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Search of human proteins with 194328736
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194328736 PHD finger protein 10 isoform b [Homo sapiens]
(496 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194328736 PHD finger protein 10 isoform b [Homo sapiens] 1032 0.0
gi|194328734 PHD finger protein 10 isoform a [Homo sapiens] 1027 0.0
gi|5454004 D4, zinc and double PHD fingers family 2 [Homo sapiens] 130 3e-30
gi|205830434 D4, zinc and double PHD fingers family 1 isoform c ... 124 2e-28
gi|205830430 D4, zinc and double PHD fingers family 1 isoform a ... 124 2e-28
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 122 6e-28
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 122 6e-28
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 122 6e-28
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 121 1e-27
gi|205830432 D4, zinc and double PHD fingers family 1 isoform b ... 116 5e-26
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 79 1e-14
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 76 6e-14
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 55 2e-07
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 54 4e-07
gi|148727368 bromodomain and PHD finger containing, 3 [Homo sapi... 54 4e-07
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 53 6e-07
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 52 1e-06
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 52 1e-06
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 52 2e-06
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 51 2e-06
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa... 51 3e-06
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa... 51 3e-06
gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens] 50 4e-06
gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive ... 50 4e-06
gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo... 50 5e-06
gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo... 50 5e-06
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 50 6e-06
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens] 50 6e-06
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 49 1e-05
gi|51173722 bromodomain and PHD finger-containing protein 1 isof... 49 1e-05
>gi|194328736 PHD finger protein 10 isoform b [Homo sapiens]
Length = 496
Score = 1032 bits (2669), Expect = 0.0
Identities = 496/496 (100%), Positives = 496/496 (100%)
Query: 1 MAAAAGPGAALSPRPCDSDPATPGAQSPKDDNEDNSNDGTQPSKRRRMGSGDSSRSCETS 60
MAAAAGPGAALSPRPCDSDPATPGAQSPKDDNEDNSNDGTQPSKRRRMGSGDSSRSCETS
Sbjct: 1 MAAAAGPGAALSPRPCDSDPATPGAQSPKDDNEDNSNDGTQPSKRRRMGSGDSSRSCETS 60
Query: 61 SQDLGFSYYPAENLIEYKWPPDETGEYYMLQEQVSEYLGVTSFKRKYPERRDLSHKEKLY 120
SQDLGFSYYPAENLIEYKWPPDETGEYYMLQEQVSEYLGVTSFKRKYPERRDLSHKEKLY
Sbjct: 61 SQDLGFSYYPAENLIEYKWPPDETGEYYMLQEQVSEYLGVTSFKRKYPERRDLSHKEKLY 120
Query: 121 LRELNVITETQCTLGLTALRSDEVIDLMIKEYPAKHAEYSVILQEKERQRITDHYKEYSQ 180
LRELNVITETQCTLGLTALRSDEVIDLMIKEYPAKHAEYSVILQEKERQRITDHYKEYSQ
Sbjct: 121 LRELNVITETQCTLGLTALRSDEVIDLMIKEYPAKHAEYSVILQEKERQRITDHYKEYSQ 180
Query: 181 MQQQNTQKVEASKVPEYIKKAAKKAAEFNSNLNRERMEERRAYFDLQTHVIQVPQGKYKV 240
MQQQNTQKVEASKVPEYIKKAAKKAAEFNSNLNRERMEERRAYFDLQTHVIQVPQGKYKV
Sbjct: 181 MQQQNTQKVEASKVPEYIKKAAKKAAEFNSNLNRERMEERRAYFDLQTHVIQVPQGKYKV 240
Query: 241 LPTERTKVSSYPVALIPGQFQEYYKRYSPDELRYLPLNTALYEPPLDPELPALDSDGDSD 300
LPTERTKVSSYPVALIPGQFQEYYKRYSPDELRYLPLNTALYEPPLDPELPALDSDGDSD
Sbjct: 241 LPTERTKVSSYPVALIPGQFQEYYKRYSPDELRYLPLNTALYEPPLDPELPALDSDGDSD 300
Query: 301 DGEDGRGDEKRKNKGTSDSSSGNVSEGESPPDSQEDSFQGRQKSKDKAATPRKDGPKRSV 360
DGEDGRGDEKRKNKGTSDSSSGNVSEGESPPDSQEDSFQGRQKSKDKAATPRKDGPKRSV
Sbjct: 301 DGEDGRGDEKRKNKGTSDSSSGNVSEGESPPDSQEDSFQGRQKSKDKAATPRKDGPKRSV 360
Query: 361 LSKSVPGYKPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSM 420
LSKSVPGYKPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSM
Sbjct: 361 LSKSVPGYKPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSM 420
Query: 421 IKTYPWQCMECKTCIICGQPHHEEEMMFCDMCDRGYHTFCVGLGAIPSGRWICDCCQRAP 480
IKTYPWQCMECKTCIICGQPHHEEEMMFCDMCDRGYHTFCVGLGAIPSGRWICDCCQRAP
Sbjct: 421 IKTYPWQCMECKTCIICGQPHHEEEMMFCDMCDRGYHTFCVGLGAIPSGRWICDCCQRAP 480
Query: 481 PTPRKVGRRGKNSKEG 496
PTPRKVGRRGKNSKEG
Sbjct: 481 PTPRKVGRRGKNSKEG 496
>gi|194328734 PHD finger protein 10 isoform a [Homo sapiens]
Length = 498
Score = 1027 bits (2656), Expect = 0.0
Identities = 496/498 (99%), Positives = 496/498 (99%), Gaps = 2/498 (0%)
Query: 1 MAAAAGPGAALSPRPCDSDPATPGAQSPKDDNEDNSNDGTQPSKRRRMGSGDSSRSCETS 60
MAAAAGPGAALSPRPCDSDPATPGAQSPKDDNEDNSNDGTQPSKRRRMGSGDSSRSCETS
Sbjct: 1 MAAAAGPGAALSPRPCDSDPATPGAQSPKDDNEDNSNDGTQPSKRRRMGSGDSSRSCETS 60
Query: 61 SQDLGFSYYPAENLIEYKWPPDETGEYYMLQEQVSEYLGVTSFKRKYP--ERRDLSHKEK 118
SQDLGFSYYPAENLIEYKWPPDETGEYYMLQEQVSEYLGVTSFKRKYP ERRDLSHKEK
Sbjct: 61 SQDLGFSYYPAENLIEYKWPPDETGEYYMLQEQVSEYLGVTSFKRKYPDLERRDLSHKEK 120
Query: 119 LYLRELNVITETQCTLGLTALRSDEVIDLMIKEYPAKHAEYSVILQEKERQRITDHYKEY 178
LYLRELNVITETQCTLGLTALRSDEVIDLMIKEYPAKHAEYSVILQEKERQRITDHYKEY
Sbjct: 121 LYLRELNVITETQCTLGLTALRSDEVIDLMIKEYPAKHAEYSVILQEKERQRITDHYKEY 180
Query: 179 SQMQQQNTQKVEASKVPEYIKKAAKKAAEFNSNLNRERMEERRAYFDLQTHVIQVPQGKY 238
SQMQQQNTQKVEASKVPEYIKKAAKKAAEFNSNLNRERMEERRAYFDLQTHVIQVPQGKY
Sbjct: 181 SQMQQQNTQKVEASKVPEYIKKAAKKAAEFNSNLNRERMEERRAYFDLQTHVIQVPQGKY 240
Query: 239 KVLPTERTKVSSYPVALIPGQFQEYYKRYSPDELRYLPLNTALYEPPLDPELPALDSDGD 298
KVLPTERTKVSSYPVALIPGQFQEYYKRYSPDELRYLPLNTALYEPPLDPELPALDSDGD
Sbjct: 241 KVLPTERTKVSSYPVALIPGQFQEYYKRYSPDELRYLPLNTALYEPPLDPELPALDSDGD 300
Query: 299 SDDGEDGRGDEKRKNKGTSDSSSGNVSEGESPPDSQEDSFQGRQKSKDKAATPRKDGPKR 358
SDDGEDGRGDEKRKNKGTSDSSSGNVSEGESPPDSQEDSFQGRQKSKDKAATPRKDGPKR
Sbjct: 301 SDDGEDGRGDEKRKNKGTSDSSSGNVSEGESPPDSQEDSFQGRQKSKDKAATPRKDGPKR 360
Query: 359 SVLSKSVPGYKPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELV 418
SVLSKSVPGYKPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELV
Sbjct: 361 SVLSKSVPGYKPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELV 420
Query: 419 SMIKTYPWQCMECKTCIICGQPHHEEEMMFCDMCDRGYHTFCVGLGAIPSGRWICDCCQR 478
SMIKTYPWQCMECKTCIICGQPHHEEEMMFCDMCDRGYHTFCVGLGAIPSGRWICDCCQR
Sbjct: 421 SMIKTYPWQCMECKTCIICGQPHHEEEMMFCDMCDRGYHTFCVGLGAIPSGRWICDCCQR 480
Query: 479 APPTPRKVGRRGKNSKEG 496
APPTPRKVGRRGKNSKEG
Sbjct: 481 APPTPRKVGRRGKNSKEG 498
>gi|5454004 D4, zinc and double PHD fingers family 2 [Homo sapiens]
Length = 391
Score = 130 bits (327), Expect = 3e-30
Identities = 78/238 (32%), Positives = 113/238 (47%), Gaps = 27/238 (11%)
Query: 266 RYSPDELRYLPL-NTALYEPPLDPE--LPALDSDGDSDDGEDGRGDEKRKNKGTSDSSS- 321
R D L P+ N+ + L+P+ L LD + +D RG K K KG +
Sbjct: 137 RVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRRGKGKSKGKGVGSARKK 196
Query: 322 --GNVSEGESPPDSQE-----------------DSFQGRQKSKDKA-ATPRKDGPKRSVL 361
++ E P + + S ++ +DK + P +RS
Sbjct: 197 LDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGEDKEDSQPPTPVSQRSEE 256
Query: 362 SKSVPGYKPKVIPNAICGICLKGKESNKK-GKAESLIHCSQCENSGHPSCLDMTMELVSM 420
KS G +PN C CL + NKK G+ E L+ CS C SGHPSCL T +++
Sbjct: 257 QKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAA 316
Query: 421 IKTYPWQCMECKTCIICGQPHHEEEMMFCDMCDRGYHTFCV--GLGAIPSGRWICDCC 476
+KTY WQC+ECK C ICG ++++++FCD CDRGYH +C+ + P G W C C
Sbjct: 317 VKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLC 374
>gi|205830434 D4, zinc and double PHD fingers family 1 isoform c
[Homo sapiens]
Length = 332
Score = 124 bits (311), Expect = 2e-28
Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 372 VIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMEC 431
VIPN C CL G S K G E LI C+ C SGHPSCL T+ + + ++TY WQC+EC
Sbjct: 213 VIPNGYCDFCLGG--SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIEC 270
Query: 432 KTCIICGQPHHEEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCCQR 478
K+C +CG ++++++FCD CDRGYH +C+ + P G W C C R
Sbjct: 271 KSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLR 319
>gi|205830430 D4, zinc and double PHD fingers family 1 isoform a
[Homo sapiens]
Length = 414
Score = 124 bits (311), Expect = 2e-28
Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 372 VIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMEC 431
VIPN C CL G S K G E LI C+ C SGHPSCL T+ + + ++TY WQC+EC
Sbjct: 295 VIPNGYCDFCLGG--SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIEC 352
Query: 432 KTCIICGQPHHEEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCCQR 478
K+C +CG ++++++FCD CDRGYH +C+ + P G W C C R
Sbjct: 353 KSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLR 401
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 122 bits (307), Expect = 6e-28
Identities = 59/124 (47%), Positives = 72/124 (58%), Gaps = 8/124 (6%)
Query: 369 KPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQC 428
KP P IC CL KE N++ K E LI C+ C NSGHPSCL + EL +K WQC
Sbjct: 200 KPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQC 259
Query: 429 MECKTCIIC-GQPHHEEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCCQRAPPTPRK 485
+ECKTC C Q + + M+FCD CDRG+H C L +P G WIC C+ PRK
Sbjct: 260 IECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICR-----PRK 314
Query: 486 VGRR 489
GR+
Sbjct: 315 KGRK 318
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 122 bits (307), Expect = 6e-28
Identities = 59/124 (47%), Positives = 72/124 (58%), Gaps = 8/124 (6%)
Query: 369 KPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQC 428
KP P IC CL KE N++ K E LI C+ C NSGHPSCL + EL +K WQC
Sbjct: 200 KPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQC 259
Query: 429 MECKTCIIC-GQPHHEEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCCQRAPPTPRK 485
+ECKTC C Q + + M+FCD CDRG+H C L +P G WIC C+ PRK
Sbjct: 260 IECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICR-----PRK 314
Query: 486 VGRR 489
GR+
Sbjct: 315 KGRK 318
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 122 bits (307), Expect = 6e-28
Identities = 59/124 (47%), Positives = 72/124 (58%), Gaps = 8/124 (6%)
Query: 369 KPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQC 428
KP P IC CL KE N++ K E LI C+ C NSGHPSCL + EL +K WQC
Sbjct: 200 KPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQC 259
Query: 429 MECKTCIIC-GQPHHEEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCCQRAPPTPRK 485
+ECKTC C Q + + M+FCD CDRG+H C L +P G WIC C+ PRK
Sbjct: 260 IECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICR-----PRK 314
Query: 486 VGRR 489
GR+
Sbjct: 315 KGRK 318
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 121 bits (304), Expect = 1e-27
Identities = 56/124 (45%), Positives = 74/124 (59%), Gaps = 8/124 (6%)
Query: 369 KPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQC 428
+P+ P IC CL KESN++ K E L+ C+ C +SGHPSCL EL + +K WQC
Sbjct: 207 QPRADPIPICSFCLGTKESNREKKPEELLSCADCGSSGHPSCLKFCPELTTNVKALRWQC 266
Query: 429 MECKTCIICG-QPHHEEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCCQRAPPTPRK 485
+ECKTC C Q + + M+FCD CDRG+H C L +P G WIC C+ P+K
Sbjct: 267 IECKTCSACRVQGRNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCR-----PKK 321
Query: 486 VGRR 489
GR+
Sbjct: 322 KGRK 325
>gi|205830432 D4, zinc and double PHD fingers family 1 isoform b
[Homo sapiens]
Length = 380
Score = 116 bits (290), Expect = 5e-26
Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 14/119 (11%)
Query: 372 VIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMEC 431
VIPN C CL G S K G E LI C+ C SGHPSCL T+ + + ++TY WQC+EC
Sbjct: 251 VIPNGYCDFCLGG--SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIEC 308
Query: 432 KTCIICGQPHH----------EEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCCQR 478
K+C +CG + +++++FCD CDRGYH +C+ + P G W C C R
Sbjct: 309 KSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLR 367
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 78.6 bits (192), Expect = 1e-14
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 372 VIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMEC 431
V+ +C +C S +G L+ CSQC HP C++ + V ++K W+C+EC
Sbjct: 1374 VLMQDMCVVC----GSFGRGAEGHLLACSQCSQCYHPYCVNSKITKVMLLKG--WRCVEC 1427
Query: 432 KTCIICGQPHHEEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCC 476
C +CGQ ++ CD CD YHT+C+ L +P G W C C
Sbjct: 1428 IVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWC 1474
Score = 77.0 bits (188), Expect = 4e-14
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 373 IPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMECK 432
+ A C +C G+ L C+ C + H +CLD + + K WQC ECK
Sbjct: 224 LEEARCAVC------EGPGELCDLFFCTSCGHHYHGACLDTAL---TARKRAGWQCPECK 274
Query: 433 TCIICGQPHHEEEMMFCDMCDRGYHTFCV--GLGAIPSGRWICDCCQ 477
C C +P ++ +M+ C+ CD+GYHTFC+ + +P+ W C C+
Sbjct: 275 VCQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKACR 321
Score = 40.0 bits (92), Expect = 0.005
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 11/85 (12%)
Query: 378 CGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMECKTCIIC 437
C C + K G ++ C C+ H CL ME + + W+C C+ C C
Sbjct: 270 CPECKVCQACRKPGNDSKMLVCETCDKGYHTFCLKPPME---ELPAHSWKCKACRVCRAC 326
Query: 438 G------QPHHE--EEMMFCDMCDR 454
G P+ E E C C +
Sbjct: 327 GAGSAELNPNSEWFENYSLCHRCHK 351
Score = 34.7 bits (78), Expect = 0.21
Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 40/118 (33%)
Query: 377 ICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMECKTCII 436
+C +C + + ++ L+ C C+ S H CLD + V W+C C +C+
Sbjct: 1429 VCEVCGQASDPSR------LLLCDDCDISYHTYCLDPPLLTVPK---GGWKCKWCVSCMQ 1479
Query: 437 CG------------------------------QPHHEEEMMF-CDMCDRGYHTFCVGL 463
CG P+ EE+++ C C+R H C L
Sbjct: 1480 CGAASPGFHCEWQNSYTHCGPCASLVTCPICHAPYVEEDLLIQCRHCERWMHAGCESL 1537
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 76.3 bits (186), Expect = 6e-14
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 375 NAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMECKTC 434
+A C +C + G C+ C H CLD+ V+ +K WQC ECK C
Sbjct: 341 DANCAVC------DSPGDLLDQFFCTTCGQHYHGMCLDIA---VTPLKRAGWQCPECKVC 391
Query: 435 IICGQPHHEEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCCQ 477
C Q + +M+ CD CD+GYHTFC+ + ++P+ W C C+
Sbjct: 392 QNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCR 436
Score = 73.2 bits (178), Expect = 5e-13
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 377 ICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMECKTCII 436
+CG +G E L+ CSQC HP C+ ++++ ++ + W+C+EC C
Sbjct: 962 VCGSFGQGAEGR-------LLACSQCGQCYHPYCV--SIKITKVVLSKGWRCLECTVCEA 1012
Query: 437 CGQPHHEEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCC 476
CG+ ++ CD CD YHT+C+ L +P G W C C
Sbjct: 1013 CGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWC 1054
Score = 48.1 bits (113), Expect = 2e-05
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 18/111 (16%)
Query: 378 CGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMECKTCIIC 437
C +C K+S + K ++ C C+ H CL M+ V T W+C C+ CI C
Sbjct: 388 CKVCQNCKQSGEDSK---MLVCDTCDKGYHTFCLQPVMKSVP---TNGWKCKNCRICIEC 441
Query: 438 G-----QPHHEEEMMFCDMCDRGYHTFCVGLG-----AIPSGRWICDCCQR 478
G Q HH + CD C + C G + C+ C+R
Sbjct: 442 GTRSSSQWHH--NCLICDNCYQQQDNLCPFCGKCYHPELQKDMLHCNMCKR 490
Score = 36.6 bits (83), Expect = 0.054
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 425 PWQCMECKTCIICGQPHHEEEMMFCDMCDRGYHTFCVGLGAIPSGR--WICDCCQ 477
P + E C +C P + FC C + YH C+ + P R W C C+
Sbjct: 335 PERSKEDANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 389
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 54.7 bits (130), Expect = 2e-07
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 434 CIICGQPHHEEEMMFCDMCDRGYHTFCV--GLGAIPSGRWICDCCQ 477
C CG P+H E ++ CD CD GYHT C+ L IP G W C CQ
Sbjct: 894 CKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQ 939
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 53.5 bits (127), Expect = 4e-07
Identities = 46/166 (27%), Positives = 62/166 (37%), Gaps = 30/166 (18%)
Query: 330 PPDSQEDSFQGRQKSKDKAATPRKDGPKRSVLSK-----------SVPGYKPKVIPNAIC 378
P S + + G+QKS D R D + L SVPG P V C
Sbjct: 1150 PFASFPNGWTGKQKSPDGVHRVRVDFKEDCDLENVWLMGGLSVLTSVPGGPPMV-----C 1204
Query: 379 GICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMECKTCIICG 438
+C KG E L+ C C + HP CL+ + W C CK C +CG
Sbjct: 1205 LLCAS------KGLHE-LVFCQVCCDPFHPFCLEEAERPLPQHHD-TWCCRRCKFCHVCG 1256
Query: 439 QP-HHEEEMMFCDMCDRGYHTFCVG-----LGAIPSGRWICDCCQR 478
+ + ++ C+ C YH C+G WIC C R
Sbjct: 1257 RKGRGSKHLLECERCRHAYHPACLGPSYPTRATRKRRHWICSACVR 1302
Score = 39.7 bits (91), Expect = 0.006
Identities = 28/126 (22%), Positives = 42/126 (33%), Gaps = 46/126 (36%)
Query: 378 CGICLKGKESNKKGK-AESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMECKTCII 436
C +C +KG+ ++ L+ C +C ++ HP+CL + + K W C C C
Sbjct: 1252 CHVC------GRKGRGSKHLLECERCRHAYHPACLGPSYPTRATRKRRHWICSACVRCKS 1305
Query: 437 CG---------------------------------------QPHHEEEMMFCDMCDRGYH 457
CG +E +MM C CD H
Sbjct: 1306 CGATPGKNWDVEWSGDYSLCPRCTQLYEKGNYCPICTRCYEDNDYESKMMQCAQCDHWVH 1365
Query: 458 TFCVGL 463
C GL
Sbjct: 1366 AKCEGL 1371
>gi|148727368 bromodomain and PHD finger containing, 3 [Homo
sapiens]
Length = 1205
Score = 53.5 bits (127), Expect = 4e-07
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 434 CIIC--GQPHHEEEMMFCDMCDRGYHTFCVGLGAIPSGRWICDCCQRAPPTP 483
C +C + H+ ++FCD+C+ H C G+ IP G+W+C CC ++P P
Sbjct: 215 CCVCLDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPSRP 266
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 53.1 bits (126), Expect = 6e-07
Identities = 52/222 (23%), Positives = 84/222 (37%), Gaps = 40/222 (18%)
Query: 284 PPLDPELPALDSDGDSDDGEDGRGDEKRKNKGTSDSSSGNVSEGESPPDSQEDSFQGRQK 343
P + P PA D + S GD+ SDS G+ ++GE S+E+ + R
Sbjct: 20 PQVGPADPAGDFEESSVGSSGDSGDD-------SDSEHGDGTDGEDEGASEEEDLEDRSG 72
Query: 344 SKDKAATPRKDGPKRSVLSKSVPGYKPKVIPNA-----ICGICLKGKESNKKGKAESLIH 398
S+D DG ++ + + N+ C ICL G E+ H
Sbjct: 73 SEDS----EDDGETLLEVAGTQGKLEAAGSFNSDDDAESCPICLNAFRDQAVGTPENCAH 128
Query: 399 --CSQC----ENSGHPSCLDMTM------------ELVSMIKTYPWQCMECKT----CII 436
C C + + +D T+ +++ I + E + C +
Sbjct: 129 YFCLDCIVEWSKNANSCPVDRTLFKCICIRAQFGGKILRKIPVENTKASEEEEDPTFCEV 188
Query: 437 CGQPHHEEEMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCC 476
CG+ E+ ++ CD CD GYH C+ L +P W C C
Sbjct: 189 CGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPEC 230
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform b
[Homo sapiens]
Length = 1524
Score = 52.0 bits (123), Expect = 1e-06
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 434 CIICGQPHHEEEMMFCDMCDRGYHTFCV--GLGAIPSGRWICDCCQRAPPTPRKVGRRGK 491
C IC + E M+ CD CDRG+HT+CV L +P G W C C R R++ R +
Sbjct: 1119 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPEC-RPKQRSRRLSSRQR 1177
Query: 492 NSKE 495
S E
Sbjct: 1178 PSLE 1181
Score = 37.7 bits (86), Expect = 0.024
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 15/65 (23%)
Query: 371 KVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYP---WQ 427
K I NA C IC KKG AE+++ C C+ H C+ +KT P W
Sbjct: 1112 KSILNARCKIC------RKKGDAENMVLCDGCDRGHHTYCVR------PKLKTVPEGDWF 1159
Query: 428 CMECK 432
C EC+
Sbjct: 1160 CPECR 1164
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform a
[Homo sapiens]
Length = 1556
Score = 52.0 bits (123), Expect = 1e-06
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 434 CIICGQPHHEEEMMFCDMCDRGYHTFCV--GLGAIPSGRWICDCCQRAPPTPRKVGRRGK 491
C IC + E M+ CD CDRG+HT+CV L +P G W C C R R++ R +
Sbjct: 1151 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPEC-RPKQRSRRLSSRQR 1209
Query: 492 NSKE 495
S E
Sbjct: 1210 PSLE 1213
Score = 37.7 bits (86), Expect = 0.024
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 15/65 (23%)
Query: 371 KVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYP---WQ 427
K I NA C IC KKG AE+++ C C+ H C+ +KT P W
Sbjct: 1144 KSILNARCKIC------RKKGDAENMVLCDGCDRGHHTYCVR------PKLKTVPEGDWF 1191
Query: 428 CMECK 432
C EC+
Sbjct: 1192 CPECR 1196
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 51.6 bits (122), Expect = 2e-06
Identities = 54/227 (23%), Positives = 79/227 (34%), Gaps = 56/227 (24%)
Query: 305 GRGDEKRKNKG-------------TSDSSSGNVSEGESPPDSQEDSFQGRQKS--KDKAA 349
G D K+K KG ++ G+ SE + +S DS S + +A
Sbjct: 258 GSKDGKKKGKGKKTAGLKFRFGGISNKRKKGSSSEEDEREESDFDSASIHSASVRSECSA 317
Query: 350 TPRKDGPKRSVLSKSVPGYKPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPS 409
K +R + G + C +C +G E +I C C + H
Sbjct: 318 ALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGE---------IILCDTCPRAYHLV 368
Query: 410 CLDMTMELVSMIKTYPWQCMECKTCIICGQPHHEE------------------------- 444
CLD +E K W C C+ I +P ++
Sbjct: 369 CLDPELEKAPEGK---WSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDG 425
Query: 445 -EMMFCDMCDRGYHTFCVG--LGAIPSGRWICDCCQRAPPTPRKVGR 488
E++ CD C YH C+ L IP+G W+C C PP KV R
Sbjct: 426 GELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC-TCPPLKGKVQR 471
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 51.2 bits (121), Expect = 2e-06
Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 28/180 (15%)
Query: 310 KRKNKGT----SDSSSGNVSEGESPPDSQEDSFQGRQKSKDKAATPRKDGPKRSVLSKSV 365
K++N GT S S+GN S+ + P D + R K+ + SV
Sbjct: 1370 KQENAGTLNILSTLSNGNSSKQKIPADGVH---RIRVDFKEDCEAENVWEMGGLGILTSV 1426
Query: 366 PGYKPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTME-LVSMIKTY 424
P + P +C +C G E ++C C H CL+ L ++
Sbjct: 1427 P-----ITPRVVCFLCASS------GHVE-FVYCQVCCEPFHKFCLEENERPLEDQLEN- 1473
Query: 425 PWQCMECKTCIICGQPHH-EEEMMFCDMCDRGYHTFCVG--LGAIPSGR---WICDCCQR 478
W C CK C +CG+ H ++++ C+ C YH C+G P+ + WIC C R
Sbjct: 1474 -WCCRRCKFCHVCGRQHQATKQLLECNKCRNSYHPECLGPNYPTKPTKKKKVWICTKCVR 1532
Score = 43.1 bits (100), Expect = 6e-04
Identities = 29/126 (23%), Positives = 41/126 (32%), Gaps = 45/126 (35%)
Query: 378 CGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMECKTCIIC 437
C +C + ++ K+ L+ C++C NS HP CL K W C +C C C
Sbjct: 1482 CHVCGRQHQATKQ-----LLECNKCRNSYHPECLGPNYPTKPTKKKKVWICTKCVRCKSC 1536
Query: 438 G----------------------------------------QPHHEEEMMFCDMCDRGYH 457
G +E +MM C CDR H
Sbjct: 1537 GSTTPGKGWDAQWSHDFSLCHDCAKLFAKGNFCPLCDKCYDDDDYESKMMQCGKCDRWVH 1596
Query: 458 TFCVGL 463
+ C L
Sbjct: 1597 SKCENL 1602
>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
sapiens]
Length = 1690
Score = 50.8 bits (120), Expect = 3e-06
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 434 CIICGQPHHEEEMMFCDMCDRGYHTFCV--GLGAIPSGRWICDCC 476
C+ CG+ ++E++++ CD CD YHTFC+ L +P G W C C
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKC 340
Score = 30.0 bits (66), Expect = 5.1
Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 21/158 (13%)
Query: 286 LDPELPALDSDGDSDDGEDGRGDEKRKNKGTSDSSSGNVSEGESPPDSQ--------EDS 337
++PE+ + D+ + G KR + + S SG+VS Q
Sbjct: 192 VEPEVLSTDTQTSPEPGTRMNILPKRTRRVKTQSESGDVSRNTELKKLQIFGAGPKVVGL 251
Query: 338 FQGRQKSKDKAATPRKDGPKRSVLSKSVPGYKPKVIPNAI----CGICLKGKESNKKGKA 393
G + +D+ RK + + + K + N + C C +G +K
Sbjct: 252 AMGTKDKEDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDK---- 307
Query: 394 ESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMEC 431
L+ C C++S H CL + + + W+C +C
Sbjct: 308 --LLLCDGCDDSYHTFCL---IPPLPDVPKGDWRCPKC 340
>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
sapiens]
Length = 1641
Score = 50.8 bits (120), Expect = 3e-06
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 434 CIICGQPHHEEEMMFCDMCDRGYHTFCV--GLGAIPSGRWICDCC 476
C+ CG+ ++E++++ CD CD YHTFC+ L +P G W C C
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKC 340
Score = 30.0 bits (66), Expect = 5.1
Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 21/158 (13%)
Query: 286 LDPELPALDSDGDSDDGEDGRGDEKRKNKGTSDSSSGNVSEGESPPDSQ--------EDS 337
++PE+ + D+ + G KR + + S SG+VS Q
Sbjct: 192 VEPEVLSTDTQTSPEPGTRMNILPKRTRRVKTQSESGDVSRNTELKKLQIFGAGPKVVGL 251
Query: 338 FQGRQKSKDKAATPRKDGPKRSVLSKSVPGYKPKVIPNAI----CGICLKGKESNKKGKA 393
G + +D+ RK + + + K + N + C C +G +K
Sbjct: 252 AMGTKDKEDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDK---- 307
Query: 394 ESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMEC 431
L+ C C++S H CL + + + W+C +C
Sbjct: 308 --LLLCDGCDDSYHTFCL---IPPLPDVPKGDWRCPKC 340
>gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens]
Length = 1544
Score = 50.4 bits (119), Expect = 4e-06
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 434 CIICGQPHHEEEMMFCDMCDRGYHTFCV--GLGAIPSGRWICDCC 476
C++CG + E+ ++ CD CD YHTFC+ L +P G W C C
Sbjct: 312 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKC 356
Score = 38.5 bits (88), Expect = 0.014
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 425 PWQCMECKTCIICGQPHHEEEMMFCDMCDRGYHTFCVGLGAIPSGR--WICDCCQRAPPT 482
P Q ++ K C+ P M+ C++C +HT CV + +I G W+C C+R+
Sbjct: 1170 PLQDVDIKICLCQKAP--AAPMIQCELCRDAFHTSCVAVPSISQGLRIWLCPHCRRSEKP 1227
Query: 483 P 483
P
Sbjct: 1228 P 1228
>gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive
domain 1B (RBP2-like), partial [Homo sapiens]
Length = 977
Score = 50.4 bits (119), Expect = 4e-06
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 434 CIICGQPHHEEEMMFCDMCDRGYHTFCV--GLGAIPSGRWICDCC 476
C++CG + E+ ++ CD CD YHTFC+ L +P G W C C
Sbjct: 312 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKC 356
>gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo
sapiens]
Length = 1483
Score = 50.1 bits (118), Expect = 5e-06
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 434 CIICGQPHHEEEMMFCDMCDRGYHTFCV--GLGAIPSGRWICDCCQRAPPTPRKVGRRGK 491
C +C + +++++ CD C++ +H FC+ L +P G W C CQ P T R+ RG+
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQ--PATARR-NSRGR 1243
Query: 492 NSKE 495
N E
Sbjct: 1244 NYTE 1247
Score = 33.1 bits (74), Expect = 0.60
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Query: 375 NAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMECK 432
NA C +C KKG+ + LI C +C + H CL + + WQC C+
Sbjct: 1184 NARCKVC------RKKGEDDKLILCDECNKAFHLFCL---RPALYEVPDGEWQCPACQ 1232
>gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo
sapiens]
Length = 1905
Score = 50.1 bits (118), Expect = 5e-06
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 433 TCIICGQPHHEEEMMFCDMCDRGYHTFC--VGLGAIPSGRWICDCC---QRAPPTPRKVG 487
TC++C + ++E ++ CD CDRG H +C + A+P G W C C Q +K G
Sbjct: 1678 TCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCTVCLAQQVEGEFTQKPG 1737
Query: 488 --RRGKNSKEG 496
+RG+ K G
Sbjct: 1738 FPKRGQKRKSG 1748
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 49.7 bits (117), Expect = 6e-06
Identities = 47/196 (23%), Positives = 67/196 (34%), Gaps = 33/196 (16%)
Query: 294 DSDGDSDDGEDGRGDEKRKNKGTSDSSSGNVSEGESPPDSQEDSFQGRQKSKDKAAT--- 350
D D + D+ E DE ++G + S SEG ++ R + D+ T
Sbjct: 233 DGDNEDDEDEGSGSDEDENDEGNDEDHSSPASEGGC--KKKKSKVLSRNSADDEELTNDS 290
Query: 351 ----PRKDGPKRSVLSKSVPGYKPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSG 406
K +L KS K+ IC +CL + A+ +I C C +
Sbjct: 291 LTLSQSKSNEDSLILEKSQNWSSQKMDHILICCVCL----GDNSEDADEIIQCDNCGITV 346
Query: 407 HPSCL------DMTMELVSMIKTYPWQCMECKTCIICGQPHHEEEMMFCDMCDRGYHTFC 460
H C D M S T PW C CK CG C++C F
Sbjct: 347 HEGCYGVDGESDSIMSSASENSTEPWFCDACK----CGVSPS------CELCPNQDGIF- 395
Query: 461 VGLGAIPSGRWICDCC 476
+GRW+ C
Sbjct: 396 ---KETDAGRWVHIVC 408
Score = 32.0 bits (71), Expect = 1.3
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 433 TCIICGQPHHEEEMMFCDMCDRGYHTFCVG--LGAIP----SGRWICDCCQRA 479
+C IC + H + ++ CD C YH C+ L +P + W C C +A
Sbjct: 727 SCGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSECDQA 779
>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
Length = 948
Score = 49.7 bits (117), Expect = 6e-06
Identities = 47/196 (23%), Positives = 67/196 (34%), Gaps = 33/196 (16%)
Query: 294 DSDGDSDDGEDGRGDEKRKNKGTSDSSSGNVSEGESPPDSQEDSFQGRQKSKDKAAT--- 350
D D + D+ E DE ++G + S SEG ++ R + D+ T
Sbjct: 233 DGDNEDDEDEGSGSDEDENDEGNDEDHSSPASEGGC--KKKKSKVLSRNSADDEELTNDS 290
Query: 351 ----PRKDGPKRSVLSKSVPGYKPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSG 406
K +L KS K+ IC +CL + A+ +I C C +
Sbjct: 291 LTLSQSKSNEDSLILEKSQNWSSQKMDHILICCVCL----GDNSEDADEIIQCDNCGITV 346
Query: 407 HPSCL------DMTMELVSMIKTYPWQCMECKTCIICGQPHHEEEMMFCDMCDRGYHTFC 460
H C D M S T PW C CK CG C++C F
Sbjct: 347 HEGCYGVDGESDSIMSSASENSTEPWFCDACK----CGVSPS------CELCPNQDGIF- 395
Query: 461 VGLGAIPSGRWICDCC 476
+GRW+ C
Sbjct: 396 ---KETDAGRWVHIVC 408
Score = 40.0 bits (92), Expect = 0.005
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 12/91 (13%)
Query: 342 QKSKDKAATPRKDGPKRSVLSKSVPGYKPKVIP-NAICGICLKGKESNKKGKAESLIHCS 400
++ K + PR+ ++SVL K KPK C C KG N E+L+ C
Sbjct: 839 EEEKHEERVPRERRQRQSVLQK-----KPKAEDLRTECATC-KGTGDN-----ENLVRCD 887
Query: 401 QCENSGHPSCLDMTMELVSMIKTYPWQCMEC 431
+C H CLD ++ Y W C EC
Sbjct: 888 ECRLCYHFGCLDPPLKKSPKQTGYGWICQEC 918
Score = 32.0 bits (71), Expect = 1.3
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 433 TCIICGQPHHEEEMMFCDMCDRGYHTFCVG--LGAIP----SGRWICDCCQRA 479
+C IC + H + ++ CD C YH C+ L +P + W C C +A
Sbjct: 727 SCGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSECDQA 779
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 48.9 bits (115), Expect = 1e-05
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 409 SCLDMTMELVSMIKTYPWQCMECKT-CIICGQPHHEEEMMFCDMCDRGYHTFC--VGLGA 465
S + + + + K+ W+ K C IC + +EE ++ CD CD+G HT+C +
Sbjct: 1908 SAAQVALCIQQLQKSIAWEKSIMKVYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITT 1967
Query: 466 IPSGRWICDCC-QRAPPTPRKV------GRRGKNSKEG 496
IP G W C C +A K+ G++ SK+G
Sbjct: 1968 IPDGDWFCPACIAKASGQTLKIKKLHVKGKKTNESKKG 2005
Score = 30.0 bits (66), Expect = 5.1
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 294 DSDGDSDDGEDGRGDEKRKNKGTSDSSSGNVSEGESPPDSQEDSFQGRQKSKDKAATPRK 353
+ D + DD E+ D++ S S S + SE ++ +ED Q D K
Sbjct: 608 NEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKDQDESDSDTEGEK 667
Query: 354 DGPKRSVLSKSV 365
K + + SV
Sbjct: 668 TSMKLNKTTSSV 679
>gi|51173722 bromodomain and PHD finger-containing protein 1 isoform
2 [Homo sapiens]
Length = 1214
Score = 48.9 bits (115), Expect = 1e-05
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 430 ECKTCIIC--GQPHHEEEMMFCDMCDRGYHTFCVGLGAIPSGRWICDCCQRAP 480
E C IC G+ + ++FCDMC+ H C G+ IP G+W+C C ++P
Sbjct: 272 EDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRCLQSP 324
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,461,464
Number of Sequences: 37866
Number of extensions: 1169751
Number of successful extensions: 6307
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 5334
Number of HSP's gapped (non-prelim): 1022
length of query: 496
length of database: 18,247,518
effective HSP length: 106
effective length of query: 390
effective length of database: 14,233,722
effective search space: 5551151580
effective search space used: 5551151580
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.