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Search of human proteins with 194018520
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194018520 G1 to S phase transition 1 isoform 1 [Homo
sapiens]
(637 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 1302 0.0
gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 1296 0.0
gi|46094014 peptide chain release factor 3 [Homo sapiens] 1108 0.0
gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens] 1020 0.0
gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform... 344 1e-94
gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1... 344 1e-94
gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [H... 312 5e-85
gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [H... 307 2e-83
gi|239757543 PREDICTED: similar to eukaryotic translation elonga... 273 5e-73
gi|34147630 Tu translation elongation factor, mitochondrial prec... 117 3e-26
gi|82546879 GTP binding protein 1 [Homo sapiens] 75 2e-13
gi|169162126 PREDICTED: similar to hCG1981735 [Homo sapiens] 73 7e-13
gi|169162824 PREDICTED: similar to hCG1981735 [Homo sapiens] 73 7e-13
gi|239752724 PREDICTED: similar to hCG1981735 [Homo sapiens] 72 2e-12
gi|45593140 GTP binding protein 2 [Homo sapiens] 64 3e-10
gi|169217153 PREDICTED: similar to EEF1A1 protein [Homo sapiens] 58 2e-08
gi|113430525 PREDICTED: similar to EEF1A1 protein [Homo sapiens] 58 2e-08
gi|113429979 PREDICTED: similar to EEF1A1 protein [Homo sapiens] 58 2e-08
gi|68299795 chromodomain helicase DNA binding protein 1 [Homo sa... 58 2e-08
gi|54607086 eukaryotic elongation factor, selenocysteine-tRNA-sp... 57 4e-08
gi|157426893 GUF1 GTPase homolog [Homo sapiens] 54 3e-07
gi|53729339 mitochondrial translational initiation factor 2 prec... 52 1e-06
gi|53729337 mitochondrial translational initiation factor 2 prec... 52 1e-06
gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens] 52 2e-06
gi|4503507 eukaryotic translation initiation factor 2, subunit 3... 51 3e-06
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 49 1e-05
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 47 7e-05
gi|23510368 homeobox D11 [Homo sapiens] 46 1e-04
gi|194363768 homeobox D9 [Homo sapiens] 46 1e-04
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 46 1e-04
>gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens]
Length = 637
Score = 1302 bits (3370), Expect = 0.0
Identities = 637/637 (100%), Positives = 637/637 (100%)
Query: 1 MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN 60
MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN
Sbjct: 1 MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN 60
Query: 61 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV 120
LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV
Sbjct: 61 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV 120
Query: 121 ESSQEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP 180
ESSQEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP
Sbjct: 121 ESSQEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP 180
Query: 181 PEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD 240
PEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD
Sbjct: 181 PEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD 240
Query: 241 KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH 300
KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH
Sbjct: 241 KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH 300
Query: 301 KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM 360
KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM
Sbjct: 301 KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM 360
Query: 361 DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL 420
DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL
Sbjct: 361 DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL 420
Query: 421 PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE 480
PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE
Sbjct: 421 PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE 480
Query: 481 VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH 540
VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH
Sbjct: 481 VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH 540
Query: 541 KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT 600
KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT
Sbjct: 541 KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT 600
Query: 601 ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 637
ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
Sbjct: 601 ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 637
>gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens]
Length = 636
Score = 1296 bits (3354), Expect = 0.0
Identities = 636/637 (99%), Positives = 636/637 (99%), Gaps = 1/637 (0%)
Query: 1 MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN 60
MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN
Sbjct: 1 MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN 60
Query: 61 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV 120
LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV
Sbjct: 61 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV 120
Query: 121 ESSQEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP 180
ESSQEEQSLCEGSNSAVSMELSEPI ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP
Sbjct: 121 ESSQEEQSLCEGSNSAVSMELSEPI-ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP 179
Query: 181 PEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD 240
PEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD
Sbjct: 180 PEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD 239
Query: 241 KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH 300
KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH
Sbjct: 240 KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH 299
Query: 301 KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM 360
KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM
Sbjct: 300 KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM 359
Query: 361 DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL 420
DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL
Sbjct: 360 DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL 419
Query: 421 PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE 480
PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE
Sbjct: 420 PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE 479
Query: 481 VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH 540
VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH
Sbjct: 480 VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH 539
Query: 541 KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT 600
KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT
Sbjct: 540 KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT 599
Query: 601 ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 637
ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
Sbjct: 600 ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 636
>gi|46094014 peptide chain release factor 3 [Homo sapiens]
Length = 628
Score = 1108 bits (2865), Expect = 0.0
Identities = 553/627 (88%), Positives = 575/627 (91%), Gaps = 9/627 (1%)
Query: 19 SGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQRENLSAAFSRQLNVNAKPFVP 78
SGSSSSDSAPDCWDQ DME+PG P G G S +A AEAQRE LS+AFSR+LNVNAKPFVP
Sbjct: 3 SGSSSSDSAPDCWDQVDMESPGSAPSGDGVS-SAVAEAQREPLSSAFSRKLNVNAKPFVP 61
Query: 79 NVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAG-------GRAAPVESSQEEQSLC- 130
NVHAAEFVPSFLRGP PP G+ +N +GAG GR APVE S+EE +
Sbjct: 62 NVHAAEFVPSFLRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEPSREEPLVSL 121
Query: 131 EGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMME 190
EGSNSAV+MELSEP+VENGE EM+ EESWEH +E+SEAEPGGGS GD PPEES EMME
Sbjct: 122 EGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPEESGQEMME 181
Query: 191 EEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYERE 250
E+EEI K KSV+ P GAPKKEHVNVVFIGHVDAGKSTIGGQIM+LTGMVDKRTLEKYERE
Sbjct: 182 EKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYERE 241
Query: 251 AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGG 310
AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETE+KHFTILDAPGHKSFVPNMIGG
Sbjct: 242 AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGG 301
Query: 311 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNE 370
ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWS E
Sbjct: 302 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIE 361
Query: 371 RYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLP 430
RYEECKEKLVPFLKKVGF+PKKDIHFMPCSGLTGAN+KEQSDFCPWY GLPFIPYLDNLP
Sbjct: 362 RYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNLP 421
Query: 431 NFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVE 490
NFNRS+DGPIRLPIVDKYKDMGTVVLGKLESGSI KGQQLVMMPNKHNVEVLGILSDD E
Sbjct: 422 NFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDTE 481
Query: 491 TDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNA 550
TD VAPGENLKIRLKGIEEEEILPGFILCDP+NLCHSGRTFD QIVIIEHKSIICPGYNA
Sbjct: 482 TDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIVIIEHKSIICPGYNA 541
Query: 551 VLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFP 610
VLHIHTCIEEVEITALI LVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFP
Sbjct: 542 VLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFP 601
Query: 611 QMGRFTLRDEGKTIAIGKVLKLVPEKD 637
QMGRFTLRDEGKTIAIGKVLKLVPEKD
Sbjct: 602 QMGRFTLRDEGKTIAIGKVLKLVPEKD 628
>gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens]
Length = 499
Score = 1020 bits (2638), Expect = 0.0
Identities = 499/499 (100%), Positives = 499/499 (100%)
Query: 139 MELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKP 198
MELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKP
Sbjct: 1 MELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKP 60
Query: 199 KSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRET 258
KSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRET
Sbjct: 61 KSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRET 120
Query: 259 WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAV 318
WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAV
Sbjct: 121 WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAV 180
Query: 319 LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEK 378
LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEK
Sbjct: 181 LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEK 240
Query: 379 LVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNFNRSVDG 438
LVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNFNRSVDG
Sbjct: 241 LVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNFNRSVDG 300
Query: 439 PIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGE 498
PIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGE
Sbjct: 301 PIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGE 360
Query: 499 NLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCI 558
NLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCI
Sbjct: 361 NLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCI 420
Query: 559 EEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR 618
EEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR
Sbjct: 421 EEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR 480
Query: 619 DEGKTIAIGKVLKLVPEKD 637
DEGKTIAIGKVLKLVPEKD
Sbjct: 481 DEGKTIAIGKVLKLVPEKD 499
>gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2
[Homo sapiens]
Length = 642
Score = 344 bits (883), Expect = 1e-94
Identities = 196/503 (38%), Positives = 291/503 (57%), Gaps = 22/503 (4%)
Query: 147 ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKP-------- 198
ENG + +P++ ++ I+ ++ + PP + EE+ P P
Sbjct: 143 ENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTI--QASEEQSSTPAPVKKSGKLR 200
Query: 199 KSVVAPPGAPK----KEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEK 254
+ + K K+ +N+V IGHVDAGKST+ G ++YL G ++KRT+ KYE+E+K+
Sbjct: 201 QQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKA 260
Query: 255 NRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQA 314
+ ++ +W LD EER++G T++VG FET K T++DAPGHK F+PNMI GA+QA
Sbjct: 261 GKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQA 320
Query: 315 DLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEE 374
D+AVLV+ A +GEFE GFE GGQTREH +L ++ GV L V +NKMD VNW ER++E
Sbjct: 321 DVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQ--VNWQQERFQE 378
Query: 375 CKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANL---KEQSDFCPWYIGLPFIPYLDNLPN 431
KL FLK+ GF + D+ F+P SGL+G NL + S+ WY GL + +D+
Sbjct: 379 ITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKP 437
Query: 432 FNRSVDGPIRLPIVDKYKDMGT--VVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDV 489
RS+D P RL + D +KD G+ + GK+E+G I G +L+ MP V GI D
Sbjct: 438 PQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDE 497
Query: 490 ETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYN 549
D A G+++ + L G++ +I G I C P + F A+I+I + I G+
Sbjct: 498 PVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFP 557
Query: 550 AVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDF 609
+LH T E I LI +++K +GE +K +P+F+ + Q + L+T I LE +KDF
Sbjct: 558 VLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDF 617
Query: 610 PQMGRFTLRDEGKTIAIGKVLKL 632
++GRF LR G TIA G V ++
Sbjct: 618 KELGRFMLRYGGSTIAAGVVTEI 640
>gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1
[Homo sapiens]
Length = 684
Score = 344 bits (883), Expect = 1e-94
Identities = 196/503 (38%), Positives = 291/503 (57%), Gaps = 22/503 (4%)
Query: 147 ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKP-------- 198
ENG + +P++ ++ I+ ++ + PP + EE+ P P
Sbjct: 185 ENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTI--QASEEQSSTPAPVKKSGKLR 242
Query: 199 KSVVAPPGAPK----KEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEK 254
+ + K K+ +N+V IGHVDAGKST+ G ++YL G ++KRT+ KYE+E+K+
Sbjct: 243 QQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKA 302
Query: 255 NRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQA 314
+ ++ +W LD EER++G T++VG FET K T++DAPGHK F+PNMI GA+QA
Sbjct: 303 GKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQA 362
Query: 315 DLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEE 374
D+AVLV+ A +GEFE GFE GGQTREH +L ++ GV L V +NKMD VNW ER++E
Sbjct: 363 DVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQ--VNWQQERFQE 420
Query: 375 CKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANL---KEQSDFCPWYIGLPFIPYLDNLPN 431
KL FLK+ GF + D+ F+P SGL+G NL + S+ WY GL + +D+
Sbjct: 421 ITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKP 479
Query: 432 FNRSVDGPIRLPIVDKYKDMGT--VVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDV 489
RS+D P RL + D +KD G+ + GK+E+G I G +L+ MP V GI D
Sbjct: 480 PQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDE 539
Query: 490 ETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYN 549
D A G+++ + L G++ +I G I C P + F A+I+I + I G+
Sbjct: 540 PVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFP 599
Query: 550 AVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDF 609
+LH T E I LI +++K +GE +K +P+F+ + Q + L+T I LE +KDF
Sbjct: 600 VLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDF 659
Query: 610 PQMGRFTLRDEGKTIAIGKVLKL 632
++GRF LR G TIA G V ++
Sbjct: 660 KELGRFMLRYGGSTIAAGVVTEI 682
>gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [Homo
sapiens]
Length = 462
Score = 312 bits (800), Expect = 5e-85
Identities = 170/443 (38%), Positives = 256/443 (57%), Gaps = 17/443 (3%)
Query: 209 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 268
+K H+N+V IGHVD+GKST G ++Y G +DKRT+EK+E+EA E + ++ +W LD
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKL 63
Query: 269 QEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEF 328
+ ER++G T+++ FET K + TI+DAPGH+ F+ NMI G SQAD AVL+++A GEF
Sbjct: 64 KAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEF 123
Query: 329 ETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGF 388
E G K GQTREHA+LA T GVK LIV +NKMD +S +RYEE +++ ++KK+G+
Sbjct: 124 EAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGY 183
Query: 389 NPKKDIHFMPCSGLTGANLKEQSDFCPWY------------IGLPFIPYLDNLPNFNRSV 436
NP + F+P SG G N+ E S PW+ G + LD + R
Sbjct: 184 NP-DTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPT 242
Query: 437 DGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTV 494
D P+RLP+ D YK +GTV +G++E+G + G + P EV +
Sbjct: 243 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEA 302
Query: 495 APGENLKIRLKGIEEEEILPGFILCD-PNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLH 553
PG+N+ +K + +++ G + D N+ F AQ++I+ H I GY VL
Sbjct: 303 LPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLD 362
Query: 554 IHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMG 613
HT + L +D++SG+K + P+F+K I + +C+E+F D+P +G
Sbjct: 363 CHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLG 422
Query: 614 RFTLRDEGKTIAIGKVLKLVPEK 636
RF +RD +T+A+G V+K V +K
Sbjct: 423 RFAVRDMRQTVAVG-VIKAVDKK 444
>gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [Homo
sapiens]
Length = 463
Score = 307 bits (786), Expect = 2e-83
Identities = 165/443 (37%), Positives = 256/443 (57%), Gaps = 17/443 (3%)
Query: 209 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 268
+K H+N+V IGHVD+GKST G ++Y G +DKRT+EK+E+EA E + ++ +W LD
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKL 63
Query: 269 QEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEF 328
+ ER++G T+++ FET K + TI+DAPGH+ F+ NMI G SQAD AVL+++A GEF
Sbjct: 64 KAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEF 123
Query: 329 ETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGF 388
E G K GQTREHA+LA T GVK LIV +NKMD +S +RY+E +++ ++KK+G+
Sbjct: 124 EAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGY 183
Query: 389 NPKKDIHFMPCSGLTGANLKEQSDFCPWY------------IGLPFIPYLDNLPNFNRSV 436
NP + F+P SG G N+ E S PW+ G+ + LD + R
Sbjct: 184 NP-ATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTRPT 242
Query: 437 DGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTV 494
D P+RLP+ D YK +GTV +G++E+G + G + P EV +
Sbjct: 243 DKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEA 302
Query: 495 APGENLKIRLKGIEEEEILPGFILCD-PNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLH 553
PG+N+ +K + ++I G + D ++ F +Q++I+ H I GY+ V+
Sbjct: 303 LPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVID 362
Query: 554 IHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMG 613
HT + L +D++SG+K + P+ +K I + +C+E+F +P +G
Sbjct: 363 CHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLG 422
Query: 614 RFTLRDEGKTIAIGKVLKLVPEK 636
RF +RD +T+A+G V+K V +K
Sbjct: 423 RFAVRDMRQTVAVG-VIKNVEKK 444
>gi|239757543 PREDICTED: similar to eukaryotic translation
elongation factor 1 alpha 2 [Homo sapiens]
Length = 444
Score = 273 bits (697), Expect = 5e-73
Identities = 154/444 (34%), Positives = 236/444 (53%), Gaps = 34/444 (7%)
Query: 209 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 268
+K H+N+V IGHVD+GKST G ++Y G +DKRT+EK+E+EA E + ++ +W LD
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKL 63
Query: 269 QEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEF 328
+ ER++G T+++ FET K + TI+DAPGH+ F+ NMI G SQAD AVL+++A GEF
Sbjct: 64 KAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEF 123
Query: 329 ETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGF 388
E G K GQTREHA+LA T GVK LIV +NKMD +S +RY+E +++ ++KK+G+
Sbjct: 124 EAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGY 183
Query: 389 NPKKDIHFMPCSGLTGANLKEQSDFCPWY--------------------IGLPFIPYLDN 428
NP + F+P SG G N+ E S PW+ I P IP
Sbjct: 184 NP-ATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGXRLCPRISCPSIPSGPT 242
Query: 429 LPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDD 488
P+ G +GTV +G++E+G + G + P EV +
Sbjct: 243 FPSHPLPSAG------------IGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHH 290
Query: 489 VETDTVAPGENLKIRLKGIEEEEILPGFILCD-PNNLCHSGRTFDAQIVIIEHKSIICPG 547
PG+N+ +K + ++I G + D ++ F +Q++I+ H I G
Sbjct: 291 EALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAG 350
Query: 548 YNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFK 607
Y+ V+ HT + L +D++SG+K + P+ +K I + +C+E+F
Sbjct: 351 YSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFS 410
Query: 608 DFPQMGRFTLRDEGKTIAIGKVLK 631
+P +G E K+ GKV K
Sbjct: 411 QYPPLGEPGWSGEKKSGGAGKVTK 434
>gi|34147630 Tu translation elongation factor, mitochondrial
precursor [Homo sapiens]
Length = 455
Score = 117 bits (293), Expect = 3e-26
Identities = 97/339 (28%), Positives = 150/339 (44%), Gaps = 44/339 (12%)
Query: 210 KEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQ 269
K HVNV IGHVD GK+T+ I + +KYE +D
Sbjct: 58 KPHVNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEE---------------IDNAP 102
Query: 270 EERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFE 329
EER +G T+ + T +H+ D PGH +V NMI G + D +LV++A G
Sbjct: 103 EERARGITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMP 162
Query: 330 TGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYE-ECKEKLVPFLKKVGF 388
QTREH +LA+ GV+H++V +NK D + E E E +E L F K
Sbjct: 163 -------QTREHLLLARQIGVEHVVVYVNKADAVQDSEMVELVELEIRELLTEFGYKGEE 215
Query: 389 NPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYL-----DNLPNFNRSVDGPIRLP 443
P + G+ L P +GL + L +P R ++ P LP
Sbjct: 216 TPV----------IVGSALCALEGRDP-ELGLKSVQKLLDAVDTYIPVPARDLEKPFLLP 264
Query: 444 IVDKYK--DMGTVVLGKLESGSICKGQQLVMMPNKHNVE--VLGILSDDVETDTVAPGEN 499
+ Y GTVV G LE G + KG + ++ + N+ V GI + G+N
Sbjct: 265 VEAVYSVPGRGTVVTGTLERGILKKGDECELLGHSKNIRTVVTGIEMFHKSLERAEAGDN 324
Query: 500 LKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVII 538
L ++G++ E++ G ++ P ++ + +AQ+ I+
Sbjct: 325 LGALVRGLKREDLRRGLVMVKPGSI-KPHQKVEAQVYIL 362
>gi|82546879 GTP binding protein 1 [Homo sapiens]
Length = 669
Score = 74.7 bits (182), Expect = 2e-13
Identities = 113/471 (23%), Positives = 187/471 (39%), Gaps = 88/471 (18%)
Query: 213 VNVVFIGHVDAGKSTIGGQIMYLTGMVD------KRTLEKYEREAKEKNRETWYLSWALD 266
V V +G+VDAGKST+ G + + G +D ++ L +++ E E R + + L
Sbjct: 161 VRVAVVGNVDAGKSTLLGVLTH--GELDNGRGFARQKLFRHKHEI-ESGRTSSVGNDILG 217
Query: 267 TNQEERDKGKTVEVGRAY-----FETEKKHFTILDAPGHKSFVPNMIGGASQ--ADLAVL 319
+ E K G + E K T +D GH+ ++ + G + D +L
Sbjct: 218 FDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCML 277
Query: 320 VISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKL 379
++ + G G T+EH LA V + V++ K+D N E + + L
Sbjct: 278 MVGSNAGIV-------GMTKEHLGLALALNVP-VFVVVTKIDMCPANILQETLKLLQRLL 329
Query: 380 V-PFLKKV---------------GFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFI 423
P +K+ F+ ++ S +TG NL D ++ L
Sbjct: 330 KSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENL----DLLKMFLNLLS- 384
Query: 424 PYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMP----NKH 477
P + + P I D Y +GTVV G G I L++ P N
Sbjct: 385 ------PRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFL 438
Query: 478 NVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVI 537
++ V I + V G+ LK I+ I G ++ P + F+A+I++
Sbjct: 439 SIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILV 498
Query: 538 IEHKSIICPGYNAVLHIHTCIEEVEITALICLVDK---KSGEKSKTRPRFVKQ------D 588
+ H + I P Y A++H + + TA I +DK ++G+K+ RF+K D
Sbjct: 499 LHHPTTISPRYQAMVHCGS----IRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHID 554
Query: 589 QVCI---ARLRTAGTI--CLETFKDFP-------------QMGRFTLRDEG 621
Q + R + GTI L+T + P + G T RDEG
Sbjct: 555 QRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLTKRDEG 605
>gi|169162126 PREDICTED: similar to hCG1981735 [Homo sapiens]
Length = 155
Score = 73.2 bits (178), Expect = 7e-13
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 311 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNE 370
+ Q D AVL++++ GE E G K Q EH +LA T G+K LIV +NKMD +S+
Sbjct: 44 SGQEDCAVLIVASGVGECEAGISKNKQICEHTLLAYTLGMKQLIVTVNKMDITEPPYSST 103
Query: 371 RYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKE 409
+EE +++ ++KK+ +N + + F+P SG G N+ E
Sbjct: 104 CFEEISKEVKAYIKKISYN-SQTLPFVPISGWHGDNMLE 141
>gi|169162824 PREDICTED: similar to hCG1981735 [Homo sapiens]
Length = 155
Score = 73.2 bits (178), Expect = 7e-13
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 311 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNE 370
+ Q D AVL++++ GE E G K Q EH +LA T G+K LIV +NKMD +S+
Sbjct: 44 SGQEDCAVLIVASGVGECEAGISKNKQICEHTLLAYTLGMKQLIVTVNKMDITEPPYSST 103
Query: 371 RYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKE 409
+EE +++ ++KK+ +N + + F+P SG G N+ E
Sbjct: 104 CFEEISKEVKAYIKKISYN-SQTLPFVPISGWHGDNMLE 141
>gi|239752724 PREDICTED: similar to hCG1981735 [Homo sapiens]
Length = 155
Score = 71.6 bits (174), Expect = 2e-12
Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 311 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNE 370
+ + D AVL++++ GE E G K Q EH +LA T G+K LIV +NKMD +S+
Sbjct: 44 SGREDCAVLIVASGVGECEAGISKNKQICEHTLLAYTLGMKQLIVTVNKMDITEPPYSST 103
Query: 371 RYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKE 409
+EE +++ ++KK+ +N + + F+P SG G N+ E
Sbjct: 104 CFEEISKEVKAYIKKISYN-SQTLPFVPISGWHGDNMLE 141
>gi|45593140 GTP binding protein 2 [Homo sapiens]
Length = 602
Score = 64.3 bits (155), Expect = 3e-10
Identities = 121/565 (21%), Positives = 210/565 (37%), Gaps = 92/565 (16%)
Query: 98 PPAGGAANNHGAGSGAG------------GRAAPVESSQEEQSLCEGSNSAVSMELSEPI 145
P GG GAGS +G R + E N ++L P
Sbjct: 19 PAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKANNPPYLPPEAEDGNIEYKLKLVNPS 78
Query: 146 VENGETEMSPEESWEHKEEISEA------EPGGGSLG----DGRPPEESAHEMMEE---- 191
E + + W +E EA E G +G + R ++ H M E+
Sbjct: 79 QYRFE-HLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEKVGAD 137
Query: 192 -----------EEEIPKPKSVVAPPGAPKKEH---VNVVFIGHVDAGKSTIGGQIMYLTG 237
+ ++P+ + V P + + V +G+VD+GKST+ G + G
Sbjct: 138 ITVLREREVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQ--G 195
Query: 238 MVD----KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVE-----VGRAYFETE 288
+D + L + + ++ T +S+ + KG+ V E+
Sbjct: 196 ELDNGRGRARLNLFRHLHEIQSGRTSSISFEI---LGFNSKGEVVNYSDSRTAEEICESS 252
Query: 289 KKHFTILDAPGHKSFVPNMIGGASQ--ADLAVLVISARKGEFETGFEKGGQTREHAMLAK 346
K T +D GH ++ I G + D A+L++SA G G TREH LA
Sbjct: 253 SKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGI-------AGTTREHLGLAL 305
Query: 347 TAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGAN 406
V IV ++K+D + E +L LK+ G + + +T A
Sbjct: 306 ALKVPFFIV-VSKID----LCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQ 360
Query: 407 LKEQSDFCPWYIGLPFIP---------YLDNLPNFNRSVDGPIRLPIVDKYK-------- 449
QS L + +L+ LP S + + + +++
Sbjct: 361 QFAQSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVP 420
Query: 450 DMGTVVLGKLESGSICKGQQLVMMPNKHN----VEVLGILSDDVETDTVAPGENLKIRLK 505
++GTVV G L SG +G QLV+ P + V I + + G+ + L
Sbjct: 421 EVGTVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALG 480
Query: 506 GIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITA 565
+ + G ++ P F+A+IV++ H + G+ +H+ + + +
Sbjct: 481 DFDRALLRKGMVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGN-VRQTAVVE 539
Query: 566 LICLVDK-KSGEKSKTRPRFVKQDQ 589
I DK ++GEK+ R RF+K +
Sbjct: 540 KIHAKDKLRTGEKAVVRFRFLKHPE 564
>gi|169217153 PREDICTED: similar to EEF1A1 protein [Homo sapiens]
Length = 105
Score = 58.2 bits (139), Expect = 2e-08
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 209 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 268
+K H+++ IGH D+GK T G + VDKRT+E +E++A E + + +W L
Sbjct: 4 EKAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKL 57
Query: 269 QEERDKGKTVEVGRAYFETEKKHFTIL 295
+ E + G T+++ FET K+ +L
Sbjct: 58 KAECECGVTIDISPWKFETSKQWTRLL 84
>gi|113430525 PREDICTED: similar to EEF1A1 protein [Homo sapiens]
Length = 105
Score = 58.2 bits (139), Expect = 2e-08
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 209 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 268
+K H+++ IGH D+GK T G + VDKRT+E +E++A E + + +W L
Sbjct: 4 EKAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKL 57
Query: 269 QEERDKGKTVEVGRAYFETEKKHFTIL 295
+ E + G T+++ FET K+ +L
Sbjct: 58 KAECECGVTIDISPWKFETSKQWTRLL 84
>gi|113429979 PREDICTED: similar to EEF1A1 protein [Homo sapiens]
Length = 105
Score = 58.2 bits (139), Expect = 2e-08
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 209 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 268
+K H+++ IGH D+GK T G + VDKRT+E +E++A E + + +W L
Sbjct: 4 EKAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKL 57
Query: 269 QEERDKGKTVEVGRAYFETEKKHFTIL 295
+ E + G T+++ FET K+ +L
Sbjct: 58 KAECECGVTIDISPWKFETSKQWTRLL 84
>gi|68299795 chromodomain helicase DNA binding protein 1 [Homo
sapiens]
Length = 1710
Score = 58.2 bits (139), Expect = 2e-08
Identities = 95/404 (23%), Positives = 145/404 (35%), Gaps = 82/404 (20%)
Query: 2 DPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQRENL 61
D GS G G G GSSS SSS S G G + +E++ +
Sbjct: 23 DSGSASGSGSGSSSGSSSDGSSSQS-------------GSSDSDSGSESGSQSESESDT- 68
Query: 62 SAAFSRQLNVNAKPFVPNVHAAEF---VPSFL---RGPAAPPPPAGGAANNHGAGSGAGG 115
SR+ V AKP P V AEF PS L R H A S +G
Sbjct: 69 ----SRENKVQAKP--PKVDGAEFWKSSPSILAVQRSAILKKQQQQQQQQQHQASSNSG- 121
Query: 116 RAAPVESSQEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSL 175
S+E+ S E S+ + S + + +E W+ S ++ G
Sbjct: 122 -------SEEDSSSSEDSDDSSS---------EVKRKKHKDEDWQMSGSGSPSQSG---- 161
Query: 176 GDGRPPEESAHEMMEEEEEIPKPKSVV---APPGAPKKEHVNVVFIGHVDAGKSTIGGQI 232
D EE +E E +PK+ V P K ++ GK +G +
Sbjct: 162 SDSESEEEREKSSCDETESDYEPKNKVKSRKPQNRSKSKN-----------GKKILGQKK 210
Query: 233 MYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEV-GRAYFETEKKH 291
+ + E Y+ + + R+ + + + D +EV G + E++
Sbjct: 211 RQIDSSEEDDDEEDYDNDKRSSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDVPQPEEEE 270
Query: 292 FTILDAPGHKSFVPNMIG--GASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAG 349
F ++ F+ IG GA+ A + + A G+ GFEK + E L K G
Sbjct: 271 FETIE-----RFMDCRIGRKGATGATTTIYAVEA-DGDPNAGFEKNKEPGEIQYLIKWKG 324
Query: 350 VKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKD 393
H+ W E E K++ V +KK+ KKD
Sbjct: 325 WSHI----------HNTWETE--ETLKQQNVRGMKKLDNYKKKD 356
>gi|54607086 eukaryotic elongation factor,
selenocysteine-tRNA-specific [Homo sapiens]
Length = 596
Score = 57.4 bits (137), Expect = 4e-08
Identities = 85/362 (23%), Positives = 142/362 (39%), Gaps = 72/362 (19%)
Query: 207 APKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALD 266
A ++ +VNV +GH+D+GK+ + + T + A D
Sbjct: 2 AGRRVNVNVGVLGHIDSGKTALARAL------------------------STTASTAAFD 37
Query: 267 TNQEERDKGKTVEVGRAYF-------------------ETEKK------HFTILDAPGHK 301
+ R++G T+++G + F E E + T++D PGH
Sbjct: 38 KQPQSRERGITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHA 97
Query: 302 SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMD 361
S + +IGGA DL +LVI KG +T Q+ E ++ + A K L+V++NK+D
Sbjct: 98 SLIRTIIGGAQIIDLMMLVIDVTKG-MQT------QSAECLVIGQIACQK-LVVVLNKID 149
Query: 362 DPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL- 420
++ +K+ L+ F I G A E P I L
Sbjct: 150 LLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKPGGPEAPETEAPQGIPELIELL 209
Query: 421 ---PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKH 477
IP D F SVD + K GTV+ G + SGSI G + + K
Sbjct: 210 TSQISIPTRDPSGPFLMSVDHCFSI------KGQGTVMTGTILSGSISLGDSVEIPALKV 263
Query: 478 NVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVI 537
+V + + + G+ L I + + ++L ++C P +L T A ++
Sbjct: 264 VKKVKSMQMFHMPITSAMQGDRLGICVTQF-DPKLLERGLVCAPESL----HTVHAALIS 318
Query: 538 IE 539
+E
Sbjct: 319 VE 320
>gi|157426893 GUF1 GTPase homolog [Homo sapiens]
Length = 669
Score = 54.3 bits (129), Expect = 3e-07
Identities = 58/206 (28%), Positives = 86/206 (41%), Gaps = 33/206 (16%)
Query: 178 GRPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTG 237
G PE A + + E K + P + N + HVD GKST+ +++ LTG
Sbjct: 37 GAAPESWATDRLYSSAEF---KEKLDMSRFPVENIRNFSIVAHVDHGKSTLADRLLELTG 93
Query: 238 MVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRA--YFETEKKHF--T 293
+DK K LD Q ER++G TV+ A ++ E K +
Sbjct: 94 TIDKTKNNKQ----------------VLDKLQVERERGITVKAQTASLFYNCEGKQYLLN 137
Query: 294 ILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHL 353
++D PGH F + S +LV+ A +G QT + LA A + +
Sbjct: 138 LIDTPGHVDFSYEVSRSLSACQGVLLVVDANEG-------IQAQTVANFFLAFEAQLS-V 189
Query: 354 IVLINKMDDPTVNWSNERYEECKEKL 379
I +INK+D N ER E EK+
Sbjct: 190 IPVINKID--LKNADPERVENQIEKV 213
>gi|53729339 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 52.4 bits (124), Expect = 1e-06
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 65/290 (22%)
Query: 191 EEEEIPKPKSVVAPPGA------PKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTL 244
+++++ K K V P A P+ V ++ GHVD GK+T+ L
Sbjct: 155 KQDKVRKNKDAVRRPQADPALLTPRSPVVTIM--GHVDHGKTTL---------------L 197
Query: 245 EKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEK-KHFTILDAPGHKSF 303
+K+ + A++T G T +G + T LD PGH +F
Sbjct: 198 DKFRKTQVA----------AVETG------GITQHIGAFLVSLPSGEKITFLDTPGHAAF 241
Query: 304 VPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDP 363
GA D+ VLV++A G + QT E AK A V +I+ +NK D
Sbjct: 242 SAMRARGAQVTDIVVLVVAADDGVMK-------QTVESIQHAKDAQVP-IILAVNKCDKA 293
Query: 364 TVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFI 423
+ E+ K++L+ + V + D+ +P S LTG NL ++ + L +
Sbjct: 294 EAD-----PEKVKKELLAY-DVVCEDYGGDVQAVPVSALTGDNLMALAEAT---VALAEM 344
Query: 424 PYLDNLPNFNRSVDGPIRLPIVDKYKD--MGTVVLGKLESGSICKGQQLV 471
L PN GP+ +++ + D G V ++ G++ KG LV
Sbjct: 345 LELKADPN------GPVEGTVIESFTDKGRGLVTTAIIQRGTLRKGSVLV 388
>gi|53729337 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 52.4 bits (124), Expect = 1e-06
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 65/290 (22%)
Query: 191 EEEEIPKPKSVVAPPGA------PKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTL 244
+++++ K K V P A P+ V ++ GHVD GK+T+ L
Sbjct: 155 KQDKVRKNKDAVRRPQADPALLTPRSPVVTIM--GHVDHGKTTL---------------L 197
Query: 245 EKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEK-KHFTILDAPGHKSF 303
+K+ + A++T G T +G + T LD PGH +F
Sbjct: 198 DKFRKTQVA----------AVETG------GITQHIGAFLVSLPSGEKITFLDTPGHAAF 241
Query: 304 VPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDP 363
GA D+ VLV++A G + QT E AK A V +I+ +NK D
Sbjct: 242 SAMRARGAQVTDIVVLVVAADDGVMK-------QTVESIQHAKDAQVP-IILAVNKCDKA 293
Query: 364 TVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFI 423
+ E+ K++L+ + V + D+ +P S LTG NL ++ + L +
Sbjct: 294 EAD-----PEKVKKELLAY-DVVCEDYGGDVQAVPVSALTGDNLMALAEAT---VALAEM 344
Query: 424 PYLDNLPNFNRSVDGPIRLPIVDKYKD--MGTVVLGKLESGSICKGQQLV 471
L PN GP+ +++ + D G V ++ G++ KG LV
Sbjct: 345 LELKADPN------GPVEGTVIESFTDKGRGLVTTAIIQRGTLRKGSVLV 388
>gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens]
Length = 751
Score = 51.6 bits (122), Expect = 2e-06
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 208 PKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDT 267
P ++ N+ H+D+GK+T+ +++Y TG + K E K K+ + +D+
Sbjct: 42 PNEKIRNIGISAHIDSGKTTLTERVLYYTGRIAKM------HEVKGKDG----VGAVMDS 91
Query: 268 NQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKG 326
+ ER +G T++ Y + + I+D PGH F + D AVLV+ A G
Sbjct: 92 MELERQRGITIQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGG 150
>gi|4503507 eukaryotic translation initiation factor 2, subunit 3
gamma, 52kDa [Homo sapiens]
Length = 472
Score = 51.2 bits (121), Expect = 3e-06
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 213 VNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEK-------------YEREAKEKNRETW 259
+N+ IGHV GKST+ I + + K LE+ Y+ + R
Sbjct: 42 INIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKLDDPSCPRPEC 101
Query: 260 YLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVL 319
Y S T D+ T G +H + +D PGH + M+ GA+ D A+L
Sbjct: 102 YRSCGSSTP----DEFPTDIPGTKGNFKLVRHVSFVDCPGHDILMATMLNGAAVMDAALL 157
Query: 320 VISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEE 374
+I+ + + QT EH + +KH+++L NK+D + + E+YE+
Sbjct: 158 LIAGNESCPQP------QTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQ 206
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 48.9 bits (115), Expect = 1e-05
Identities = 38/117 (32%), Positives = 49/117 (41%), Gaps = 13/117 (11%)
Query: 5 SGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQRENLSAA 64
SGGGGGG GGGGSSS S+SS G G G S ++ ++ +
Sbjct: 396 SGGGGGGSGGGGSSSSSNSSAGG------------GAGKQNGATSYSSVVADSPAEVALS 443
Query: 65 FSRQLNVNAKPFVPNVHAAEFVPSFLRGP-AAPPPPAGGAANNHGAGSGAGGRAAPV 120
S N +++ P PS + P AA P AGG A G SG P+
Sbjct: 444 SSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGAGGVAPGSGNNSGGPSLLVPL 500
Score = 30.4 bits (67), Expect = 5.2
Identities = 38/155 (24%), Positives = 52/155 (33%), Gaps = 38/155 (24%)
Query: 78 PNVHAAEFVPSFLRGPAA--PPPPAGGAANNHGAGSGAGGRAAPVESS------------ 123
P +A P GP+ P PP+ + G GSG GG ++ SS
Sbjct: 368 PAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAGGGAGKQNGAT 427
Query: 124 ----------QEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGG 173
E G N+A S L P +G P S KE + A G G
Sbjct: 428 SYSSVVADSPAEVALSSSGGNNASSQALGPP---SGPHNPPPSTS---KEPSAAAPTGAG 481
Query: 174 SLGDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAP 208
+ G ++ +P P V PP +P
Sbjct: 482 GVAPGSGNNSGGPSLL-----VPLP---VNPPSSP 508
Score = 30.0 bits (66), Expect = 6.8
Identities = 34/163 (20%), Positives = 52/163 (31%), Gaps = 17/163 (10%)
Query: 22 SSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQRENLSAAFSRQLNVNAKPFVPNVH 81
+ S S P + P P C S + + + S N +KP N H
Sbjct: 255 NQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSPAKN-GSKPVHSNQH 313
Query: 82 AAEFVPSFLRGPAAPP------PPAGGAANNHGAGSGAGGRAAPVESSQEEQSLCEGSNS 135
+ PA PP PPA A + +G AAP + + S NS
Sbjct: 314 P--------QSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSALGPKASPAPSHNS 365
Query: 136 AVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDG 178
++ + + P + + + GGG G G
Sbjct: 366 GTPAPYAQAVAPPAPS--GPSTTQPRPPSVQPSGGGGGGSGGG 406
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 46.6 bits (109), Expect = 7e-05
Identities = 26/54 (48%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 2 DPGSGGGGGGGGGGGSSS------GSSSSDSAPDCWDQADMEAPGPGPCGGGGS 49
+PG GGGGGGGG GGS+S G +S A A GPG GGGGS
Sbjct: 24 EPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGGGPGGSGGGGS 77
Score = 33.5 bits (75), Expect = 0.61
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 5 SGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPG---PGPCGGGGSLAA 52
SGGG GGG GGS +SS + P PG GP G GG A+
Sbjct: 2 SGGGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKAS 52
Score = 30.8 bits (68), Expect = 4.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 5 SGGGGGGGGGGGSSSGSSSSDSAP 28
S GGG GG GGG S G + S P
Sbjct: 64 SSGGGPGGSGGGGSGGPGAGTSFP 87
>gi|23510368 homeobox D11 [Homo sapiens]
Length = 338
Score = 45.8 bits (107), Expect = 1e-04
Identities = 57/210 (27%), Positives = 67/210 (31%), Gaps = 71/210 (33%)
Query: 3 PGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGG------SLAAAAEA 56
P GGGGGG GGGSS G PG G G GG + AAAA A
Sbjct: 74 PYRGGGGGGSAGGGSSGGG-----------------PGGGGGGAGGYAPYYAAAAAAAAA 116
Query: 57 QRENLSAAFSRQLNVNA-------------------KPFVPNVHAAEFVPSFLR------ 91
AA R+L A P P A+ F + R
Sbjct: 117 AAAAEEAAMQRELLPPAGRRPDVLFKAPEPVCAAPGPPHGPAGAASNFYSAVGRNGILPQ 176
Query: 92 ---------------GPAAPPPPAG----GAANNH----GAGSGAGGRAAPVESSQEEQS 128
GP PPPPA GAA+ GAG G G E +
Sbjct: 177 GFDQFYEAAPGPPFAGPQPPPPPAPPQPEGAADKGDPRTGAGGGGGSPCTKATPGSEPKG 236
Query: 129 LCEGSNSAVSMELSEPIVENGETEMSPEES 158
EGS E E + ++P+ S
Sbjct: 237 AAEGSGGDGEGPPGEAGAEKSSSAVAPQRS 266
>gi|194363768 homeobox D9 [Homo sapiens]
Length = 352
Score = 45.8 bits (107), Expect = 1e-04
Identities = 46/167 (27%), Positives = 63/167 (37%), Gaps = 20/167 (11%)
Query: 3 PGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADME-----APGPGPCG---GGGSLAAAA 54
PG GGGGGGGGGG G S S P ++ AP P S + ++
Sbjct: 127 PGGAGGGGGGGGGGPGRGPSPGPSGPANGRHYGIKPETRAAPAPATAASTTSSSSTSLSS 186
Query: 55 EAQRENLSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAG 114
++R S A Q + F N SFL+ AA G GA +G G
Sbjct: 187 SSKRTECSVARESQ-GSSGPEFSCN--------SFLQEKAAAATGGTGPGAGIGAATGTG 237
Query: 115 GRAAPVESSQEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEH 161
G + P S C S + S+P + + +P +W H
Sbjct: 238 GSSEPSACSDHPIPGC--SLKEEEKQHSQPQQQQLDPN-NPAANWIH 281
Score = 30.0 bits (66), Expect = 6.8
Identities = 57/221 (25%), Positives = 77/221 (34%), Gaps = 43/221 (19%)
Query: 8 GGGGGGGGGSSSGSSSS---DSA----PDCWDQADMEAPGPGPCGGGGSLA-AAAEAQRE 59
GG G SSSG+ S+ DS D A PGPG G +A A E
Sbjct: 3 GGSAGRLKMSSSGTLSNYYVDSLIGHEGDEVFAARFGPPGPGAQGRPAGVADGPAATAAE 62
Query: 60 NLSAAFSRQLNVNAKPF--VPNVHAAEFVPSFLRGPAAPPPP------------------ 99
S +F+ + V + + VP+ A S L P PPPP
Sbjct: 63 FASCSFAPRSAVFSASWSAVPSQPPAAAAMSGLYHPYVPPPPLAASASEPGRYVRSWMEP 122
Query: 100 ----AGGAANNHGAGSGAGGRAAPVESSQEEQSLCEG----SNSAVSMELSEPIVENGET 151
GGA G G G GR S G + +A + + + T
Sbjct: 123 LPGFPGGAGGGGGGGGGGPGRGPSPGPSGPANGRHYGIKPETRAAPAPATAASTTSSSST 182
Query: 152 EMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEE 192
+S S + E S A GS G PE S + ++E+
Sbjct: 183 SLS---SSSKRTECSVARESQGSSG----PEFSCNSFLQEK 216
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 45.8 bits (107), Expect = 1e-04
Identities = 69/263 (26%), Positives = 104/263 (39%), Gaps = 54/263 (20%)
Query: 119 PVESSQEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDG 178
P E +EE+ E S E E GE+E S E E E++S+ + G +L D
Sbjct: 531 PEEEEEEEEEEEEDEESEEEEE------EEGESEGS--EGDEEDEKVSDEKDSGKTL-DK 581
Query: 179 RPPEE--------SAHEMMEEEEEIPKPKSVVAPPGAPKKEHVN--------VVFIGHVD 222
+P +E S + +EE K K + ++VN + +GHVD
Sbjct: 582 KPSKEMSSDSEYDSDDDRTKEERAYDKAKRRIEKRRLEHSKNVNTEKLRAPIICVLGHVD 641
Query: 223 AGKSTIGGQIMYLTGMVDK-RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVG 281
GK+ I +DK R + EA ++ + L+ E+ K
Sbjct: 642 TGKTKI----------LDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKN---- 687
Query: 282 RAYFETEKKHFT---ILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQT 338
F+ E I+D PGH+SF G+S D+A+LV+ G QT
Sbjct: 688 ---FDRENVRIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHG-------LEPQT 737
Query: 339 REHAMLAKTAGVKHLIVLINKMD 361
E L K+ IV +NK+D
Sbjct: 738 IESINLLKSKKCP-FIVALNKID 759
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,389,210
Number of Sequences: 37866
Number of extensions: 1635889
Number of successful extensions: 20822
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 453
Number of HSP's that attempted gapping in prelim test: 11855
Number of HSP's gapped (non-prelim): 5049
length of query: 637
length of database: 18,247,518
effective HSP length: 109
effective length of query: 528
effective length of database: 14,120,124
effective search space: 7455425472
effective search space used: 7455425472
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.