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Search of human proteins with 190886446
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|190886446 hypothetical protein LOC317662 [Homo sapiens]
(582 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|190886446 hypothetical protein LOC317662 [Homo sapiens] 1173 0.0
gi|54792133 hypothetical protein LOC25854 [Homo sapiens] 120 4e-27
gi|54792131 hypothetical protein LOC25854 [Homo sapiens] 120 4e-27
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 38 0.029
gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens] 37 0.050
gi|223633944 hypothetical protein LOC389762 [Homo sapiens] 35 0.15
gi|223671858 hypothetical protein LOC389761 [Homo sapiens] 35 0.15
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 35 0.15
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 35 0.19
gi|150417978 platelet glycoprotein Ib alpha polypeptide precurso... 35 0.25
gi|161016767 mucin 21 [Homo sapiens] 35 0.25
gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens] 34 0.32
gi|19923343 Cbp/p300-interacting transactivator, with Glu/Asp-ri... 33 0.55
gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo ... 33 0.55
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 33 0.72
gi|91982772 mucin 17 [Homo sapiens] 33 0.72
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 33 0.94
gi|42544233 leucine rich repeat neuronal 2 [Homo sapiens] 33 0.94
gi|68299795 chromodomain helicase DNA binding protein 1 [Homo sa... 33 0.94
gi|42544231 leucine rich repeat neuronal 2 [Homo sapiens] 33 0.94
gi|52630419 sterol regulatory element binding transcription fact... 32 1.2
gi|22547195 sterol regulatory element binding transcription fact... 32 1.2
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 32 1.2
gi|151301154 mucin 6, gastric [Homo sapiens] 32 1.2
gi|167621456 kinase suppressor of ras 2 [Homo sapiens] 32 1.6
gi|21327710 nucleosome assembly protein 1-like 3 [Homo sapiens] 32 2.1
gi|25121978 deleted in azoospermia-like [Homo sapiens] 32 2.1
gi|28373194 adhesion regulating molecule 1 precursor [Homo sapiens] 32 2.1
gi|28373192 adhesion regulating molecule 1 precursor [Homo sapiens] 32 2.1
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 32 2.1
>gi|190886446 hypothetical protein LOC317662 [Homo sapiens]
Length = 582
Score = 1173 bits (3035), Expect = 0.0
Identities = 582/582 (100%), Positives = 582/582 (100%)
Query: 1 MISRYTRKAVPQSLELKGITKHALNHHPPPEKLEEISPTSDSHEKDTSSQSKSDITRESS 60
MISRYTRKAVPQSLELKGITKHALNHHPPPEKLEEISPTSDSHEKDTSSQSKSDITRESS
Sbjct: 1 MISRYTRKAVPQSLELKGITKHALNHHPPPEKLEEISPTSDSHEKDTSSQSKSDITRESS 60
Query: 61 FTSADTGNSLSAFPSYTGAGISTEGSSDFSWGYGELDQNATEKVQTMFTAIDELLYEQKL 120
FTSADTGNSLSAFPSYTGAGISTEGSSDFSWGYGELDQNATEKVQTMFTAIDELLYEQKL
Sbjct: 61 FTSADTGNSLSAFPSYTGAGISTEGSSDFSWGYGELDQNATEKVQTMFTAIDELLYEQKL 120
Query: 121 SVHTKSLQEECQQWTASFPHLRILGRQIITPSEGYRLYPRSPSAVSASYETTLSQERDST 180
SVHTKSLQEECQQWTASFPHLRILGRQIITPSEGYRLYPRSPSAVSASYETTLSQERDST
Sbjct: 121 SVHTKSLQEECQQWTASFPHLRILGRQIITPSEGYRLYPRSPSAVSASYETTLSQERDST 180
Query: 181 IFGIRGKKLHFSSSYAHKASSIAKSSSFCSMERDEEDSIIVSEGIIEEYLAFDHIDIEEG 240
IFGIRGKKLHFSSSYAHKASSIAKSSSFCSMERDEEDSIIVSEGIIEEYLAFDHIDIEEG
Sbjct: 181 IFGIRGKKLHFSSSYAHKASSIAKSSSFCSMERDEEDSIIVSEGIIEEYLAFDHIDIEEG 240
Query: 241 FHGKKSEAATEKQKLGYPPIAPFYCMKEDVLAYVFDSVWCKVVSCMEQLTRSHWEGFASD 300
FHGKKSEAATEKQKLGYPPIAPFYCMKEDVLAYVFDSVWCKVVSCMEQLTRSHWEGFASD
Sbjct: 241 FHGKKSEAATEKQKLGYPPIAPFYCMKEDVLAYVFDSVWCKVVSCMEQLTRSHWEGFASD 300
Query: 301 DESNVAVTRPDSESSCVLSELHPLVLPRVPQSKVLYITSNPMSLCQASRHQPNVNDLLVH 360
DESNVAVTRPDSESSCVLSELHPLVLPRVPQSKVLYITSNPMSLCQASRHQPNVNDLLVH
Sbjct: 301 DESNVAVTRPDSESSCVLSELHPLVLPRVPQSKVLYITSNPMSLCQASRHQPNVNDLLVH 360
Query: 361 GMPLQPRNLSLMDKLLDLDDKLLMRPGSSTILSTRNWPNRAVEFSTSSLSYTVQSTRRRN 420
GMPLQPRNLSLMDKLLDLDDKLLMRPGSSTILSTRNWPNRAVEFSTSSLSYTVQSTRRRN
Sbjct: 361 GMPLQPRNLSLMDKLLDLDDKLLMRPGSSTILSTRNWPNRAVEFSTSSLSYTVQSTRRRN 420
Query: 421 PPPRTLHPISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTPLSRNNLLPPIGTAEV 480
PPPRTLHPISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTPLSRNNLLPPIGTAEV
Sbjct: 421 PPPRTLHPISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTPLSRNNLLPPIGTAEV 480
Query: 481 EHVSTVGPQRQMKPHGDSSRAQSAVVDEPNYQQPQERLLLPDFFPRPNTTQSFLLDTQYR 540
EHVSTVGPQRQMKPHGDSSRAQSAVVDEPNYQQPQERLLLPDFFPRPNTTQSFLLDTQYR
Sbjct: 481 EHVSTVGPQRQMKPHGDSSRAQSAVVDEPNYQQPQERLLLPDFFPRPNTTQSFLLDTQYR 540
Query: 541 RSCAVEYPHQARPGRGSAGPQLHGSTKSQSGGRPVSRTRQGP 582
RSCAVEYPHQARPGRGSAGPQLHGSTKSQSGGRPVSRTRQGP
Sbjct: 541 RSCAVEYPHQARPGRGSAGPQLHGSTKSQSGGRPVSRTRQGP 582
>gi|54792133 hypothetical protein LOC25854 [Homo sapiens]
Length = 482
Score = 120 bits (300), Expect = 4e-27
Identities = 125/477 (26%), Positives = 209/477 (43%), Gaps = 54/477 (11%)
Query: 114 LLYEQKLSVHTKSLQEECQQWTASFPHLRILGRQIITPSEGYRLYPRSPSAVSASYETTL 173
+L+E K++ T+SL EC +WT HLR+LGRQ+I P++ + + + SA + L
Sbjct: 1 MLFEGKVNPQTQSLLAECGEWTRRSLHLRVLGRQLILPTDKGVQHFQGSTPASAVHRPPL 60
Query: 174 S------QERDSTIFG--IRGKKLHFSSSYAHKASSIAKSSSFCSMERDEEDSIIVSEGI 225
S R+ I G I L S+ + +A ++ S+E + + +G
Sbjct: 61 SACGHSSNIRELCISGSQIVPAALSASALPGPDDTGVADLTARSSLEEE----VYHVDGK 116
Query: 226 IEEYLAFDHI-DIEEGFHGKKSEAATEKQKLGYPPIAPFYCMKEDVLAYVFDSVWCKVVS 284
IEEY AFD D +E K ++ + +KLG PP++P C+K+ V A VFD VW +V
Sbjct: 117 IEEYFAFDRKEDDDECLEQKPAQPGRKWRKLGLPPVSPRDCVKDAVAAEVFDHVWTNMVE 176
Query: 285 CMEQLTRSHWEGFASDDESNVAVTRPDSESSCVLSELHPLVLPRVPQSKVLYITSNPM-- 342
+E+L R HW E+ + + E+ V P VL VP + + P
Sbjct: 177 LLEELIRKHW-------ETTLTEGKKQRETLKVAGNRFPHVL--VPHAHADGASGPPSGH 227
Query: 343 ----SLCQASRHQP------------NVNDLL-VHGMPLQPRNLSLMDKLLDLDDKLLMR 385
+ ASR P ++N ++ + PLQ R D+ + +
Sbjct: 228 AEAHGISLASRLNPPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASG 287
Query: 386 PGSSTILSTRNWPNRAVEFSTSSLSYTVQSTRRRNPPPRTLHPISTSHSCAETPRSV-EE 444
G+ + S P+R +S ++ + + ++ P P L +++ +TP +E
Sbjct: 288 GGAGALSSA---PHR---LGRASDTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDE 341
Query: 445 ILRGARVPVAPDSLSSP-SPTPLSRNNLLPPIGTAEVEHVSTVGPQRQMKPHGD--SSRA 501
+LRG ++P D ++SP T SR PP+ T + V R + G +R
Sbjct: 342 VLRGTKLPTGVDHMASPLVQTSRSR---FPPLVTETRGQNTAVPGCRLVSYRGRHLQNRV 398
Query: 502 QSAVVDEPNYQQPQERLLLPDFFPRPNTTQSFLLDTQYRRSCAVEYPHQARPGRGSA 558
SA+ D + +ER + RP+TT +F R+S + A G +
Sbjct: 399 LSAMPDGTERSRLRERTATLERLSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTGQS 455
>gi|54792131 hypothetical protein LOC25854 [Homo sapiens]
Length = 482
Score = 120 bits (300), Expect = 4e-27
Identities = 125/477 (26%), Positives = 209/477 (43%), Gaps = 54/477 (11%)
Query: 114 LLYEQKLSVHTKSLQEECQQWTASFPHLRILGRQIITPSEGYRLYPRSPSAVSASYETTL 173
+L+E K++ T+SL EC +WT HLR+LGRQ+I P++ + + + SA + L
Sbjct: 1 MLFEGKVNPQTQSLLAECGEWTRRSLHLRVLGRQLILPTDKGVQHFQGSTPASAVHRPPL 60
Query: 174 S------QERDSTIFG--IRGKKLHFSSSYAHKASSIAKSSSFCSMERDEEDSIIVSEGI 225
S R+ I G I L S+ + +A ++ S+E + + +G
Sbjct: 61 SACGHSSNIRELCISGSQIVPAALSASALPGPDDTGVADLTARSSLEEE----VYHVDGK 116
Query: 226 IEEYLAFDHI-DIEEGFHGKKSEAATEKQKLGYPPIAPFYCMKEDVLAYVFDSVWCKVVS 284
IEEY AFD D +E K ++ + +KLG PP++P C+K+ V A VFD VW +V
Sbjct: 117 IEEYFAFDRKEDDDECLEQKPAQPGRKWRKLGLPPVSPRDCVKDAVAAEVFDHVWTNMVE 176
Query: 285 CMEQLTRSHWEGFASDDESNVAVTRPDSESSCVLSELHPLVLPRVPQSKVLYITSNPM-- 342
+E+L R HW E+ + + E+ V P VL VP + + P
Sbjct: 177 LLEELIRKHW-------ETTLTEGKKQRETLKVAGNRFPHVL--VPHAHADGASGPPSGH 227
Query: 343 ----SLCQASRHQP------------NVNDLL-VHGMPLQPRNLSLMDKLLDLDDKLLMR 385
+ ASR P ++N ++ + PLQ R D+ + +
Sbjct: 228 AEAHGISLASRLNPPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASG 287
Query: 386 PGSSTILSTRNWPNRAVEFSTSSLSYTVQSTRRRNPPPRTLHPISTSHSCAETPRSV-EE 444
G+ + S P+R +S ++ + + ++ P P L +++ +TP +E
Sbjct: 288 GGAGALSSA---PHR---LGRASDTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDE 341
Query: 445 ILRGARVPVAPDSLSSP-SPTPLSRNNLLPPIGTAEVEHVSTVGPQRQMKPHGD--SSRA 501
+LRG ++P D ++SP T SR PP+ T + V R + G +R
Sbjct: 342 VLRGTKLPTGVDHMASPLVQTSRSR---FPPLVTETRGQNTAVPGCRLVSYRGRHLQNRV 398
Query: 502 QSAVVDEPNYQQPQERLLLPDFFPRPNTTQSFLLDTQYRRSCAVEYPHQARPGRGSA 558
SA+ D + +ER + RP+TT +F R+S + A G +
Sbjct: 399 LSAMPDGTERSRLRERTATLERLSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTGQS 455
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 37.7 bits (86), Expect = 0.029
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 16/131 (12%)
Query: 386 PGSSTILSTRNWPNRAVEFSTSSLSYTVQSTRRRNPPPRTLHPISTSHSCAETPRSVEEI 445
P S TIL++ + P L+ + ST P P P + + P S
Sbjct: 1850 PASVTILASASIP---------ILASALASTSAPTPAPAASSPAAPVITAPTIPASAPT- 1899
Query: 446 LRGARVPVAPDSLS--SPSPTPLSRNNLLPPIGTAEVEHVSTVGPQRQMKPHGDSSRAQS 503
A VP+AP S S +P+PTP+S N PP A+ + + Q ++ SS+
Sbjct: 1900 ---ASVPLAPASASAPAPAPTPVSAPNPAPP-APAQTQAQTHKPVQNPLQTTSQSSKQPP 1955
Query: 504 AVVDEPNYQQP 514
+ P+ Q P
Sbjct: 1956 PSIRLPSAQTP 1966
>gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens]
Length = 170
Score = 37.0 bits (84), Expect = 0.050
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 34 EEISPTSDSHEKDTSSQSKSDITRESSFTSADTGNSLSAFPSYTGAGISTEGSSD 88
EE S +S S + DT S S + SS TS+ + +S S S + + ST+ SSD
Sbjct: 106 EETSTSSSSEDSDTDESSSSSSSSASSTTSSSSSDSDSDSSSSSSSSTSTDSSSD 160
>gi|223633944 hypothetical protein LOC389762 [Homo sapiens]
Length = 917
Score = 35.4 bits (80), Expect = 0.15
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 16/109 (14%)
Query: 20 TKHALNHHPPPEKLEEISPTSDSHEKDTSSQSKSDITRESSFTS----ADTGNSLSAFPS 75
T HH PP +P++ E T +QSKS++T +F +G S ++ P+
Sbjct: 286 TDSCARHHGPP------TPSALPPEDCTVTQSKSNLTVLKTFPEMLSLGGSGGSSTSAPT 339
Query: 76 YTGAGISTEGSSDFSWGYGELDQNATEKVQTMFTAIDELLYEQKLSVHT 124
G S SS+FSW +A + + F D E+ L++H+
Sbjct: 340 TKGIDHSCPASSEFSW----WQPHAKDSFSSNFVPSD--FMEELLTLHS 382
>gi|223671858 hypothetical protein LOC389761 [Homo sapiens]
Length = 917
Score = 35.4 bits (80), Expect = 0.15
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 16/109 (14%)
Query: 20 TKHALNHHPPPEKLEEISPTSDSHEKDTSSQSKSDITRESSFTS----ADTGNSLSAFPS 75
T HH PP +P++ E T +QSKS++T +F +G S ++ P+
Sbjct: 286 TDSCARHHGPP------TPSALPPEDCTVTQSKSNLTVLKTFPEMLSLGGSGGSSTSAPT 339
Query: 76 YTGAGISTEGSSDFSWGYGELDQNATEKVQTMFTAIDELLYEQKLSVHT 124
G S SS+FSW +A + + F D E+ L++H+
Sbjct: 340 TKGIDHSCPASSEFSW----WQPHAKDSFSSNFVPSD--FMEELLTLHS 382
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 35.4 bits (80), Expect = 0.15
Identities = 23/103 (22%), Positives = 41/103 (39%)
Query: 415 STRRRNPPPRTLHPISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTPLSRNNLLPP 474
ST ++ PP + +H + + +G+R P SP P R N P
Sbjct: 795 STPQQAPPGQPQQGTFVAHKEIKLTLLNKAADKGSRKRYEPSDKDRQSPPPAKRPNTSPD 854
Query: 475 IGTAEVEHVSTVGPQRQMKPHGDSSRAQSAVVDEPNYQQPQER 517
G+ + + +G + + G +S+A +A D PQ +
Sbjct: 855 RGSRDRKSGGRLGSPKPERQRGQNSKAPAAPADRKRQLSPQSK 897
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 35.0 bits (79), Expect = 0.19
Identities = 45/167 (26%), Positives = 59/167 (35%), Gaps = 26/167 (15%)
Query: 417 RRRNPPPRTLHP-ISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTPLSRNNLLPPI 475
RRR+P PR P I +S + P+ R A P P +SPSP P R + PP
Sbjct: 587 RRRSPSPRRYSPPIQRRYSPSPPPKR-----RTASPPPPPKRRASPSPPPKRRVSHSPPP 641
Query: 476 GTAEVEHVSTVGPQRQMKPHGDSSRAQSAVVDEPNYQQPQERLLLPDFFPRPNTTQSFLL 535
P K SS ++S E QP +R PRP Q+
Sbjct: 642 KQRSSPVTKRRSPSLSSKHRKGSSPSRS--TREARSPQPNKR---HSPSPRPRAPQTSSS 696
Query: 536 DTQYRRSCAVEYPHQARPGRGSAGPQLHGSTKSQSGGRPVSRTRQGP 582
RR S+ PQ S + RP+ R + P
Sbjct: 697 PPPVRRG-------------ASSSPQRRQSPSPST--RPIRRVSRTP 728
>gi|150417978 platelet glycoprotein Ib alpha polypeptide precursor
[Homo sapiens]
Length = 639
Score = 34.7 bits (78), Expect = 0.25
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 390 TILSTRNWPNRAVEFSTSSLSYTVQSTRRRNPPPRTLHPI------STSHSCAETPRSVE 443
T R PN + + + S T +ST P P T P+ T+ +P + E
Sbjct: 353 TTFPPRWTPNFTLHMESITFSKTPKSTTEPTPSPTTSEPVPEPAPNMTTLEPTPSPTTPE 412
Query: 444 EILRGARVPVAPDSLSSPSPTPLS-RNNLLPPIGTAEVEHVS 484
A P P+ S P+P+P + +P I T+ VS
Sbjct: 413 PTSEPAPSPTTPEPTSEPAPSPTTPEPTPIPTIATSPTILVS 454
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 34.7 bits (78), Expect = 0.25
Identities = 38/172 (22%), Positives = 64/172 (37%), Gaps = 1/172 (0%)
Query: 36 ISPTSDSHEKDTSSQSKSDITRESSFTSADTGNSLSAFPSYTGAGISTEGSSDFSWGYGE 95
IS ++S TSS + + ESS S+ + ++ S T +G ST +SD S E
Sbjct: 102 ISIATNSESSTTSSGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSSE 161
Query: 96 LDQNATEKVQTMFTAIDELLYEQKLSVHTK-SLQEECQQWTASFPHLRILGRQIITPSEG 154
+ T + + +V ++ S + T S + T S G
Sbjct: 162 ASTATNSESSTTSSGASTATNSESSTVSSRASTATNSESSTTSSGASTATNSESRTTSNG 221
Query: 155 YRLYPRSPSAVSASYETTLSQERDSTIFGIRGKKLHFSSSYAHKASSIAKSS 206
S S+ ++S +T + ST G + SS + A +S
Sbjct: 222 AGTATNSESSTTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNS 273
Score = 30.4 bits (67), Expect = 4.7
Identities = 35/183 (19%), Positives = 68/183 (37%), Gaps = 23/183 (12%)
Query: 33 LEEISPTSDSHEKDTSSQSKSDITRESSFTSADTGNSLSAF---------PSYTGAGIST 83
L + ++S+E TS+ + S + + T+ ++G+S+++ S T G+S
Sbjct: 15 LLHLEAATNSNETSTSANTGSSVISSGASTATNSGSSVTSSGVSTATISGSSVTSNGVSI 74
Query: 84 EGSSDFSWGYGELDQNATEKVQTMFTAIDELLYEQKLSVHTKSLQEECQQWTASFPHLRI 143
+S+F + + T+ + I S+ + T S
Sbjct: 75 VTNSEFHTTSSGISTATNSEFSTVSSGI--------------SIATNSESSTTSSGASTA 120
Query: 144 LGRQIITPSEGYRLYPRSPSAVSASYETTLSQERDSTIFGIRGKKLHFSSSYAHKASSIA 203
+ TPS G S S+ ++S +T + ST + SS +S A
Sbjct: 121 TNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNSESSTTSSGASTA 180
Query: 204 KSS 206
+S
Sbjct: 181 TNS 183
Score = 29.6 bits (65), Expect = 8.0
Identities = 38/171 (22%), Positives = 62/171 (36%), Gaps = 1/171 (0%)
Query: 37 SPTSDSHEKDTSSQSKSDITRESSFTSADTGNSLSAFPSYTGAGISTEGSSDFSW-GYGE 95
S ++S SS + + ESS TS+ G + ++ S +GIST +S+ S G
Sbjct: 238 STATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGA 297
Query: 96 LDQNATEKVQTMFTAIDELLYEQKLSVHTKSLQEECQQWTASFPHLRILGRQIITPSEGY 155
+E T A + + S + T S + T S G
Sbjct: 298 NTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGA 357
Query: 156 RLYPRSPSAVSASYETTLSQERDSTIFGIRGKKLHFSSSYAHKASSIAKSS 206
S S+ ++S +T + ST+ SS +S A +S
Sbjct: 358 STATNSGSSTTSSGTSTATNSESSTVSSGASTATTSESSTTSSGASTATNS 408
>gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens]
Length = 3661
Score = 34.3 bits (77), Expect = 0.32
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 123 HTKSLQ--EECQQWTASFPHLRILGRQII---TPSEGYRLYPRSPSAVSASYETTLSQER 177
H S+Q E + W A GR+++ + EG RL PR S V T+++E
Sbjct: 1606 HLSSVQAPEVAKSWAALASWAYRWGRKVVDNASQGEGVRLLPREKSEVQNLLPDTITEEE 1665
Query: 178 DSTIFGIRGKKLHFSSSYAHKASSIAKSSSFCSMERDEEDSII 220
I+GI G+ + + + ++ + S E +EED ++
Sbjct: 1666 KERIYGILGQAVCRPAGIQDEDITLQITES----EDNEEDDMV 1704
>gi|19923343 Cbp/p300-interacting transactivator, with Glu/Asp-rich
carboxy-terminal domain, 2 [Homo sapiens]
Length = 270
Score = 33.5 bits (75), Expect = 0.55
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 9 AVPQSLELKGITKHALNHHPPPEK--LEEISPTSDSHEKDTSSQSKSDITRESSFTSADT 66
++P S++L+ + NHHP P + ++ P + H+ + ++Q D + S S+
Sbjct: 109 SLPASMQLQKLNNQYFNHHPYPHNHYMPDLHPAA-GHQMNGTNQHFRDCNPKHSGGSSTP 167
Query: 67 GNSLSAFPSYTGAGISTEGSSDFSWGYGELDQNA 100
G S G ST G S S G G N+
Sbjct: 168 GGS---------GGSSTPGGSGSSSGGGAGSSNS 192
>gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo
sapiens]
Length = 1386
Score = 33.5 bits (75), Expect = 0.55
Identities = 60/278 (21%), Positives = 100/278 (35%), Gaps = 32/278 (11%)
Query: 307 VTRPDSESSCVLSELH---PLVLPRVPQSKVLYITSNPMSLCQASRHQPNVNDLLVHGMP 363
+T P S C+++ P P Q +T +P Q P+++ + +P
Sbjct: 1123 LTEPSSSGGCLVTPSRRETPSPTPSYGQQSTATLTPSPPDPPQPPTDMPHLHQM-PRRVP 1181
Query: 364 LQPRN-LSLMDKLLDLDDKLLMRPGSSTILSTRNWPNRAVEFSTSSLSYTVQSTRRRNPP 422
L P + LS+ +L + + G+ S P+ A ++S+ T Q PP
Sbjct: 1182 LGPSSPLSVSQPMLGIREARPAGLGAGPAASPHLSPSPAPSTASSAPGRTWQGNGEMTPP 1241
Query: 423 PRTLHPISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTPLSRNNLLPPIGTAE-VE 481
+ PR+ R + P A SP L L PP A
Sbjct: 1242 -------------LQGPRA-----RFRKKPKALPYRRENSPGDLPPPPLPPPEEEASWAL 1283
Query: 482 HVSTVGPQRQMKPH--GDSSRAQSAVVDEPNYQQPQERLLLPDFFPRPNTTQSFLLDTQY 539
+ G ++ G+ Q+ + P E LP + RP SFL Q
Sbjct: 1284 ELRAAGSMSSLERERSGERKAVQAVPLAAQRVLHPDEEAWLP--YSRP----SFLSRGQG 1337
Query: 540 RRSCAVEYPHQARPGRGSAGPQLHGSTKSQSGGRPVSR 577
+C+ + +R S G + G ++S+S R S+
Sbjct: 1338 TSTCSTAGSNSSRGSSSSRGSRGPGRSRSRSQSRSQSQ 1375
>gi|148806908 fibronectin type III domain containing 1 [Homo
sapiens]
Length = 1894
Score = 33.1 bits (74), Expect = 0.72
Identities = 56/258 (21%), Positives = 86/258 (33%), Gaps = 48/258 (18%)
Query: 339 SNPMSLCQASRHQPNVNDLLVHGMPLQPRNLSLMDKLLDLDDKLLMRPGSSTILSTRNWP 398
S+P AS P+V P P+ + D LLDL +K+L G+ R
Sbjct: 478 SSPSPRAPASSQHPSV--------PASPQGRNAKDLLLDLKNKILANGGAPRKPQLRAKK 529
Query: 399 NRAVEFSTSSLSYTVQSTRRRNPP---------PRTLHPIST-SHSCAETPRSVEEILRG 448
++ ++ ++ + R + P RTL P S HS R+
Sbjct: 530 AEELDLQSTEITGEEELGSREDSPMSPSDTQDQKRTLRPPSRHGHSVVAPGRTAVR---- 585
Query: 449 ARVPVAP--DSLSSP--SPTPLSRNNLLPPIGTAEVEHVSTVGPQRQMKPHGDSSRAQSA 504
AR+P P + + P S R P + H ST G +P +S +
Sbjct: 586 ARMPALPRREGVDKPGFSLATQPRPGAPPSASASPAHHASTQGTSH--RPSLPASLNDND 643
Query: 505 VVDEPNYQQPQERLLLPDFFPRPNTTQSFLLDTQYRRSCAVEYPHQARPGRGSAGPQLHG 564
+VD ++ L F +P S P R S L
Sbjct: 644 LVDSDEDERAVGSLHPKGAFAQPRPALS--------------------PSRQSPSSVLRD 683
Query: 565 STKSQSGGRPVSRTRQGP 582
+ G +P S R+ P
Sbjct: 684 RSSVHPGAKPASPARRTP 701
Score = 31.6 bits (70), Expect = 2.1
Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 4/121 (3%)
Query: 461 PSPTPLSRNNLLPPIGTAEVEHVSTVGPQRQMKPHGDSSRAQSAVVDEPNYQQPQERLLL 520
P P S P G AE + ++ P R PHG SSR + +P+ P +
Sbjct: 689 PGAKPASPARRTPHSGAAEEDSSASAPPSRLSPPHGGSSR---LLPTQPHLSSPLSKGGK 745
Query: 521 P-DFFPRPNTTQSFLLDTQYRRSCAVEYPHQARPGRGSAGPQLHGSTKSQSGGRPVSRTR 579
+ P N+ S + Q G ++ + HG + GGR T
Sbjct: 746 DGEDAPATNSNAPSRSTMSSSVSSHLSSRTQVSEGAEASDGESHGDGDREDGGRQAEATA 805
Query: 580 Q 580
Q
Sbjct: 806 Q 806
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 33.1 bits (74), Expect = 0.72
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 405 STSSLSYTVQSTRRRNPPPRTLHPISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPT 464
+T+ S ST R PP T P+ST+ + ++ L R PV S +S SPT
Sbjct: 1909 TTADGSSMPTSTPREGRPPLTSIPVSTTTVASSEINTLSTTLADTRTPVTTYSQASSSPT 1968
Query: 465 PLSRNNLLPP 474
++ P
Sbjct: 1969 TADGTSMPTP 1978
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 32.7 bits (73), Expect = 0.94
Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 30/174 (17%)
Query: 348 SRHQPNVNDLLVHGMPLQPRNLSLMDKLLDLDDKLLMRPGSSTILSTRNWPNRAVEFSTS 407
SRH P+V+ L H L P+ + + L ++ R W R ++
Sbjct: 851 SRHLPSVSSLPFHPQ-LHPQQMIISRHL-------------PSVCGERLWRLRGPLPPSA 896
Query: 408 SLSYTVQSTRRRNPPPRTLHPISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTPLS 467
+ S R+ P P + P S + ++ E LRG P A D+L +PS L+
Sbjct: 897 DDNLKTPSKRQLTPLPPSAPP-----SADDNIKTPAERLRGPLPPSADDNLKTPSERQLT 951
Query: 468 RNNLLPPIGTAEVEHVSTVGPQRQMKPHGDSSRAQSAVVDEPNYQQPQERLLLP 521
LPP + +R P S+ + N + P ER L P
Sbjct: 952 P---LPPSAPPSADDNIKTPAERLRGPLPPSA--------DDNLKTPSERQLTP 994
Score = 30.0 bits (66), Expect = 6.1
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 13/105 (12%)
Query: 419 RNPPPRTLHPI--STSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTPLSRNNLLPPIG 476
+ P R L P+ S S + ++ E LRG P A D+L +PS L+ LPP
Sbjct: 348 KTPSERQLTPLPPSAPPSADDNIKTTAERLRGPLPPSADDNLKTPSERQLTP---LPPSA 404
Query: 477 TAEVEHVSTVGPQRQMKPHGDSSRAQSAVVDEPNYQQPQERLLLP 521
+ +K + R + N + P ER L P
Sbjct: 405 PPSADD--------NIKTPAEHLRGPLPPSADDNLKTPSERQLTP 441
>gi|42544233 leucine rich repeat neuronal 2 [Homo sapiens]
Length = 713
Score = 32.7 bits (73), Expect = 0.94
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 307 VTRPDSESSCVLSELHPLVLPRVPQSKVLYITSNPMSLC--QASRHQPNVNDLLVHGMPL 364
+T+ D ++ LS +HP +PQ + L + +N +S Q PN+ ++ +HG P+
Sbjct: 312 LTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPI 371
Query: 365 Q 365
+
Sbjct: 372 R 372
>gi|68299795 chromodomain helicase DNA binding protein 1 [Homo
sapiens]
Length = 1710
Score = 32.7 bits (73), Expect = 0.94
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 24 LNHHPPPEKLEEISPTSDSHEKDTSSQSKSDITRESSFTSADTGNSLSAFPSYTGAGIST 83
+N H E + S S + D+ S S S + + +G+S S +G+ S
Sbjct: 1 MNGHSDEESVRNSSGESSQSDDDSGSASGSG-------SGSSSGSSSDGSSSQSGSSDSD 53
Query: 84 EGSSDFSWGYGELDQNATEKVQTMFTAID---------ELLYEQKLSVHTKSLQEECQQ 133
GS S E D + KVQ +D +L Q+ ++ K Q++ QQ
Sbjct: 54 SGSESGSQSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAILKKQQQQQQQQ 112
>gi|42544231 leucine rich repeat neuronal 2 [Homo sapiens]
Length = 713
Score = 32.7 bits (73), Expect = 0.94
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 307 VTRPDSESSCVLSELHPLVLPRVPQSKVLYITSNPMSLC--QASRHQPNVNDLLVHGMPL 364
+T+ D ++ LS +HP +PQ + L + +N +S Q PN+ ++ +HG P+
Sbjct: 312 LTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPI 371
Query: 365 Q 365
+
Sbjct: 372 R 372
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 32.3 bits (72), Expect = 1.2
Identities = 40/154 (25%), Positives = 57/154 (37%), Gaps = 26/154 (16%)
Query: 423 PRTLHPISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTPLSRNNLLPPIGTAEVEH 482
P T P S S A S+E L G + +P S P+PTPL +P
Sbjct: 94 PDTSSPGSLSPPPATLSSSLEAFLSGPQAAPSPLSPPQPAPTPLKMYPSMPAF------- 146
Query: 483 VSTVGPQRQMKPHGDSSRAQSAVVDEPNYQQPQERLLLPDFFPRPNTTQSFLLDTQYRRS 542
+ GP G + + + QP LLP FP P Q+ +
Sbjct: 147 --SPGP-------GIKEESVPLSILQTPTPQPLPGALLPQSFPAP-------APPQFSST 190
Query: 543 CAVEYPHQARPGRGSAGPQLHGSTKSQSGGRPVS 576
+ YP + PG S G G+T+ G P++
Sbjct: 191 PVLGYP--SPPGGFSTGSP-PGNTQQPLPGLPLA 221
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 32.3 bits (72), Expect = 1.2
Identities = 40/154 (25%), Positives = 57/154 (37%), Gaps = 26/154 (16%)
Query: 423 PRTLHPISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTPLSRNNLLPPIGTAEVEH 482
P T P S S A S+E L G + +P S P+PTPL +P
Sbjct: 64 PDTSSPGSLSPPPATLSSSLEAFLSGPQAAPSPLSPPQPAPTPLKMYPSMPAF------- 116
Query: 483 VSTVGPQRQMKPHGDSSRAQSAVVDEPNYQQPQERLLLPDFFPRPNTTQSFLLDTQYRRS 542
+ GP G + + + QP LLP FP P Q+ +
Sbjct: 117 --SPGP-------GIKEESVPLSILQTPTPQPLPGALLPQSFPAP-------APPQFSST 160
Query: 543 CAVEYPHQARPGRGSAGPQLHGSTKSQSGGRPVS 576
+ YP + PG S G G+T+ G P++
Sbjct: 161 PVLGYP--SPPGGFSTGSP-PGNTQQPLPGLPLA 191
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 32.3 bits (72), Expect = 1.2
Identities = 46/181 (25%), Positives = 61/181 (33%), Gaps = 26/181 (14%)
Query: 418 RRNPPPRTLHPISTSHSCAETPRSVEEILRGARVPVAPD----SLSSPSPTPLSRNNLLP 473
++ PPR S TP + L A P P +L + P +N P
Sbjct: 915 KKKKPPRKK---KNSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDNSGPKLPEFSNRPP 971
Query: 474 PIGTAEVEHVSTVGPQRQMKPHGDSSRAQSAVVDEPNYQQPQERLLLPDFFPRPNTTQS- 532
+ VE P +QM P A +P QQPQ +L P P+ QS
Sbjct: 972 GYPSQPVEQ----RPLQQMPPQ---LMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQPQSQ 1024
Query: 533 -----------FLLDTQYRRSCAVEYPHQARPGRGSAGPQLHGSTKSQSGGRPVSRTRQG 581
L+ Q +S + P RG P QSG PV + QG
Sbjct: 1025 QQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVMVSLQG 1084
Query: 582 P 582
P
Sbjct: 1085 P 1085
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 32.3 bits (72), Expect = 1.2
Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query: 405 STSSLSYTVQSTRRRNPPPRTLHPISTSHSCAE-TPRSVEEILRGARVPVA--PDSLSSP 461
S SS S ST + T HP TS S TP G R PVA + SS
Sbjct: 1736 SRSSFSTAKTSTSLHSHTSSTHHPEVTSTSTTSITPNHTST---GTRTPVAHTTSATSSR 1792
Query: 462 SPTPLSRNNLLPPIGTAEVEHVSTVGP 488
PTP + ++ PP GT +S+ GP
Sbjct: 1793 LPTPFTTHS--PPTGTTP---ISSTGP 1814
>gi|167621456 kinase suppressor of ras 2 [Homo sapiens]
Length = 921
Score = 32.0 bits (71), Expect = 1.6
Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 23/149 (15%)
Query: 386 PGSSTILSTRNWPNRAVEFSTSSLSYTVQSTRRRNPPPRTLHPISTSHSCAETPRSVEEI 445
P ++ R P R V T S+ + + R+ PPR S H P++ +
Sbjct: 425 PPCHLLIIHRGDPARLVR--TESVPCDINNPLRK--PPR----YSDLHISQTLPKTNKIN 476
Query: 446 LRGARVPVAPDSLSSP----SPTPLSRNNLLPPIGTAEVEHVSTVGPQRQMKPHGDSSRA 501
VP PDS S+P S TP S LPP T P + P +R
Sbjct: 477 KDHIPVPYQPDSSSNPSSTTSSTPSSPAPPLPPSAT----------PPSPLHPSPQCTRQ 526
Query: 502 QSAV-VDEPNYQQPQERLLLPDFFPRPNT 529
Q + +Y + +++ + PD P P T
Sbjct: 527 QKNFNLPASHYYKYKQQFIFPDVVPVPET 555
>gi|21327710 nucleosome assembly protein 1-like 3 [Homo sapiens]
Length = 506
Score = 31.6 bits (70), Expect = 2.1
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
Query: 34 EEISPTSDSHEKDTSSQSKSDITRESSFTSADTGNSLSAFPSYTGAGISTEGSSDFSWGY 93
E S TSDS E+ SS S S T +SS +S+ +G+S + S + +G ++ S +
Sbjct: 21 EMASSTSDSGEESDSSSSSSS-TSDSSSSSSTSGSSSGSGSSSSSSGSTSSRSRLYRKKR 79
Query: 94 GELDQNATEKVQTMFTAIDELLYEQKLSVHT-KSLQEECQQWTASF-PHLRILGRQIITP 151
+ +D L + V +++Q+EC + F + L R+
Sbjct: 80 VPEPSRRARRAPLGTNFVDRLPQAVRNRVQALRNIQDECDKVDTLFLKAIHDLERKYAEL 139
Query: 152 SEGYRLYPRSPSAVSASYETT 172
++ LY R ++A YE T
Sbjct: 140 NK--PLYDRRFQIINAEYEPT 158
>gi|25121978 deleted in azoospermia-like [Homo sapiens]
Length = 295
Score = 31.6 bits (70), Expect = 2.1
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 411 YTVQSTRRRNPPPRTLHPISTSHSCAET-PRSVEEILRGARVPVAPDSLSSPSPTPLSRN 469
+T +T P T++PI+ T P S +++ G ++PV + P R+
Sbjct: 143 WTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVITGYQLPVYNYQMPPQWPVGEQRS 202
Query: 470 NLLPPIGTAEVEHVSTVGPQRQMKPH 495
++PP +A H + V P ++ P+
Sbjct: 203 YVVPPAYSAVNYHCNEVDPGAEVVPN 228
>gi|28373194 adhesion regulating molecule 1 precursor [Homo sapiens]
Length = 407
Score = 31.6 bits (70), Expect = 2.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Query: 421 PPPRTLHPISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTP 465
PP + S S S A TP S R P AP + S+ SP+P
Sbjct: 200 PPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSP 244
>gi|28373192 adhesion regulating molecule 1 precursor [Homo sapiens]
Length = 407
Score = 31.6 bits (70), Expect = 2.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Query: 421 PPPRTLHPISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTP 465
PP + S S S A TP S R P AP + S+ SP+P
Sbjct: 200 PPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSP 244
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 31.6 bits (70), Expect = 2.1
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 11/122 (9%)
Query: 417 RRRNPPPRTLHPISTSH---SCAETPRSVEEILRGARVPVA-----PDSLSSPSPTPLSR 468
+++ PP P T H S + P+S L+ ++ P + P SP+P P +
Sbjct: 479 QQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQ 538
Query: 469 NNLLP-PIGTAEVEHVSTVGPQRQMKPH--GDSSRAQSAVVDEPNYQQPQERLLLPDFFP 525
+ P P +Q +P S+ +Q A +P QQ Q+ FP
Sbjct: 539 STTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFP 598
Query: 526 RP 527
P
Sbjct: 599 PP 600
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,642,373
Number of Sequences: 37866
Number of extensions: 1192369
Number of successful extensions: 4054
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 3813
Number of HSP's gapped (non-prelim): 294
length of query: 582
length of database: 18,247,518
effective HSP length: 108
effective length of query: 474
effective length of database: 14,157,990
effective search space: 6710887260
effective search space used: 6710887260
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.