CSDE1 11117

Name: CSDE1	Sequence: fasta or formatted (813aa)		NCBI GI: 194473720
Description: upstream of NRAS isoform 3		Not currently referenced in the text
Other entries for this name: alt prot {767aa} upstream of NRAS isoform 2 alt prot {798aa} upstream of NRAS isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 42 2 C cysteine 1.6 13 1 D aspartate 6.6 54 2 E glutamate 7.5 61 2 F phenylalanine 5.5 45 2 G glycine 7.7 63 1 H histidine 2.2 18 1 I isoleucine 5.5 45 2 K lysine 7.6 62 3 L leucine 6.6 54 2 M methionine 2.0 16 1 N asparagine 5.0 41 2 P proline 4.6 37 2 Q glutamine 4.2 34 2 R arginine 5.3 43 2 S serine 6.6 54 4 T threonine 5.7 46 2 V valine 8.4 68 2 W tryptophan 0.1 1 1 Y tyrosine 2.0 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 upstream of NRAS isoform 3 CSDE1 0.944 upstream of NRAS isoform 2 CSDE1 0.933 upstream of NRAS isoform 1 PHLDB1 0.007 pleckstrin homology-like domain, family B, member 1... PHLDB1 0.006 pleckstrin homology-like domain, family B, member 1... PHLDB1 0.006 pleckstrin homology-like domain, family B, member 1 ... CARHSP1 0.006 calcium-regulated heat-stable protein 1 CARHSP1 0.006 calcium-regulated heat-stable protein 1 ORAI1 0.005 calcium release-activated calcium channel protein 1 ... ERBB3 0.005 erbB-3 isoform 1 precursor MUC15 0.005 mucin 15 isoform a MUC15 0.005 mucin 15 isoform b ASXL2 0.005 additional sex combs like 2 ATAD2B 0.004 ATPase family, AAA domain containing 2B FLJ22184 0.004 PREDICTED: hypothetical protein LOC80164 YBX2 0.004 Y box binding protein 2 EP400 0.004 E1A binding protein p400 TTN 0.003 titin isoform novex-3 YBX1 0.003 nuclease sensitive element binding protein 1 CSDA 0.003 cold shock domain protein A isoform b CSDA 0.003 cold shock domain protein A isoform a NASP 0.003 nuclear autoantigenic sperm protein isoform 2 NASP 0.003 nuclear autoantigenic sperm protein isoform 1 FLJ22184 0.003 PREDICTED: hypothetical protein FLJ22184 FAT3 0.003 FAT tumor suppressor homolog 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.