclease sensitive element binding protein 1 [Homo
           sapiens]
          Length = 324

 Score = 30.4 bits (67), Expect = 6.9
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%)

Query: 208 MKEAFGFIERGDVVKEIFFHYSEFKGD-----LETLQPGDDVEF-TIKDRNGKEVA 257
           ++  +GFI R D  +++F H +  K +     L ++  G+ VEF  ++   G E A
Sbjct: 68  VRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAA 123


>gi|224586884 cold shock domain protein A isoform b [Homo sapiens]
          Length = 303

 Score = 30.4 bits (67), Expect = 6.9
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%)

Query: 208 MKEAFGFIERGDVVKEIFFHYSEFKGD-----LETLQPGDDVEF-TIKDRNGKEVA 257
           ++  +GFI R D  +++F H +  K +     L ++  G+ VEF  ++   G E A
Sbjct: 100 VRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAA 155


>gi|224586882 cold shock domain protein A isoform a [Homo sapiens]
          Length = 372

 Score = 30.4 bits (67), Expect = 6.9
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%)

Query: 208 MKEAFGFIERGDVVKEIFFHYSEFKGD-----LETLQPGDDVEF-TIKDRNGKEVA 257
           ++  +GFI R D  +++F H +  K +     L ++  G+ VEF  ++   G E A
Sbjct: 100 VRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAA 155


>gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo
           sapiens]
          Length = 788

 Score = 30.4 bits (67), Expect = 6.9
 Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 17/154 (11%)

Query: 233 GDLETLQPGDDVE--FTIKDRNGKEVATDVRLLP--QGTVIFEDISIEHFEGTVTKVIPK 288
           GD   ++P   +E     KD +G E     +L+P  + T +  + S    +G  TKV   
Sbjct: 387 GDQTPIEPQTSIERLTETKDGSGLEEKVRAKLVPSQEETKLSVEESEAAGDGVDTKVAQG 446

Query: 289 VPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRR-DKLERAT 347
              K+  D      KV     +E    ++  K      EG+    +   D+  DK E   
Sbjct: 447 ATEKSPED------KVQIAANEETQEREEQMK------EGEETEGSEEDDKENDKTEEMP 494

Query: 348 NIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCV 381
           N  VL N     NE  E+G +    D     K +
Sbjct: 495 NDSVLENKSLQENEEEEIGNLELAWDMLDLAKII 528


>gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo
           sapiens]
          Length = 790

 Score = 30.4 bits (67), Expect = 6.9
 Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 17/154 (11%)

Query: 233 GDLETLQPGDDVE--FTIKDRNGKEVATDVRLLP--QGTVIFEDISIEHFEGTVTKVIPK 288
           GD   ++P   +E     KD +G E     +L+P  + T +  + S    +G  TKV   
Sbjct: 389 GDQTPIEPQTSIERLTETKDGSGLEEKVRAKLVPSQEETKLSVEESEAAGDGVDTKVAQG 448

Query: 289 VPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRR-DKLERAT 347
              K+  D      KV     +E    ++  K      EG+    +   D+  DK E   
Sbjct: 449 ATEKSPED------KVQIAANEETQEREEQMK------EGEETEGSEEDDKENDKTEEMP 496

Query: 348 NIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCV 381
           N  VL N     NE  E+G +    D     K +
Sbjct: 497 NDSVLENKSLQENEEEEIGNLELAWDMLDLAKII 530


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 30.0 bits (66), Expect = 9.0
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 13  PSPAAPPSL-SLPLSSSSTSSGTKKQKRTPTYQRSMSFDPN 52
           PSP+APPSL +LP   ++  S       +PT Q + SF P+
Sbjct: 343 PSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPS 383


>gi|148886692 FAT tumor suppressor homolog 3 [Homo sapiens]
          Length = 4557

 Score = 30.0 bits (66), Expect = 9.0
 Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 14/167 (8%)

Query: 482  KLTIAFQAKDVEGSTSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATL 541
            ++ +    +D+  ++   +G     ++     PG  +   V  + ++      + YV  L
Sbjct: 2067 RVVVRVNIEDINDNSPVFVGLPYYAAVQVDAEPGTLIYQ-VTAIDKDKGPNGEVTYV--L 2123

Query: 542  KDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHS-V 600
            +D++G  E   +   +    + F+ D+ ++E G  +   L+K  G    +  V    + V
Sbjct: 2124 QDDYGHFEINPNSGNVILKEA-FNSDLSNIEYGVTI---LAKDGGKPSLSTSVELPITIV 2179

Query: 601  NGITEEADPTIYSGKV---IR---PLRSVDPTQTEYQGMIEIVEEGD 641
            N      D   Y+  V   IR   P+ S++ T  E QG+I I+ +GD
Sbjct: 2180 NKAMPVFDKPFYTASVNEDIRMNTPILSINATSPEGQGIIYIIIDGD 2226


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,927,705
Number of Sequences: 37866
Number of extensions: 1424462
Number of successful extensions: 4886
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 4732
Number of HSP's gapped (non-prelim): 51
length of query: 813
length of database: 18,247,518
effective HSP length: 111
effective length of query: 702
effective length of database: 14,044,392
effective search space: 9859163184
effective search space used: 9859163184
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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