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Search of human proteins with 113413673
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113413673 PREDICTED: hypothetical protein [Homo sapiens]
(119 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169164010 PREDICTED: hypothetical protein [Homo sapiens] 243 2e-65
gi|113413673 PREDICTED: hypothetical protein [Homo sapiens] 243 2e-65
gi|113412839 PREDICTED: hypothetical protein [Homo sapiens] 243 2e-65
gi|121582655 ankyrin repeat domain 35 [Homo sapiens] 32 0.085
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 32 0.14
gi|94721257 solute carrier family 26, member 6 isoform 3 [Homo s... 30 0.42
gi|253735778 Rho/Rac guanine nucleotide exchange factor 2 isofor... 29 0.72
gi|253735775 Rho/Rac guanine nucleotide exchange factor 2 isofor... 29 0.72
gi|15011974 Rho/Rac guanine nucleotide exchange factor 2 isoofor... 29 0.72
gi|38202224 discs large-associated protein 2 [Homo sapiens] 29 0.72
gi|28195384 neuronal pentraxin II [Homo sapiens] 29 0.94
gi|109891938 disks large-associated protein 4 isoform c [Homo sa... 29 0.94
gi|34335251 disks large-associated protein 4 isoform b [Homo sap... 29 0.94
gi|34335253 disks large-associated protein 4 isoform a [Homo sap... 29 0.94
gi|109150435 ankyrin repeat and zinc finger domain containing 1 ... 29 0.94
gi|109150425 ankyrin repeat and zinc finger domain containing 1 ... 29 0.94
gi|47271475 SPOC domain containing 1 [Homo sapiens] 28 1.2
gi|24586688 ankyrin repeat and SOCS box-containing protein 16 [H... 28 1.6
gi|13376339 plasticity-related protein 2 [Homo sapiens] 28 1.6
gi|37595530 polyhomeotic-like 2 isoform b [Homo sapiens] 28 1.6
gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens] 28 1.6
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 28 2.1
gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 27 2.7
gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 27 2.7
gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Hom... 27 2.7
gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo ... 27 3.6
gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo ... 27 3.6
gi|33188443 microfilament and actin filament cross-linker protei... 27 4.7
gi|28466983 leprecan-like 2 [Homo sapiens] 27 4.7
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens] 27 4.7
>gi|169164010 PREDICTED: hypothetical protein [Homo sapiens]
Length = 119
Score = 243 bits (620), Expect = 2e-65
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MGTASLPGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDR 60
MGTASLPGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDR
Sbjct: 1 MGTASLPGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDR 60
Query: 61 AGCLGVSEASSCRRQAAGQRDLRTPDQDSKELNATTQPDLDGICSWVQNGTLIKINLDK 119
AGCLGVSEASSCRRQAAGQRDLRTPDQDSKELNATTQPDLDGICSWVQNGTLIKINLDK
Sbjct: 61 AGCLGVSEASSCRRQAAGQRDLRTPDQDSKELNATTQPDLDGICSWVQNGTLIKINLDK 119
>gi|113413673 PREDICTED: hypothetical protein [Homo sapiens]
Length = 119
Score = 243 bits (620), Expect = 2e-65
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MGTASLPGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDR 60
MGTASLPGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDR
Sbjct: 1 MGTASLPGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDR 60
Query: 61 AGCLGVSEASSCRRQAAGQRDLRTPDQDSKELNATTQPDLDGICSWVQNGTLIKINLDK 119
AGCLGVSEASSCRRQAAGQRDLRTPDQDSKELNATTQPDLDGICSWVQNGTLIKINLDK
Sbjct: 61 AGCLGVSEASSCRRQAAGQRDLRTPDQDSKELNATTQPDLDGICSWVQNGTLIKINLDK 119
>gi|113412839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 119
Score = 243 bits (620), Expect = 2e-65
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MGTASLPGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDR 60
MGTASLPGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDR
Sbjct: 1 MGTASLPGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDR 60
Query: 61 AGCLGVSEASSCRRQAAGQRDLRTPDQDSKELNATTQPDLDGICSWVQNGTLIKINLDK 119
AGCLGVSEASSCRRQAAGQRDLRTPDQDSKELNATTQPDLDGICSWVQNGTLIKINLDK
Sbjct: 61 AGCLGVSEASSCRRQAAGQRDLRTPDQDSKELNATTQPDLDGICSWVQNGTLIKINLDK 119
>gi|121582655 ankyrin repeat domain 35 [Homo sapiens]
Length = 1001
Score = 32.3 bits (72), Expect = 0.085
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 32 EQREEGLEQRECLEAKRWASERERAATDRAGCLGVSEASSCRRQAAGQRDL 82
E++EE ++ C E RW E ER R V + C+ QAA DL
Sbjct: 283 EEQEEKEDEDPCSEEWRWKYEEERRKVVRLEQELVQKTEECKTQAAAYLDL 333
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 31.6 bits (70), Expect = 0.14
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Query: 5 SLPGPLPQVV----RVGNQEAPRHGATQVIMEQREEGLEQRE------CLEAKRWASERE 54
S P P P V G + R AT+++ E+R + EQRE L+A+R RE
Sbjct: 576 SPPAPAPPVTPSKPMAGTTD--REEATRLLAEKRRQAREQREREEQERRLQAERDKRMRE 633
Query: 55 RAATDRAGCLGVSEASSCRRQAAGQRDLRTPDQDSKE 91
A EA + RR+ R+ +Q+ +E
Sbjct: 634 EQLAREAEARAEREAEARRREEQEAREKAQAEQEEQE 670
>gi|94721257 solute carrier family 26, member 6 isoform 3 [Homo
sapiens]
Length = 740
Score = 30.0 bits (66), Expect = 0.42
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 30 IMEQREEGLEQRECLEAKRWASE---RERAATDRAGCLGVSEASSCRRQ----AAGQRDL 82
++ Q+++ L+++E L+ K+ E R++A + CL + SS + A GQ D
Sbjct: 572 LISQKKKLLKKQEQLKLKQLQKEEKLRKQAGPLLSACLAPQQVSSGDKMEDATANGQEDS 631
Query: 83 RTPDQDSKELNATTQPDLDGI 103
+ PD + + QPD +
Sbjct: 632 KAPDGSTLKALGLPQPDFHSL 652
>gi|253735778 Rho/Rac guanine nucleotide exchange factor 2 isoform 2
[Homo sapiens]
Length = 985
Score = 29.3 bits (64), Expect = 0.72
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query: 21 APRHGATQVIMEQREEGLEQRECLEAKRWASERERAA---------TDRAGCLGVSEASS 71
AP AT++ + QR+ L Q E +R ER A +++A L EA
Sbjct: 795 APEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEE 854
Query: 72 CRRQAA 77
RRQ A
Sbjct: 855 ARRQLA 860
>gi|253735775 Rho/Rac guanine nucleotide exchange factor 2 isoform 1
[Homo sapiens]
Length = 986
Score = 29.3 bits (64), Expect = 0.72
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query: 21 APRHGATQVIMEQREEGLEQRECLEAKRWASERERAA---------TDRAGCLGVSEASS 71
AP AT++ + QR+ L Q E +R ER A +++A L EA
Sbjct: 796 APEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEE 855
Query: 72 CRRQAA 77
RRQ A
Sbjct: 856 ARRQLA 861
>gi|15011974 Rho/Rac guanine nucleotide exchange factor 2 isooform 3
[Homo sapiens]
Length = 958
Score = 29.3 bits (64), Expect = 0.72
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query: 21 APRHGATQVIMEQREEGLEQRECLEAKRWASERERAA---------TDRAGCLGVSEASS 71
AP AT++ + QR+ L Q E +R ER A +++A L EA
Sbjct: 768 APEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEE 827
Query: 72 CRRQAA 77
RRQ A
Sbjct: 828 ARRQLA 833
>gi|38202224 discs large-associated protein 2 [Homo sapiens]
Length = 975
Score = 29.3 bits (64), Expect = 0.72
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 6 LPGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDRAGCLG 65
+P P+P+ G R + + QR+E +R + AKR AS R+ +A++RA +
Sbjct: 908 VPPPIPKKPPKGKFPITREKSLDLPDRQRQEA--RRRLMAAKRAASFRQNSASERADSIE 965
Query: 66 V 66
+
Sbjct: 966 I 966
>gi|28195384 neuronal pentraxin II [Homo sapiens]
Length = 431
Score = 28.9 bits (63), Expect = 0.94
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 9 PLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDR-AGCLGVS 67
PLP + G ++P +++ RE ++Q+E L A+R E R T + A C G++
Sbjct: 42 PLPAMPMQGGAQSPEEELRAAVLQLRETVVQQKETLGAQR---EAIRELTGKLARCEGLA 98
Query: 68 EASSCRRQAAGQRDL----RTPDQDSKELNATTQ 97
+ A G+ + R P ++L+ + Q
Sbjct: 99 GGKARGAGATGKDTMGDLPRDPGHVVEQLSRSLQ 132
>gi|109891938 disks large-associated protein 4 isoform c [Homo
sapiens]
Length = 285
Score = 28.9 bits (63), Expect = 0.94
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 7 PGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDRAGCLGV 66
P P+P+ R A+ +QR+E ++ L AKR AS R+ +AT+ A + +
Sbjct: 219 PPPVPKKPAKSKPAVSRDKASDASDKQRQEA--RKRLLAAKRAASVRQNSATESADSIEI 276
>gi|34335251 disks large-associated protein 4 isoform b [Homo
sapiens]
Length = 453
Score = 28.9 bits (63), Expect = 0.94
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 7 PGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDRAGCLGV 66
P P+P+ R A+ +QR+E ++ L AKR AS R+ +AT+ A + +
Sbjct: 387 PPPVPKKPAKSKPAVSRDKASDASDKQRQEA--RKRLLAAKRAASVRQNSATESADSIEI 444
>gi|34335253 disks large-associated protein 4 isoform a [Homo
sapiens]
Length = 989
Score = 28.9 bits (63), Expect = 0.94
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 7 PGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDRAGCLGV 66
P P+P+ R A+ +QR+E ++ L AKR AS R+ +AT+ A + +
Sbjct: 923 PPPVPKKPAKSKPAVSRDKASDASDKQRQEA--RKRLLAAKRAASVRQNSATESADSIEI 980
>gi|109150435 ankyrin repeat and zinc finger domain containing 1
[Homo sapiens]
Length = 726
Score = 28.9 bits (63), Expect = 0.94
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Query: 4 ASLPGPLP------QVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWA--SERER 55
A +PGPL Q R Q+A R + +QR++ E+RE E +R+A S+RE+
Sbjct: 600 AQVPGPLTPEMEARQATRKREQKAARRQREE--QQQRQQEQEEREREEQRRFAALSDREK 657
Query: 56 AA 57
A
Sbjct: 658 RA 659
>gi|109150425 ankyrin repeat and zinc finger domain containing 1
[Homo sapiens]
Length = 726
Score = 28.9 bits (63), Expect = 0.94
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Query: 4 ASLPGPLP------QVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWA--SERER 55
A +PGPL Q R Q+A R + +QR++ E+RE E +R+A S+RE+
Sbjct: 600 AQVPGPLTPEMEARQATRKREQKAARRQREE--QQQRQQEQEEREREEQRRFAALSDREK 657
Query: 56 AA 57
A
Sbjct: 658 RA 659
>gi|47271475 SPOC domain containing 1 [Homo sapiens]
Length = 1216
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Query: 63 CLGVSEASSCRRQAA------GQRDLRTPDQDSKELNATTQP 98
CLG S +S +Q A G + + P QD +EL A QP
Sbjct: 329 CLGASAQASAEQQEAVCVVRTGSDEGQAPAQDQEELEAKAQP 370
>gi|24586688 ankyrin repeat and SOCS box-containing protein 16 [Homo
sapiens]
Length = 453
Score = 28.1 bits (61), Expect = 1.6
Identities = 24/92 (26%), Positives = 30/92 (32%), Gaps = 11/92 (11%)
Query: 18 NQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDRAG----CLGVSEASSCR 73
+QE P H A GLEQ L + A R + C G SCR
Sbjct: 209 SQETPLHVAAA-------RGLEQHVALYLEHGADVGLRTSQGETALNTACAGAEGPGSCR 261
Query: 74 RQAAGQRDLRTPDQDSKELNATTQPDLDGICS 105
R A R L D++ L C+
Sbjct: 262 RHQAAARRLLEAGADARAAGRKRHTPLHNACA 293
>gi|13376339 plasticity-related protein 2 [Homo sapiens]
Length = 746
Score = 28.1 bits (61), Expect = 1.6
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 2 GTASLPGPLP-QVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDR 60
G A PG P V +QE PR GA + EGL + RE
Sbjct: 658 GGAKPPGVSPGSSVSDVDQEEPRFGAVATVNLATGEGLPPLGAADGALGPGSRESTLRRH 717
Query: 61 AGCLGVSE 68
AG LG++E
Sbjct: 718 AGGLGLAE 725
>gi|37595530 polyhomeotic-like 2 isoform b [Homo sapiens]
Length = 323
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 66 VSEASSCRRQAAGQRDLRTPDQDSKEL 92
+S +SS R+ GQRDL PD ++L
Sbjct: 218 ISASSSTSRRRQGQRDLELPDMHMRDL 244
>gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens]
Length = 858
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 66 VSEASSCRRQAAGQRDLRTPDQDSKEL 92
+S +SS R+ GQRDL PD ++L
Sbjct: 753 ISASSSTSRRRQGQRDLELPDMHMRDL 779
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 27.7 bits (60), Expect = 2.1
Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 10/93 (10%)
Query: 3 TASLPGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAA----- 57
T S P P+P+ + +G + ++ I E+ +G ++ E +R ++ R+
Sbjct: 263 TPSPPPPIPEDIALGKKYKEKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQ 322
Query: 58 -----TDRAGCLGVSEASSCRRQAAGQRDLRTP 85
+ R SS +R + R RTP
Sbjct: 323 HHSPISSRHHSSSSQSGSSIQRHSPSPRRKRTP 355
>gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 27.3 bits (59), Expect = 2.7
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 6 LPGPLPQVVRV--GNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDRAGC 63
LP P P V R G E+ RH A + + E + +E +ER A+ +
Sbjct: 152 LPPPEPPVKRRARGVLESSRHAAPRRVFHLGREREQSQEVAPLAGPCMAKERKASSVSAE 211
Query: 64 LGVSEASSCRRQ 75
G EASS RR+
Sbjct: 212 DGYMEASSGRRK 223
>gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 27.3 bits (59), Expect = 2.7
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 6 LPGPLPQVVRV--GNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDRAGC 63
LP P P V R G E+ RH A + + E + +E +ER A+ +
Sbjct: 152 LPPPEPPVKRRARGVLESSRHAAPRRVFHLGREREQSQEVAPLAGPCMAKERKASSVSAE 211
Query: 64 LGVSEASSCRRQ 75
G EASS RR+
Sbjct: 212 DGYMEASSGRRK 223
>gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Homo
sapiens]
Length = 1614
Score = 27.3 bits (59), Expect = 2.7
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 6 LPGPLPQVVRV--GNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDRAGC 63
LP P P V R G E+ RH A + + E + +E +ER A+ +
Sbjct: 152 LPPPEPPVKRRARGVLESSRHAAPRRVFHLGREREQSQEVAPLAGPCMAKERKASSVSAE 211
Query: 64 LGVSEASSCRRQ 75
G EASS RR+
Sbjct: 212 DGYMEASSGRRK 223
>gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo
sapiens]
Length = 470
Score = 26.9 bits (58), Expect = 3.6
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 14/86 (16%)
Query: 4 ASLPGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKR----WASERERAATD 59
ASLP P+P RVG + R + +++ E E E E K W A D
Sbjct: 335 ASLPNPIPPGSRVGAGGSERQNSKRIVYAGPGELRELVEVGEPKSDPLLW-----EAGLD 389
Query: 60 RAGCLGVSEASSCRRQAAGQRDLRTP 85
RA LG+ RR+ A D P
Sbjct: 390 RAQVLGLR-----RRKTAHALDAAPP 410
>gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo
sapiens]
Length = 470
Score = 26.9 bits (58), Expect = 3.6
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 14/86 (16%)
Query: 4 ASLPGPLPQVVRVGNQEAPRHGATQVIMEQREEGLEQRECLEAKR----WASERERAATD 59
ASLP P+P RVG + R + +++ E E E E K W A D
Sbjct: 335 ASLPNPIPPGSRVGAGGSERQNSKRIVYAGPGELRELVEVGEPKSDPLLW-----EAGLD 389
Query: 60 RAGCLGVSEASSCRRQAAGQRDLRTP 85
RA LG+ RR+ A D P
Sbjct: 390 RAQVLGLR-----RRKTAHALDAAPP 410
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 26.6 bits (57), Expect = 4.7
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 19 QEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDRAGCLGVSEASSCRRQAAG 78
Q+ + + + +Q+ +Q E L + W + ERA G + S+ ++ +
Sbjct: 2036 QQMEQEALVKTLQKQQNTCHQQLEDLCS--WVGQAERALAGHQGRTTQQDLSALQKNQSD 2093
Query: 79 QRDLRTPDQDSKELNATTQPDLDG 102
+DL+ Q+ AT D++G
Sbjct: 2094 LKDLQDDIQNRATSFATVVKDIEG 2117
>gi|28466983 leprecan-like 2 [Homo sapiens]
Length = 736
Score = 26.6 bits (57), Expect = 4.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 84 TPDQDSKELNATTQPDLDGICSWVQNGTLIKINLD 118
T QDS++LN + + LDG+ + + G L+++ D
Sbjct: 453 TLTQDSRQLNGSERAVLDGLLTPAECGVLLQLAKD 487
>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
Length = 1317
Score = 26.6 bits (57), Expect = 4.7
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 16 VGNQEAPRHGATQVIMEQREEGLEQRECLEAKRWASERERAATDRAGCLGVSEASSCRRQ 75
+ QE + I+E RE+ +QRE LE ER +A R LG+ E R++
Sbjct: 979 IARQEEKVRKKEKEILESREK--QQREALERALARLERRHSALQRHSTLGM-EIEEQRQK 1035
Query: 76 AAGQRDLRTPDQDSKELNATTQPDLDGI 103
A L + ++ L A+ + + + +
Sbjct: 1036 LA---SLNSGSREQSGLQASLEAEQEAL 1060
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,879,859
Number of Sequences: 37866
Number of extensions: 189542
Number of successful extensions: 560
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 536
Number of HSP's gapped (non-prelim): 47
length of query: 119
length of database: 18,247,518
effective HSP length: 88
effective length of query: 31
effective length of database: 14,915,310
effective search space: 462374610
effective search space used: 462374610
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.