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Search of human proteins with 113413791
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113413791 PREDICTED: hypothetical protein [Homo sapiens]
(176 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169164003 PREDICTED: hypothetical protein [Homo sapiens] 374 e-104
gi|113413791 PREDICTED: hypothetical protein [Homo sapiens] 374 e-104
gi|29826341 calmodulin binding transcription activator 2 [Homo s... 30 0.83
gi|42733592 hypothetical protein LOC399693 [Homo sapiens] 30 0.83
gi|167830411 natriuretic peptide receptor 1 [Homo sapiens] 29 2.4
gi|4758666 LATS homolog 1 [Homo sapiens] 29 2.4
gi|157388941 hypothetical protein LOC55071 [Homo sapiens] 29 2.4
gi|239750123 PREDICTED: hypothetical protein XP_002347295 [Homo ... 28 3.1
gi|41582239 immunoglobulin superfamily containing leucine-rich r... 28 3.1
gi|5031809 immunoglobulin superfamily containing leucine-rich re... 28 3.1
gi|148806881 hypothetical protein LOC57608 [Homo sapiens] 28 4.1
gi|110227615 echinoderm microtubule associated protein like 3 [H... 28 4.1
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 28 5.4
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 28 5.4
gi|46409434 hypothetical protein LOC388759 [Homo sapiens] 28 5.4
gi|27754773 protocadherin 1 isoform 2 precursor [Homo sapiens] 28 5.4
gi|47524177 fibroblast growth factor receptor 4 isoform 2 precur... 27 7.0
gi|47524175 fibroblast growth factor receptor 4 isoform 1 precur... 27 7.0
gi|47524173 fibroblast growth factor receptor 4 isoform 1 precur... 27 7.0
gi|205360962 polycystin 1 isoform 2 precursor [Homo sapiens] 27 7.0
gi|205360954 polycystin 1 isoform 1 precursor [Homo sapiens] 27 7.0
gi|239744137 PREDICTED: hypothetical protein XP_002343043 [Homo ... 27 7.0
gi|9910354 THAP domain containing 10 [Homo sapiens] 27 7.0
gi|239758063 PREDICTED: similar to hCG1989297 [Homo sapiens] 27 9.2
gi|239749167 PREDICTED: hypothetical protein XP_002346933 [Homo ... 27 9.2
gi|239747885 PREDICTED: hypothetical protein XP_002346466 [Homo ... 27 9.2
gi|239743236 PREDICTED: hypothetical protein XP_002342810 [Homo ... 27 9.2
gi|239508911 PREDICTED: hypothetical protein [Homo sapiens] 27 9.2
>gi|169164003 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 374 bits (961), Expect = e-104
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MAEDAPSHPQPTLPWRREGACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNN 60
MAEDAPSHPQPTLPWRREGACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNN
Sbjct: 1 MAEDAPSHPQPTLPWRREGACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNN 60
Query: 61 PSEEVAGQRLGRQTDLRGGAVSSGAGQPAPRRNWDLCLGQDVNRNPQARPGHLLPSLEAL 120
PSEEVAGQRLGRQTDLRGGAVSSGAGQPAPRRNWDLCLGQDVNRNPQARPGHLLPSLEAL
Sbjct: 61 PSEEVAGQRLGRQTDLRGGAVSSGAGQPAPRRNWDLCLGQDVNRNPQARPGHLLPSLEAL 120
Query: 121 TPTRVSWRRQCQERLDWDGDGEGCLARRAPLPLGTWQSRGFLTALRLRLGVGSTEK 176
TPTRVSWRRQCQERLDWDGDGEGCLARRAPLPLGTWQSRGFLTALRLRLGVGSTEK
Sbjct: 121 TPTRVSWRRQCQERLDWDGDGEGCLARRAPLPLGTWQSRGFLTALRLRLGVGSTEK 176
>gi|113413791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 374 bits (961), Expect = e-104
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MAEDAPSHPQPTLPWRREGACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNN 60
MAEDAPSHPQPTLPWRREGACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNN
Sbjct: 1 MAEDAPSHPQPTLPWRREGACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNN 60
Query: 61 PSEEVAGQRLGRQTDLRGGAVSSGAGQPAPRRNWDLCLGQDVNRNPQARPGHLLPSLEAL 120
PSEEVAGQRLGRQTDLRGGAVSSGAGQPAPRRNWDLCLGQDVNRNPQARPGHLLPSLEAL
Sbjct: 61 PSEEVAGQRLGRQTDLRGGAVSSGAGQPAPRRNWDLCLGQDVNRNPQARPGHLLPSLEAL 120
Query: 121 TPTRVSWRRQCQERLDWDGDGEGCLARRAPLPLGTWQSRGFLTALRLRLGVGSTEK 176
TPTRVSWRRQCQERLDWDGDGEGCLARRAPLPLGTWQSRGFLTALRLRLGVGSTEK
Sbjct: 121 TPTRVSWRRQCQERLDWDGDGEGCLARRAPLPLGTWQSRGFLTALRLRLGVGSTEK 176
>gi|29826341 calmodulin binding transcription activator 2 [Homo
sapiens]
Length = 1202
Score = 30.4 bits (67), Expect = 0.83
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 50 VPTTPPATCNNPSEEVAGQRLGRQTDLRGGAVSSGAGQPAPRRNWDLCLGQDVNRNPQAR 109
+P+ PP+ +P+ R+GR L GG V + +P ++ +G+ ++ +
Sbjct: 462 IPSPPPSPPPSPAPLEPSSRVGRGEALFGGPVGASELEPFSLSSFPDLMGELISDEAPSI 521
Query: 110 PG---HLLPSLEALTPTRVSW 127
P L P+L +T W
Sbjct: 522 PAPTPQLSPALSTITDFSPEW 542
>gi|42733592 hypothetical protein LOC399693 [Homo sapiens]
Length = 953
Score = 30.4 bits (67), Expect = 0.83
Identities = 36/141 (25%), Positives = 46/141 (32%), Gaps = 27/141 (19%)
Query: 7 SHPQPTLPWRREGACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNNPSEEVA 66
S +P P R G H + R S G R W A PS +
Sbjct: 472 SFQRPESPHERLG---HFSQRPWSALAGQACSPQRAWG-----------AQRQGPSSQRP 517
Query: 67 GQRLGRQTDLRGGAVSSGAGQPAPRRNWDLC-LGQDVN---RNPQARPGHLLPSLEALTP 122
G +++ S+ A QP PRR W C +D RNP RP P
Sbjct: 518 GSPPEKRSPFPQQPWSAVATQPCPRRAWTACETWEDPGPRLRNPLERPS---------PP 568
Query: 123 TRVSWRRQCQERLDWDGDGEG 143
+ W +R G G G
Sbjct: 569 AQRPWSSSGVQRAGPQGKGRG 589
>gi|167830411 natriuretic peptide receptor 1 [Homo sapiens]
Length = 1061
Score = 28.9 bits (63), Expect = 2.4
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 75 DLRGGAVSSGAGQPAPRRNWDLCLGQDVNRNPQARPGHLLPSLEALTPTRVSWRRQ 130
D+ G ++ G G PAPRR W+ GQDV+ + ++ + P + + +Q
Sbjct: 274 DIFGQSLQGGQG-PAPRRPWERGDGQDVSARQAFQAAKIITYKDPDNPEYLEFLKQ 328
>gi|4758666 LATS homolog 1 [Homo sapiens]
Length = 1130
Score = 28.9 bits (63), Expect = 2.4
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 106 PQARPGHLLPSLEALTPTRVSWRRQCQERLDWDGDGEGCLARRAPLPLGTWQ 157
P P P TP SW Q + + G+ E ++R +P+P G WQ
Sbjct: 247 PPPPPRGQTPPPRGTTPPPPSWEPNSQTKR-YSGNMEYVISRISPVPPGAWQ 297
>gi|157388941 hypothetical protein LOC55071 [Homo sapiens]
Length = 194
Score = 28.9 bits (63), Expect = 2.4
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 7/51 (13%)
Query: 51 PTTPPATCNNPSEEVAGQRLGRQTDLRGGAVSSGAGQPA-PRRNWDLCLGQ 100
P PP P EE+ G R L GG GAG+ PR +W + Q
Sbjct: 98 PLPPPPVLPGPGEELPGAR------LPGGGGDDGAGRAGPPRGDWGVASRQ 142
>gi|239750123 PREDICTED: hypothetical protein XP_002347295 [Homo
sapiens]
Length = 194
Score = 28.5 bits (62), Expect = 3.1
Identities = 29/91 (31%), Positives = 33/91 (36%), Gaps = 30/91 (32%)
Query: 17 REGACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNNPSEEVAGQRLG----R 72
R C L G +G RA R W + NP AG R G R
Sbjct: 30 RTRQCVRLCLSAGGGRVG---RAGRAWTV--------------NPKARAAGLRSGAPRRR 72
Query: 73 QTDL------RGGAVSSGAGQPAP---RRNW 94
+ L RGGA +G G PAP RR W
Sbjct: 73 RRGLSLGGGARGGACGAGPGLPAPTWVRRPW 103
>gi|41582239 immunoglobulin superfamily containing leucine-rich
repeat [Homo sapiens]
Length = 428
Score = 28.5 bits (62), Expect = 3.1
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 54 PPATCNNPSEEVAGQRLGRQTDLRGGAV----SSGAGQPAPRRNWDL 96
PP C+ PS +++ Q +LR G V GQPAP+ +W +
Sbjct: 225 PPLPCSAPSVQLSYQPSQDGAELRPGFVLALHCDVDGQPAPQLHWHI 271
>gi|5031809 immunoglobulin superfamily containing leucine-rich
repeat [Homo sapiens]
Length = 428
Score = 28.5 bits (62), Expect = 3.1
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 54 PPATCNNPSEEVAGQRLGRQTDLRGGAV----SSGAGQPAPRRNWDL 96
PP C+ PS +++ Q +LR G V GQPAP+ +W +
Sbjct: 225 PPLPCSAPSVQLSYQPSQDGAELRPGFVLALHCDVDGQPAPQLHWHI 271
>gi|148806881 hypothetical protein LOC57608 [Homo sapiens]
Length = 1359
Score = 28.1 bits (61), Expect = 4.1
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 42 RWRLISFKVPTTPPATCNNPSEEVAGQRLGRQTDLRGGAVSSGAGQPAPRRNWDLCLGQD 101
R R++SF+ A +EE+ G Q L GG VS G+G A R L + +D
Sbjct: 1270 RMRVLSFR-----NADSQEDAEELKATTRG-QAGLPGGLVSPGSGDRAQRLGHSLSVSKD 1323
Query: 102 -VNRNPQARP 110
++R + P
Sbjct: 1324 SISREEKEHP 1333
>gi|110227615 echinoderm microtubule associated protein like 3 [Homo
sapiens]
Length = 896
Score = 28.1 bits (61), Expect = 4.1
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 30 SCNLGTTLRASRRWRLISFKVPTTPPATCNNPS--EEVAGQRLGRQTDLRGGAVSSGAGQ 87
+C R ++ + K PP N P + + + G Q++ GG+ SSGAG
Sbjct: 75 TCTPSLVSRGTQTETEVELKSSPGPPGLSNGPPAPQGASEEPSGTQSE-GGGSSSSGAGS 133
Query: 88 PAP 90
P P
Sbjct: 134 PGP 136
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 27.7 bits (60), Expect = 5.4
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 17/94 (18%)
Query: 9 PQPTLPWRREGACFHLAARNGS-----------CNLGTTLRASRRWRLISFKVPTTPPAT 57
P+P LP A H+ AR + C+ GT R RR R P P
Sbjct: 166 PRPALP-----AALHIGARATAGLAAKRAQPQLCSAGTAARG-RRTRASPPTPPRPRPPG 219
Query: 58 CNNPSEEVAGQRLGRQTDLRGGAVSSGAGQPAPR 91
+ G R+ R T RG GA + PR
Sbjct: 220 LRSGDVPRGGARVERPTGRRGAGGRGGAQRIPPR 253
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 27.7 bits (60), Expect = 5.4
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 17/94 (18%)
Query: 9 PQPTLPWRREGACFHLAARNGS-----------CNLGTTLRASRRWRLISFKVPTTPPAT 57
P+P LP A H+ AR + C+ GT R RR R P P
Sbjct: 166 PRPALP-----AALHIGARATAGLAAKRAQPQLCSAGTAARG-RRTRASPPTPPRPRPPG 219
Query: 58 CNNPSEEVAGQRLGRQTDLRGGAVSSGAGQPAPR 91
+ G R+ R T RG GA + PR
Sbjct: 220 LRSGDVPRGGARVERPTGRRGAGGRGGAQRIPPR 253
>gi|46409434 hypothetical protein LOC388759 [Homo sapiens]
Length = 237
Score = 27.7 bits (60), Expect = 5.4
Identities = 38/148 (25%), Positives = 52/148 (35%), Gaps = 38/148 (25%)
Query: 9 PQPTLPWRREGACFH-------LAARNGSCNL-----GTTLRASRRWRLISFKVPTTPPA 56
P+P+L W + C A+R+GS L +LR ++ R P+ P
Sbjct: 81 PEPSLTWAQGRGCRGHFRSLPAAASRSGSRTLRCASSDRSLREQKQRRAGPDPTPSPAPP 140
Query: 57 TCN--------NPSEEVAGQRLGRQTDLRGGAVSSGAGQPAPRRNWDLCLGQDVNRNPQA 108
PS A + +L+GGA G GQ A V P
Sbjct: 141 PAGPRPSPGSLGPSAPAAPRTARGAYELQGGASQDGPGQAA------------VGATPTT 188
Query: 109 RP-----GHLLPSLEALT-PTRVSWRRQ 130
P G LL T PT +WRR+
Sbjct: 189 GPGTGGEGALLGCGSGRTPPTSATWRRR 216
>gi|27754773 protocadherin 1 isoform 2 precursor [Homo sapiens]
Length = 1237
Score = 27.7 bits (60), Expect = 5.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 10/45 (22%)
Query: 77 RGGAVSSGAGQPAPRRNWDLCLGQDVNRNPQARPGHLLPSLEALT 121
RGG +GAG P+P +RN + P LLPS A +
Sbjct: 1161 RGGQEPAGAGSPSPPE----------DRNTKTAPVRLLPSYSAFS 1195
>gi|47524177 fibroblast growth factor receptor 4 isoform 2 precursor
[Homo sapiens]
Length = 762
Score = 27.3 bits (59), Expect = 7.0
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 5 APSHPQPTLPWRREGACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNNPSEE 64
A +P PT+ W ++G FH G +G + W L+ V + T E
Sbjct: 174 AAGNPTPTIRWLKDGQAFH-----GENRIGGIRLRHQHWSLVMESVVPSDRGTYTCLVEN 228
Query: 65 VAG 67
G
Sbjct: 229 AVG 231
>gi|47524175 fibroblast growth factor receptor 4 isoform 1 precursor
[Homo sapiens]
Length = 802
Score = 27.3 bits (59), Expect = 7.0
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 5 APSHPQPTLPWRREGACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNNPSEE 64
A +P PT+ W ++G FH G +G + W L+ V + T E
Sbjct: 174 AAGNPTPTIRWLKDGQAFH-----GENRIGGIRLRHQHWSLVMESVVPSDRGTYTCLVEN 228
Query: 65 VAG 67
G
Sbjct: 229 AVG 231
>gi|47524173 fibroblast growth factor receptor 4 isoform 1 precursor
[Homo sapiens]
Length = 802
Score = 27.3 bits (59), Expect = 7.0
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 5 APSHPQPTLPWRREGACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNNPSEE 64
A +P PT+ W ++G FH G +G + W L+ V + T E
Sbjct: 174 AAGNPTPTIRWLKDGQAFH-----GENRIGGIRLRHQHWSLVMESVVPSDRGTYTCLVEN 228
Query: 65 VAG 67
G
Sbjct: 229 AVG 231
>gi|205360962 polycystin 1 isoform 2 precursor [Homo sapiens]
Length = 4302
Score = 27.3 bits (59), Expect = 7.0
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 18 EGACFHLAARNGSCNLGTTLRAS--RRWRLISFKVPTTPPA--TCNNPSEEV---AGQRL 70
+ +C A NG C G L + WR F VP PPA + ++V G +
Sbjct: 657 DASCHPQACANG-CTSGPGLPGAPYALWREFLFSVPAGPPAQYSVTLHGQDVLMLPGDLV 715
Query: 71 GRQTDLRGGAV---SSGAGQPAPR 91
G Q D GA+ S G P P+
Sbjct: 716 GLQHDAGPGALLHCSPAPGHPGPQ 739
>gi|205360954 polycystin 1 isoform 1 precursor [Homo sapiens]
Length = 4303
Score = 27.3 bits (59), Expect = 7.0
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 18 EGACFHLAARNGSCNLGTTLRAS--RRWRLISFKVPTTPPA--TCNNPSEEV---AGQRL 70
+ +C A NG C G L + WR F VP PPA + ++V G +
Sbjct: 657 DASCHPQACANG-CTSGPGLPGAPYALWREFLFSVPAGPPAQYSVTLHGQDVLMLPGDLV 715
Query: 71 GRQTDLRGGAV---SSGAGQPAPR 91
G Q D GA+ S G P P+
Sbjct: 716 GLQHDAGPGALLHCSPAPGHPGPQ 739
>gi|239744137 PREDICTED: hypothetical protein XP_002343043 [Homo
sapiens]
Length = 61
Score = 27.3 bits (59), Expect = 7.0
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 106 PQARPGHLLPSLEALTPTRVSWRRQCQERLDWDGDGEGCLARRAPLPLGTWQSRGF 161
P+ARPG LP+ A+ P R S C + D A AP G W SRGF
Sbjct: 2 PRARPGLRLPTGSAIAPGRPS--VHCAGQFD---SRAPYSASSAPSE-GRWPSRGF 51
>gi|9910354 THAP domain containing 10 [Homo sapiens]
Length = 257
Score = 27.3 bits (59), Expect = 7.0
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 20 ACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNNPSEEVAGQRLGRQTDLRGG 79
ACF + S + LR S+R RL++ VPT P G + GR D RG
Sbjct: 61 ACFDV-----SSVIQKNLRFSQRLRLVAGAVPTLHRVPAPAPKRGEEGDQAGR-LDTRGE 114
Query: 80 AVSSGAGQPAP 90
++ + AP
Sbjct: 115 LQAARHSEAAP 125
>gi|239758063 PREDICTED: similar to hCG1989297 [Homo sapiens]
Length = 122
Score = 26.9 bits (58), Expect = 9.2
Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 6/106 (5%)
Query: 12 TLPWRREGACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNNPSEEVAGQRLG 71
T P R C H + C G+ R +P + E+ + G
Sbjct: 8 TYPVRECLLCLHFCSSPPWCCSGSHTRPEPASASPRRSLPEPTSESRVLLCEDYQARVQG 67
Query: 72 RQTDLRGGAVSSGAGQ------PAPRRNWDLCLGQDVNRNPQARPG 111
Q + G A +GA P PR W C G+ +P+ RPG
Sbjct: 68 NQGEEVGPAALAGAFSVLFGRTPPPRIRWKSCRGELALWHPRLRPG 113
>gi|239749167 PREDICTED: hypothetical protein XP_002346933 [Homo
sapiens]
Length = 399
Score = 26.9 bits (58), Expect = 9.2
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 91 RRNWDLCLGQDVNRNPQARPGHLLPSLEALTPTRVSWRRQCQERLDWDGDGEGCLARRAP 150
RR W+ LG + + G + A P+ ++ RR C ER + G R P
Sbjct: 8 RRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGGTSGPRVP 67
Query: 151 L 151
L
Sbjct: 68 L 68
>gi|239747885 PREDICTED: hypothetical protein XP_002346466 [Homo
sapiens]
Length = 122
Score = 26.9 bits (58), Expect = 9.2
Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 6/106 (5%)
Query: 12 TLPWRREGACFHLAARNGSCNLGTTLRASRRWRLISFKVPTTPPATCNNPSEEVAGQRLG 71
T P R C H + C G+ R +P + E+ + G
Sbjct: 8 TYPVRECLLCLHFCSSPPWCCSGSHTRPEPASASPRRSLPEPTSESRVLLCEDYQARVQG 67
Query: 72 RQTDLRGGAVSSGAGQ------PAPRRNWDLCLGQDVNRNPQARPG 111
Q + G A +GA P PR W C G+ +P+ RPG
Sbjct: 68 NQGEEVGPAALAGAFSVLFGRTPPPRIRWKSCRGELALWHPRLRPG 113
>gi|239743236 PREDICTED: hypothetical protein XP_002342810 [Homo
sapiens]
Length = 140
Score = 26.9 bits (58), Expect = 9.2
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 91 RRNWDLCLGQDVNRNPQARPGHLLPSLEALTPTRVSWRRQCQERLDWDGDGEGCLARRAP 150
RR W+ LG + + G + A P+ ++ RR C ER + G R P
Sbjct: 8 RRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGGTSGPRVP 67
Query: 151 L 151
L
Sbjct: 68 L 68
>gi|239508911 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 26.9 bits (58), Expect = 9.2
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 91 RRNWDLCLGQDVNRNPQARPGHLLPSLEALTPTRVSWRRQCQERLDWDGDGEGCLARRAP 150
RR W+ LG + + G + A P+ ++ RR C ER + G R P
Sbjct: 8 RRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGGTSGPRVP 67
Query: 151 L 151
L
Sbjct: 68 L 68
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,720,851
Number of Sequences: 37866
Number of extensions: 465097
Number of successful extensions: 1296
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1285
Number of HSP's gapped (non-prelim): 29
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.