Guide to the Human Genome
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Search of human proteins with 194097446

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|194097446 RELT-like 2 [Homo sapiens]
         (303 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|194097448 RELT-like 2 [Homo sapiens]                               627   e-180
gi|194097446 RELT-like 2 [Homo sapiens]                               627   e-180
gi|146094508 receptor expressed in lymphoid tissues like 1 [Homo...   106   2e-23
gi|146094506 receptor expressed in lymphoid tissues like 1 [Homo...   106   2e-23
gi|23238200 RELT tumor necrosis factor receptor precursor [Homo ...    84   2e-16
gi|21361873 RELT tumor necrosis factor receptor precursor [Homo ...    84   2e-16
gi|4504733 insulin receptor substrate 4 [Homo sapiens]                 44   1e-04
gi|148727370 immediate early response 5-like [Homo sapiens]            43   3e-04
gi|58331179 KIAA1688 protein [Homo sapiens]                            41   0.001
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ...    40   0.002
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ...    40   0.002
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    40   0.003
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    40   0.003
gi|14149675 cleavage stimulation factor, 3' pre-RNA, subunit 2, ...    40   0.003
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin...    40   0.003
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]             39   0.004
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    39   0.007
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]                38   0.010
gi|112789555 ADAM metallopeptidase with thrombospondin type 1 mo...    38   0.010
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]     38   0.013
gi|61835232 growth differentiation factor 7 preproprotein [Homo ...    38   0.013
gi|48762934 alpha 2 type I collagen [Homo sapiens]                     37   0.017
gi|45439359 triple functional domain (PTPRF interacting) [Homo s...    37   0.017
gi|238908524 hypothetical protein LOC389333 [Homo sapiens]             37   0.022
gi|4557743 Mediterranean fever protein [Homo sapiens]                  37   0.022
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      37   0.022
gi|239748995 PREDICTED: hypothetical protein XP_002346877 [Homo ...    37   0.022
gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapi...    37   0.022
gi|157785645 SPEG complex locus [Homo sapiens]                         37   0.022
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re...    37   0.022

>gi|194097448 RELT-like 2 [Homo sapiens]
          Length = 303

 Score =  627 bits (1616), Expect = e-180
 Identities = 303/303 (100%), Positives = 303/303 (100%)

Query: 1   MSEPQPDLEPPQHGLYMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSRGSEPDDAQLQ 60
           MSEPQPDLEPPQHGLYMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSRGSEPDDAQLQ
Sbjct: 1   MSEPQPDLEPPQHGLYMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSRGSEPDDAQLQ 60

Query: 61  PPEDDDMNEDTVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVDATSSLQDGAPSH 120
           PPEDDDMNEDTVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVDATSSLQDGAPSH
Sbjct: 61  PPEDDDMNEDTVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVDATSSLQDGAPSH 120

Query: 121 HHTVHLGSAAPCLHCSRSKRPPLVRQGRSKEGKSRPRTGETTVFSVGRFRVTHIEKRYGL 180
           HHTVHLGSAAPCLHCSRSKRPPLVRQGRSKEGKSRPRTGETTVFSVGRFRVTHIEKRYGL
Sbjct: 121 HHTVHLGSAAPCLHCSRSKRPPLVRQGRSKEGKSRPRTGETTVFSVGRFRVTHIEKRYGL 180

Query: 181 HEHRDGSPTDRSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNG 240
           HEHRDGSPTDRSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNG
Sbjct: 181 HEHRDGSPTDRSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNG 240

Query: 241 GLRDSSLTPRALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKPDTSDHQVSLPQGA 300
           GLRDSSLTPRALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKPDTSDHQVSLPQGA
Sbjct: 241 GLRDSSLTPRALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKPDTSDHQVSLPQGA 300

Query: 301 GSM 303
           GSM
Sbjct: 301 GSM 303


>gi|194097446 RELT-like 2 [Homo sapiens]
          Length = 303

 Score =  627 bits (1616), Expect = e-180
 Identities = 303/303 (100%), Positives = 303/303 (100%)

Query: 1   MSEPQPDLEPPQHGLYMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSRGSEPDDAQLQ 60
           MSEPQPDLEPPQHGLYMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSRGSEPDDAQLQ
Sbjct: 1   MSEPQPDLEPPQHGLYMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSRGSEPDDAQLQ 60

Query: 61  PPEDDDMNEDTVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVDATSSLQDGAPSH 120
           PPEDDDMNEDTVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVDATSSLQDGAPSH
Sbjct: 61  PPEDDDMNEDTVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVDATSSLQDGAPSH 120

Query: 121 HHTVHLGSAAPCLHCSRSKRPPLVRQGRSKEGKSRPRTGETTVFSVGRFRVTHIEKRYGL 180
           HHTVHLGSAAPCLHCSRSKRPPLVRQGRSKEGKSRPRTGETTVFSVGRFRVTHIEKRYGL
Sbjct: 121 HHTVHLGSAAPCLHCSRSKRPPLVRQGRSKEGKSRPRTGETTVFSVGRFRVTHIEKRYGL 180

Query: 181 HEHRDGSPTDRSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNG 240
           HEHRDGSPTDRSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNG
Sbjct: 181 HEHRDGSPTDRSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNG 240

Query: 241 GLRDSSLTPRALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKPDTSDHQVSLPQGA 300
           GLRDSSLTPRALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKPDTSDHQVSLPQGA
Sbjct: 241 GLRDSSLTPRALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKPDTSDHQVSLPQGA 300

Query: 301 GSM 303
           GSM
Sbjct: 301 GSM 303


>gi|146094508 receptor expressed in lymphoid tissues like 1 [Homo
           sapiens]
          Length = 271

 Score =  106 bits (265), Expect = 2e-23
 Identities = 75/190 (39%), Positives = 101/190 (53%), Gaps = 19/190 (10%)

Query: 13  HGLYMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSRGSEPDDAQLQPPEDDDM---NE 69
           H  Y+ + LV VFF+MGL G +ICH+LKKKGYRC T    + ++ +++  E +D    N 
Sbjct: 55  HPEYIAYALVPVFFIMGLFGVLICHLLKKKGYRCTTEAEQDIEEEKVEKIELNDSVNENS 114

Query: 70  DTVERIVRCIIQNEANAEALKEMLGDS---EGEGTVQLSS-----VDATSSLQDGAPSHH 121
           DTV +IV  I++NEANA+ LK M+ D+   + E  V  S+     V        G P  H
Sbjct: 115 DTVGQIVHYIMKNEANADVLKAMVADNSLYDPESPVTPSTPGSPPVSPGPLSPGGTPGKH 174

Query: 122 ------HTVHLGSAAPCLHCSRSKRPPLVRQGRSKEGKSRP-RTGETTVFSVGRFRVTHI 174
                 HTV         H  R KR   ++   +K  +SRP R GE TV SVGRFRVT +
Sbjct: 175 VCGHHLHTVGGVVERDVCHRCRHKRWHFIKP-TNKSRESRPRRQGEVTVLSVGRFRVTKV 233

Query: 175 EKRYGLHEHR 184
           E +    E R
Sbjct: 234 EHKSNQKERR 243


>gi|146094506 receptor expressed in lymphoid tissues like 1 [Homo
           sapiens]
          Length = 271

 Score =  106 bits (265), Expect = 2e-23
 Identities = 75/190 (39%), Positives = 101/190 (53%), Gaps = 19/190 (10%)

Query: 13  HGLYMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSRGSEPDDAQLQPPEDDDM---NE 69
           H  Y+ + LV VFF+MGL G +ICH+LKKKGYRC T    + ++ +++  E +D    N 
Sbjct: 55  HPEYIAYALVPVFFIMGLFGVLICHLLKKKGYRCTTEAEQDIEEEKVEKIELNDSVNENS 114

Query: 70  DTVERIVRCIIQNEANAEALKEMLGDS---EGEGTVQLSS-----VDATSSLQDGAPSHH 121
           DTV +IV  I++NEANA+ LK M+ D+   + E  V  S+     V        G P  H
Sbjct: 115 DTVGQIVHYIMKNEANADVLKAMVADNSLYDPESPVTPSTPGSPPVSPGPLSPGGTPGKH 174

Query: 122 ------HTVHLGSAAPCLHCSRSKRPPLVRQGRSKEGKSRP-RTGETTVFSVGRFRVTHI 174
                 HTV         H  R KR   ++   +K  +SRP R GE TV SVGRFRVT +
Sbjct: 175 VCGHHLHTVGGVVERDVCHRCRHKRWHFIKP-TNKSRESRPRRQGEVTVLSVGRFRVTKV 233

Query: 175 EKRYGLHEHR 184
           E +    E R
Sbjct: 234 EHKSNQKERR 243


>gi|23238200 RELT tumor necrosis factor receptor precursor [Homo
           sapiens]
          Length = 430

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 76/255 (29%), Positives = 110/255 (43%), Gaps = 46/255 (18%)

Query: 16  YMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSR----GSEPDDAQLQPP-EDDDMNED 70
           Y +  +V VF LMGL+G ++C++LK+KGY C   +    G     + + P    +D NED
Sbjct: 163 YAVIAIVPVFCLMGLLGILVCNLLKRKGYHCTAHKEVGPGPGGGGSGINPAYRTEDANED 222

Query: 71  TVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVDATSSLQDGAPS------HHHTV 124
           T+  +VR I + + NA AL+E+L +   +  VQ +S    S L    P+      H H +
Sbjct: 223 TIGVLVRLITEKKENAAALEELLKEYHSKQLVQ-TSHRPVSKLPPAPPNVPHICPHRHHL 281

Query: 125 HLG------SAAPCLHCSRSKRPPLVRQGRS------------------KEGKSRPRTGE 160
           H        S   C  CS+ K P ++    +                  K G    R GE
Sbjct: 282 HTVQGLASLSGPCCSRCSQKKWPEVLLSPEAVAATTPVPSLLPNPTRVPKAGAKAGRQGE 341

Query: 161 TTVFSVGRFRVTHI-EKRYG--LHEHRDGSPTDRSWGS-------GGGQDPGGGQGSGGG 210
            T+ SVGRFRV  I E+R    + E +  +    SWG        G   +     GSGG 
Sbjct: 342 ITILSVGRFRVARIPEQRTSSMVSEVKTITEAGPSWGDLPDSPQPGLPPEQQALLGSGGS 401

Query: 211 QPKAGMPAMERLPPE 225
           + K   P  E    E
Sbjct: 402 RTKWLKPPAENKAEE 416


>gi|21361873 RELT tumor necrosis factor receptor precursor [Homo
           sapiens]
          Length = 430

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 76/255 (29%), Positives = 110/255 (43%), Gaps = 46/255 (18%)

Query: 16  YMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSR----GSEPDDAQLQPP-EDDDMNED 70
           Y +  +V VF LMGL+G ++C++LK+KGY C   +    G     + + P    +D NED
Sbjct: 163 YAVIAIVPVFCLMGLLGILVCNLLKRKGYHCTAHKEVGPGPGGGGSGINPAYRTEDANED 222

Query: 71  TVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVDATSSLQDGAPS------HHHTV 124
           T+  +VR I + + NA AL+E+L +   +  VQ +S    S L    P+      H H +
Sbjct: 223 TIGVLVRLITEKKENAAALEELLKEYHSKQLVQ-TSHRPVSKLPPAPPNVPHICPHRHHL 281

Query: 125 HLG------SAAPCLHCSRSKRPPLVRQGRS------------------KEGKSRPRTGE 160
           H        S   C  CS+ K P ++    +                  K G    R GE
Sbjct: 282 HTVQGLASLSGPCCSRCSQKKWPEVLLSPEAVAATTPVPSLLPNPTRVPKAGAKAGRQGE 341

Query: 161 TTVFSVGRFRVTHI-EKRYG--LHEHRDGSPTDRSWGS-------GGGQDPGGGQGSGGG 210
            T+ SVGRFRV  I E+R    + E +  +    SWG        G   +     GSGG 
Sbjct: 342 ITILSVGRFRVARIPEQRTSSMVSEVKTITEAGPSWGDLPDSPQPGLPPEQQALLGSGGS 401

Query: 211 QPKAGMPAMERLPPE 225
           + K   P  E    E
Sbjct: 402 RTKWLKPPAENKAEE 416


>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
          Length = 1257

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 20/28 (71%), Positives = 20/28 (71%)

Query: 184 RDGSPTDRSWGSGGGQDPGGGQGSGGGQ 211
           RDG  T    GSGGGQ PGGG GSGGGQ
Sbjct: 547 RDGQGTAGGHGSGGGQRPGGGHGSGGGQ 574



 Score = 37.4 bits (85), Expect = 0.017
 Identities = 18/37 (48%), Positives = 19/37 (51%)

Query: 179 GLHEHRDGSPTDRSWGSGGGQDPGGGQGSGGGQPKAG 215
           G H    G       GSGGGQ PG G GSGGG+   G
Sbjct: 554 GGHGSGGGQRPGGGHGSGGGQGPGDGHGSGGGKNSGG 590



 Score = 35.0 bits (79), Expect = 0.082
 Identities = 40/166 (24%), Positives = 55/166 (33%), Gaps = 37/166 (22%)

Query: 94  GDSEGEGTVQLSSVDATSSLQDGAPSHHHTVHLGSAAPCLHCSRSKRPPLVRQGRSKEGK 153
           G+  G G  Q S+   +SS            H      C    +  R      G+   G 
Sbjct: 496 GNGRGSGGGQGSNGQGSSS------------HSSGGNQCSGEGQGSRGGQGSNGQGSGGN 543

Query: 154 SRPRTGETTVFSVGRFRVTHIEKRYGLHEHRDGSPTDRSWGSGGGQDPGGGQGSGGGQPK 213
              R G+ T    G       ++  G H    G       GSGGG++ GGG+GSG G+  
Sbjct: 544 QCSRDGQGTAGGHGSGGG---QRPGGGHGSGGGQGPGDGHGSGGGKNSGGGKGSGSGKGS 600

Query: 214 AG------------------MPAMERLPPERPQPQVLASPPVQNGG 241
            G                      +++PP  P P     PP   GG
Sbjct: 601 DGDGERGKSLKKRSYFGKLTQSKQQQMPPPPPPP----PPPPPAGG 642



 Score = 33.9 bits (76), Expect = 0.18
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 4/32 (12%)

Query: 182 EHRDGSPTD----RSWGSGGGQDPGGGQGSGG 209
           E ++GS  D     +WGSG G+  GGGQGS G
Sbjct: 478 EDQEGSGGDYMPMNNWGSGNGRGSGGGQGSNG 509


>gi|148727370 immediate early response 5-like [Homo sapiens]
          Length = 404

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 52/207 (25%), Positives = 76/207 (36%), Gaps = 29/207 (14%)

Query: 114 QDGAPSHHHTVHLGSAAPCLHCSRSKRPPLVRQGRSKEGKSRPRTGETTVFSVGRFRVTH 173
           Q   P HH   HL  AAP +  S +   PL + G   + ++R       +  + +    H
Sbjct: 63  QQQQPPHHQHQHLAYAAPGMPASAADFGPL-QLGGGGDAEAREPAARHQLHQLHQLHQLH 121

Query: 174 IEKRYGLHEHRDGSPTDRSWGSGGGQDPGGG------QGSGGGQPKAGMP----AMERLP 223
           ++++  LH+H+  +P   +  +  G   GG        G    QP  G P     +E L 
Sbjct: 122 LQQQ--LHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQ 179

Query: 224 PERPQPQVLASPPVQNGGL--RD----------SSLTPRALEGNPRASAEPTLRAG---G 268
           P  P P  L  PP     L  RD              P A   +P AS  P    G   G
Sbjct: 180 P-GPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRG 238

Query: 269 RGPSPGLPTQEANGQPSKPDTSDHQVS 295
             P+P       + Q +  D   H V+
Sbjct: 239 AYPTPSDFGLHCSSQTTVLDLDTHVVT 265


>gi|58331179 KIAA1688 protein [Homo sapiens]
          Length = 1114

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 18/176 (10%)

Query: 112 SLQDGAPSHHHTVHLGSAAPCLHCSRSKRP----PLVRQGRSKEGKSRPRTGETTVFSVG 167
           SLQ  AP    T+      P     R++ P    PL+ Q R   G S+P +     +   
Sbjct: 253 SLQTFAPEADGTIFFPERRPSPFLKRAELPGSSSPLLAQPRKPSGDSQPSSPRYG-YEPP 311

Query: 168 RFRVTHIEKRYGLHEHRDGSPTDRSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERP 227
            +    +E +  ++   D  P D  + +GGG   G  Q S G +P+  +   ++ PP   
Sbjct: 312 LYEEPPVEYQAPIY---DEPPMDVQFEAGGGYQAGSPQRSPGRKPRPFLQPNKQGPPSPC 368

Query: 228 QPQVLASPPVQNGGLRDSSLTP------RALEGNPRASAEPTLRAGGR---GPSPG 274
           Q  VL         L     +P      R L    +A + P LRAG R    P+PG
Sbjct: 369 QQLVLTKQKCPERFL-SLEYSPAGKEYVRQLVYVEQAGSSPKLRAGPRHKYAPNPG 423


>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
           sapiens]
          Length = 594

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 33/117 (28%), Positives = 43/117 (36%), Gaps = 15/117 (12%)

Query: 176 KRYGLHEHRDGSPTD---RSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVL 232
           +R G    R GS      R WG G G+ P GG+   G   + G  A    P     P++ 
Sbjct: 441 QRAGRARARTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELP 500

Query: 233 ASPPVQNGGLRDSSLTPRALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKPDT 289
           A  P             R     P A+A+ T   G  G  PG P     G   +PD+
Sbjct: 501 AVDPA------------RDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRPRPDS 545


>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
           sapiens]
          Length = 594

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 33/117 (28%), Positives = 43/117 (36%), Gaps = 15/117 (12%)

Query: 176 KRYGLHEHRDGSPTD---RSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVL 232
           +R G    R GS      R WG G G+ P GG+   G   + G  A    P     P++ 
Sbjct: 441 QRAGRARARTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELP 500

Query: 233 ASPPVQNGGLRDSSLTPRALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKPDT 289
           A  P             R     P A+A+ T   G  G  PG P     G   +PD+
Sbjct: 501 AVDPA------------RDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRPRPDS 545


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 16/84 (19%)

Query: 195 SGGGQDPGGGQGSGGGQPKAGMPAMERLPPERP----QPQVLASPPVQNGGLRDSSLTPR 250
           SG G+ P    G   G P+   P   R+PP RP    +P  +  PPV +        TPR
Sbjct: 145 SGPGRFPVPSPGHRSGPPE---PQRNRMPPPRPDVGSKPDSIP-PPVPS--------TPR 192

Query: 251 ALEGNPRASAEPTLRAGGRGPSPG 274
            ++ +P     P +  G R PSPG
Sbjct: 193 PIQSSPHNRGSPPVPGGPRQPSPG 216



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 37/115 (32%), Positives = 47/115 (40%), Gaps = 14/115 (12%)

Query: 193 WGSGGGQDPGGGQGSGGGQPKAGMPAMERL-PPERPQPQVLASPPVQNGGLRDSSLTPRA 251
           +G GGG   GGG G GG     G P +  L     P+ +  A+    +GG R   L P  
Sbjct: 74  FGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPP-- 131

Query: 252 LEGNPRASAEPTLRAGGRG----PSP----GLPTQEANGQ-PSKPDTSDHQVSLP 297
             G    SA+P     G G    PSP    G P  + N   P +PD      S+P
Sbjct: 132 --GGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIP 184



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 10/76 (13%)

Query: 223 PPERPQPQVLASPPVQNGGL-------RDSSLTPRALEGNPRASAEPTLRAGGRGPSPGL 275
           P ERP P V   PP ++G L       R+ S T RAL   P+  +   + +   GP P L
Sbjct: 361 PSERPPPPV-RDPPGRSGPLPPPPPVSRNGS-TSRALPATPQLPSRSGVDSPRSGPRPPL 418

Query: 276 PTQEAN-GQPSKPDTS 290
           P    + G P  P  S
Sbjct: 419 PPDRPSAGAPPPPPPS 434


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 16/84 (19%)

Query: 195 SGGGQDPGGGQGSGGGQPKAGMPAMERLPPERP----QPQVLASPPVQNGGLRDSSLTPR 250
           SG G+ P    G   G P+   P   R+PP RP    +P  +  PPV +        TPR
Sbjct: 145 SGPGRFPVPSPGHRSGPPE---PQRNRMPPPRPDVGSKPDSIP-PPVPS--------TPR 192

Query: 251 ALEGNPRASAEPTLRAGGRGPSPG 274
            ++ +P     P +  G R PSPG
Sbjct: 193 PIQSSPHNRGSPPVPGGPRQPSPG 216



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 37/115 (32%), Positives = 47/115 (40%), Gaps = 14/115 (12%)

Query: 193 WGSGGGQDPGGGQGSGGGQPKAGMPAMERL-PPERPQPQVLASPPVQNGGLRDSSLTPRA 251
           +G GGG   GGG G GG     G P +  L     P+ +  A+    +GG R   L P  
Sbjct: 74  FGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPP-- 131

Query: 252 LEGNPRASAEPTLRAGGRG----PSP----GLPTQEANGQ-PSKPDTSDHQVSLP 297
             G    SA+P     G G    PSP    G P  + N   P +PD      S+P
Sbjct: 132 --GGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIP 184



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 10/76 (13%)

Query: 223 PPERPQPQVLASPPVQNGGL-------RDSSLTPRALEGNPRASAEPTLRAGGRGPSPGL 275
           P ERP P V   PP ++G L       R+ S T RAL   P+  +   + +   GP P L
Sbjct: 361 PSERPPPPV-RDPPGRSGPLPPPPPVSRNGS-TSRALPATPQLPSRSGVDSPRSGPRPPL 418

Query: 276 PTQEAN-GQPSKPDTS 290
           P    + G P  P  S
Sbjct: 419 PPDRPSAGAPPPPPPS 434


>gi|14149675 cleavage stimulation factor, 3' pre-RNA, subunit 2,
           64kDa, tau variant [Homo sapiens]
          Length = 616

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 17/115 (14%)

Query: 201 PGGGQGS----GGGQPKAGMPAMERLPPERPQPQVLASP--PVQNGGLRDSSLTPRALEG 254
           PG G GS    G  QP+ GMP +  +P ER Q Q ++ P  P+  G +    L PR L G
Sbjct: 273 PGAGPGSLTPGGAMQPQLGMPGVGPVPLERGQVQ-MSDPRAPIPRGPVTPGGLPPRGLLG 331

Query: 255 ----NPRASA--EPTLRAGGRG----PSPGLPTQEANGQPSKPDTSDHQVSLPQG 299
               +PR       T     RG    P  G P   A+G  ++  +S      P G
Sbjct: 332 DAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHASGHDTRGPSSHEMRGGPLG 386



 Score = 32.0 bits (71), Expect = 0.69
 Identities = 29/102 (28%), Positives = 37/102 (36%), Gaps = 16/102 (15%)

Query: 202 GGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQN----------GGLRDSSLTPRA 251
           G G G G G        + +  P  PQPQ LA  PV++          GG+      P A
Sbjct: 212 GPGPGPGPGLCPGPNVLLNQQNPPAPQPQHLARRPVKDIPPLMQTPIQGGIPAPGPIPAA 271

Query: 252 LEG------NPRASAEPTLRAGGRGPSPGLPTQEANGQPSKP 287
           + G       P  + +P L   G GP P    Q     P  P
Sbjct: 272 VPGAGPGSLTPGGAMQPQLGMPGVGPVPLERGQVQMSDPRAP 313


>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
           isoform a [Homo sapiens]
          Length = 1749

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 31/108 (28%), Positives = 40/108 (37%), Gaps = 11/108 (10%)

Query: 201 PGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDSSLTPRALEGNPRASA 260
           P G   +  G P    P      P    P     P V +GGLR  +L P      PR   
Sbjct: 770 PEGASSAAPGSPVPAPPTKASALPVEQGPAEPIPPGVASGGLRPDALGPTTAHHGPRHPP 829

Query: 261 EP-----TLRAGGRGPSPG-LPTQEANGQ-----PSKPDTSDHQVSLP 297
           +P     T R G     PG  P  E + Q     P +P  +D ++ LP
Sbjct: 830 KPPRSKATERPGQEPEGPGATPAGERDDQSPDSVPERPRPADRRLCLP 877


>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
          Length = 340

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 11/104 (10%)

Query: 197 GGQDPGGGQGSGGGQPKAGM---PAM-------ERLPPERPQPQVLASPPVQNGGLRDSS 246
           G   PGGG     G+P AG    PA          LP   P    +  P   N  +  + 
Sbjct: 38  GPAPPGGGSSDAAGKPPAGALGTPAAAAANELNNNLPGGAPAAPAVPGPGGVNCAVGSAM 97

Query: 247 LTPRALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKPDTS 290
           LT RA  G  R+  EP   +    P P    +E +G P K  +S
Sbjct: 98  LT-RAAPGPRRSEDEPPAASASAAPPPQRDEEEPDGVPEKGKSS 140


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 46/169 (27%), Positives = 63/169 (37%), Gaps = 30/169 (17%)

Query: 118  PSHHHTVHLGSAAPCLHCSRSKRPPLVRQGRSKEGKSRPRTGETTVFSVGRFRVTHIEKR 177
            P HHH  H     P  H +    PP +  G S +    PR       S+  +       R
Sbjct: 1000 PPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPP-PRLALGPQPSLRGW-------R 1051

Query: 178  YGLHEHRDGSPTDRSWGSGGGQDPGGGQGSGGGQPKAGMPAME--RLPPERPQPQVLASP 235
             G      G+P+    GS GG   GGG   G        PA+   +LPP R     +  P
Sbjct: 1052 GGGPSPTPGAPSPSHHGSAGG---GGGSSQG--------PALRYFQLPP-RAASAAMYVP 1099

Query: 236  PVQNGGLRDSSLTPRALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQP 284
                 G +   +    +EG P+       + GG  P+P  PT  A+ QP
Sbjct: 1100 ARSGRGRKGPLVKQTKVEGEPQ-------KGGGLPPAPS-PTSPASPQP 1140



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 200  DPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDSSLTPRALEGNPR 257
            +P GG G GGG   +  PAM  +PP  P P    + P     L  +S    AL G  R
Sbjct: 1186 EPTGG-GGGGGSSPSPAPAMSPVPPS-PSPVPTPASPSGPATLDFTSQFGAALVGAAR 1241


>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
          Length = 424

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 34/110 (30%), Positives = 39/110 (35%), Gaps = 14/110 (12%)

Query: 196 GGGQDPGGGQGS-------GGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDSSLT 248
           GG   PG  Q         G G P AG P     PP RP P +    P   G      + 
Sbjct: 299 GGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMG------MP 352

Query: 249 PRALE-GNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKPDTSDHQVSLP 297
           PR    G+P     P    G RGP P +P     G P  P     +  LP
Sbjct: 353 PRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLP 402



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 208 GGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDSSLTPRALEGNPRASAEPTLRAG 267
           G G P  GMP     PP  P P  L  PP     +    + P A    P ++  P     
Sbjct: 229 GSGLPPPGMPPPGSFPPPVPPPGAL--PPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHP 286

Query: 268 GRGPS 272
           G G S
Sbjct: 287 GHGHS 291


>gi|112789555 ADAM metallopeptidase with thrombospondin type 1
           motif, 19 preproprotein [Homo sapiens]
          Length = 1207

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 34/114 (29%), Positives = 44/114 (38%), Gaps = 20/114 (17%)

Query: 188 PTDRSWGSGGGQDPGGGQGSGGGQPKAGMPA--------MERLPPERP---QPQVLASPP 236
           P D + GSGG  DPG  +G GGG       A        +  +P E P   + +    PP
Sbjct: 47  PVDPAGGSGGSADPGWVRGVGGGGSARAQAAGSSREVRSVAPVPLEEPVEGRSESRLRPP 106

Query: 237 VQNGGLRDSSLTPRALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKPDTS 290
             + G  D  L  + L   PR S      +G    SPG P       P +P  S
Sbjct: 107 PPSEGEEDEELESQEL---PRGS------SGAAALSPGAPASWQPPPPPQPPPS 151


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 15/113 (13%)

Query: 192  SWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDSSLT--P 249
            SW S G + P  G       P A +P M R PP   QP     P +QN   + SS    P
Sbjct: 1544 SWPSHGTRQPPYG-------PSAPVPPMTRPPPSNYQP----PPSMQNHIPQVSSPAPLP 1592

Query: 250  RALEGNPRASAEPTLRAGGR--GPSPGLPTQEANGQPSKPDTSDHQVSLPQGA 300
            R +E     S  P L +G +     P +P       P +P      ++ P G+
Sbjct: 1593 RPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPVQPPMIRRDITFPPGS 1645



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 9/86 (10%)

Query: 215  GMPAMERLPPERPQP---QVLASPPVQNGGLRDSSLTPRALEGNPRASAEPTLRAGGRGP 271
            G P  ++LPP +PQP   Q  A P  Q                 P  +   T R    GP
Sbjct: 1398 GQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYG------NAYPATATAATERRPAGGP 1451

Query: 272  SPGLPTQEANGQPSKPDTSDHQVSLP 297
                P Q    + S P  ++ Q ++P
Sbjct: 1452 QNQFPFQFGRDRVSAPPGTNAQQNMP 1477



 Score = 30.0 bits (66), Expect = 2.6
 Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 204 GQGSGGGQPKAGMPA----MERLPPERPQPQVLASPPVQNGGLRDSSLTPRALEGNPRAS 259
           G   GGGQP A  P     M+++   RPQP    +P  Q  G            G P  S
Sbjct: 365 GSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGS 424

Query: 260 AEP 262
             P
Sbjct: 425 QTP 427


>gi|61835232 growth differentiation factor 7 preproprotein [Homo
           sapiens]
          Length = 450

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 9/108 (8%)

Query: 191 RSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDSSLTP- 249
           R+ G+G  + PGGG G GGG       A     P    P+  A+      G R+ S+ P 
Sbjct: 30  RAAGAGPVRSPGGGGGGGGGGRTLAQAAGAAAVPAAAVPRARAARRAAGSGFRNGSVVPH 89

Query: 250 -------RALEGNPRASAEPTLRAG-GRGPSPGLPTQEANGQPSKPDT 289
                  R+L G   A A     +G GR  +    T +A    S  +T
Sbjct: 90  HFMMSLYRSLAGRAPAGAAAVSASGHGRADTITGFTDQATQDESAAET 137


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 40/114 (35%), Positives = 48/114 (42%), Gaps = 11/114 (9%)

Query: 179 GLHEHRDGSPTDRSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLP-PERPQPQVLASPPV 237
           GL   R     D + G+ G   P G QG  G Q   G P  + LP P  P  +V    P 
Sbjct: 514 GLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEV--GKPG 571

Query: 238 QNGGLRDSSLT----PRALEGNPRAS--AEPTLRAGGRGPSPGLPTQEAN-GQP 284
           + G   +  L     PR   G P  S  A PT   G RGPS G P  + N G+P
Sbjct: 572 ERGLHGEFGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPS-GPPGPDGNKGEP 624



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 29/102 (28%), Positives = 36/102 (35%), Gaps = 11/102 (10%)

Query: 194 GSGGGQDPGGGQGSGGGQPKAGMPAMERLPPER-----PQPQVLASPPVQNGGLRDSSLT 248
           G+ G   P G  G  G +   G P M   P        P P  ++ PP   G      L 
Sbjct: 760 GAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLR 819

Query: 249 -PRALEGNPRASAE-----PTLRAGGRGPSPGLPTQEANGQP 284
            PR  +G    + E     P   AG +GPS    T    G P
Sbjct: 820 GPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAGPPGTP 861


>gi|45439359 triple functional domain (PTPRF interacting) [Homo
            sapiens]
          Length = 3097

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 35/100 (35%), Positives = 37/100 (37%), Gaps = 11/100 (11%)

Query: 183  HRDGSPTDRSWGSGGGQDPGGGQG-------SGGGQPKAGMPAMERLPPER-PQPQVLAS 234
            H  G     S GSGGG   GGG         SGG     G P+  R  P R PQP V   
Sbjct: 2290 HSGGGGGGGSGGSGGGGGSGGGGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQP-VRHH 2348

Query: 235  PPVQNGGLRDSSLTPRALEG--NPRASAEPTLRAGGRGPS 272
            PPV       S      + G   P  S  P   A   GPS
Sbjct: 2349 PPVLVSSAASSQAEADKMSGTSTPGPSLPPPGAAPEAGPS 2388


>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
          Length = 1015

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 10/92 (10%)

Query: 194 GSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDSSLTPRALE 253
           G  G + P  G       P  G+    + PP  P+P      P+    L   +L  R   
Sbjct: 792 GPAGVRSPRPGSPQMQASPSPGIAPKPKTPPTAPEPAAAVQAPLPREPL---ALAGRTAP 848

Query: 254 GNPR-ASAEPTLRAGGRGPSPGLPTQEANGQP 284
             PR ASA PT R      SP  P+Q A  QP
Sbjct: 849 AQPRAASAPPTDR------SPQSPSQGARRQP 874


>gi|4557743 Mediterranean fever protein [Homo sapiens]
          Length = 781

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 16/151 (10%)

Query: 152 GKSRPRTGETTVFSVGRFRVTHIEKRYGLHEHRDGSPTDRSWGSGGGQDPGGGQGS---- 207
           GK RPR+ E T+ S G     + E    L E +  +  D +        P GG  +    
Sbjct: 236 GKMRPRSLEVTI-STGEKAPANPEILLTLEE-KTAANLDSATEPRARPTPDGGASADLKE 293

Query: 208 GGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDSSLTPRALEGNPRASAEPTLRAG 267
           G G P+  +          P+       PV    +RDS   P A+ G+P+AS       G
Sbjct: 294 GPGNPEHSVTGRPPDTAASPRCHAQEGDPVDGTCVRDSCSFPEAVSGHPQAS-------G 346

Query: 268 GRGPSPGLPTQEANGQPSKPDTSDHQVSLPQ 298
            R  SPG P  + + +   P +   Q  LPQ
Sbjct: 347 SR--SPGCPRCQDSHERKSPGSLSPQ-PLPQ 374


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 33/102 (32%), Positives = 38/102 (37%), Gaps = 11/102 (10%)

Query: 194 GSGGGQDPGGGQGSGG--------GQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDS 245
           G  G   PGG +G  G        G P  G P  E   P  P P+  A  P   GG  D+
Sbjct: 618 GPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDA 677

Query: 246 SLTPRALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKP 287
                   G P  +  P LR GG GP      + A G P  P
Sbjct: 678 GAPGE--RGPPGLAGAPGLR-GGAGPPGPEGGKGAAGPPGPP 716



 Score = 32.7 bits (73), Expect = 0.41
 Identities = 32/109 (29%), Positives = 39/109 (35%), Gaps = 20/109 (18%)

Query: 184 RDGSPTDRSW----GSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQN 239
           RDG P         GS GG    G  G  G Q ++G P        R QP V+  P    
Sbjct: 526 RDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFP---- 581

Query: 240 GGLRDSSLTPRALEGNPRASAEPTLRAGGRGPSP-GLPTQEANGQPSKP 287
                    P+  +G P  + E   R G  GP P G P +     P  P
Sbjct: 582 --------GPKGNDGAPGKNGE---RGGPGGPGPQGPPGKNGETGPQGP 619



 Score = 31.6 bits (70), Expect = 0.91
 Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 12/100 (12%)

Query: 194  GSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDSSLTPRALE 253
            G  G   P G  G  G + ++G P    L  ER  P     P     GL  ++  P   +
Sbjct: 960  GPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLP-----GLAGTAGEP-GRD 1013

Query: 254  GNPRASAEPTLRAGGRGPSP-GLPTQEANGQPSKPDTSDH 292
            GNP +   P     GR  SP G   +  NG P  P    H
Sbjct: 1014 GNPGSDGLP-----GRDGSPGGKGDRGENGSPGAPGAPGH 1048



 Score = 29.6 bits (65), Expect = 3.4
 Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 17/98 (17%)

Query: 194 GSGGGQDPGGGQGSGG--GQP----KAGMPAMERLPPER-----PQPQVLASPPVQNGG- 241
           G  GG  P G +G  G  G P     AG P ++ +P ER     P P+     P   G  
Sbjct: 693 GLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGAD 752

Query: 242 ---LRDSSLTPRALEGNPRASAEPTLRAGGRGPSPGLP 276
               +D    P    G P  + +P  +  G G +PGLP
Sbjct: 753 GVPGKDGPRGPTGPIGPPGPAGQPGDK--GEGGAPGLP 788



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 32/117 (27%), Positives = 41/117 (35%), Gaps = 19/117 (16%)

Query: 186 GSPTDRSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDS 245
           G+P       G G+    G+   GG P    P     P   P PQ          G++  
Sbjct: 813 GAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQ----------GVKGE 862

Query: 246 SLTPRALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKPDTSDHQVSLPQGAGS 302
             +P    G P A+  P    G RG  PG P    N  P  P  S  +   P  AG+
Sbjct: 863 RGSP----GGPGAAGFP----GARG-LPGPPGSNGNPGPPGPSGSPGKDGPPGPAGN 910



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 32/101 (31%), Positives = 39/101 (38%), Gaps = 24/101 (23%)

Query: 194 GSGGGQDPG-----GGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDSSLT 248
           GSG    PG     G +GS GG   AG P    LP           PP  NG     +  
Sbjct: 847 GSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLP----------GPPGSNG-----NPG 891

Query: 249 PRALEGNPRASAEPTLRAGGRGP--SPGLPTQEAN-GQPSK 286
           P    G+P     P   AG  G   SPG+   + + GQP +
Sbjct: 892 PPGPSGSPGKDGPPG-PAGNTGAPGSPGVSGPKGDAGQPGE 931


>gi|239748995 PREDICTED: hypothetical protein XP_002346877 [Homo
           sapiens]
          Length = 326

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 18/117 (15%)

Query: 195 SGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDSSLTP----- 249
           S GG   G  + S G +  AG     R P + P     A+   ++  L  S+L P     
Sbjct: 144 SHGGDGRGVARASLGDKAGAGRAGRGR-PAQSPAEADAAARASKSLKLLSSALPPHLRPA 202

Query: 250 ---RALEGNPRASAEPTLRAGGRGPSPGLPTQEANGQPSKPDTSDHQVSLPQGAGSM 303
              RA+ G     + P LR  G GP PG         P +PD +  ++  P  AG++
Sbjct: 203 AKTRAVAGPTAKESPPALRTVGDGPRPG---------PKRPDPAPSRLPPPPHAGAL 250


>gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapiens]
          Length = 1435

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 1/94 (1%)

Query: 209  GGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDSSLTP-RALEGNPRASAEPTLRAG 267
            G   K  +P+ E   PE P P  LA+P V   G +   +T    L  + + SA   LR G
Sbjct: 1305 GKYVKVSIPSSEGASPEPPPPDALAAPYVLYPGFQPVPVTALMPLRCSSQLSAPTFLRQG 1364

Query: 268  GRGPSPGLPTQEANGQPSKPDTSDHQVSLPQGAG 301
             R  +    TQ  +    + D   H    P  AG
Sbjct: 1365 PRASAARARTQSVHESGLQLDPGPHGDCTPHSAG 1398


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 23/163 (14%)

Query: 140  RPPLVRQGRSK-----EGKSRPRTG--------ETTVFSVGRFRVTHIEKRYGLHEHRDG 186
            +PPL  +G  K     +G++ PR          E  V  +G  R+        L E +  
Sbjct: 2117 QPPLENRGLQKSSSFSQGEAEPRGRHRRAGAPLEIPVARLGARRLQESPSLSALSEAQPS 2176

Query: 187  SPTDRSW---GSGGGQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLR 243
            SP   S     +    +P     S   QP A  PA ++ P  RP+P V AS P       
Sbjct: 2177 SPARPSAPKPSTPKSAEPSATTPSDAPQPPAPQPAQDKAPEPRPEP-VRASKPAP----P 2231

Query: 244  DSSLTPRALEGNPRASAEPTLRAGG--RGPSPGLPTQEANGQP 284
              +L   AL   P A    +L+  G  +GPS G     +  +P
Sbjct: 2232 PQALQTLALPLTPYAQIIQSLQLSGHAQGPSQGPAAPPSEPKP 2274


>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin c2 isoform a [Homo sapiens]
          Length = 1214

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 32/105 (30%), Positives = 37/105 (35%), Gaps = 6/105 (5%)

Query: 198  GQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQVLASPPVQNGGLRDSSLTPRALEGNPR 257
            G  PG G     G    G+P     PP  P P +     +  G L DS         N  
Sbjct: 1063 GAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSI-----IPFGSLADSISINLPAPPNLH 1117

Query: 258  ASAEPTLRAGGRGPSPGLPTQEANG-QPSKPDTSDHQVSLPQGAG 301
                    A G  P P LP   AN   P+ P T+    SLP G G
Sbjct: 1118 GHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPG 1162


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.134    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,891,745
Number of Sequences: 37866
Number of extensions: 969730
Number of successful extensions: 8470
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 514
Number of HSP's that attempted gapping in prelim test: 6234
Number of HSP's gapped (non-prelim): 2207
length of query: 303
length of database: 18,247,518
effective HSP length: 102
effective length of query: 201
effective length of database: 14,385,186
effective search space: 2891422386
effective search space used: 2891422386
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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