| Name: LCE6A | Sequence: fasta or formatted (80aa) | NCBI GI: 190610047 | |
|
Description: late cornified envelope 6A
|
Referenced in: Late Cornified Envelope Family
| ||
|
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 3.8 3 1 C cysteine 8.8 7 1 D aspartate 1.2 1 1 E glutamate 7.5 6 3 F phenylalanine 0.0 0 0 G glycine 5.0 4 1 H histidine 3.8 3 1 I isoleucine 0.0 0 0 K lysine 7.5 6 1 L leucine 3.8 3 1 M methionine 1.2 1 1 N asparagine 2.5 2 1 P proline 13.8 11 2 Q glutamine 10.0 8 2 R arginine 8.8 7 2 S serine 12.5 10 3 T threonine 3.8 3 2 V valine 2.5 2 1 W tryptophan 1.2 1 1 Y tyrosine 2.5 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 late cornified envelope 6A LCE3A 0.115 late cornified envelope 3A LCE5A 0.083 late cornified envelope 5A LCE3D 0.077 late cornified envelope 3D LCE3E 0.071 late cornified envelope 3E LCE2A 0.071 late cornified envelope 2A LCE3B 0.064 late cornified envelope 3B LCE4A 0.051 late cornified envelope 4A LCE3C 0.051 late cornified envelope 3C CCDC157 0.051 coiled-coil domain containing 157 SPRR1A 0.051 small proline-rich protein 1A ZNF462 0.045 zinc finger protein 462 SPRR1B 0.045 small proline-rich protein 1B RARA 0.045 retinoic acid receptor, alpha isoform 2 LCE2C 0.038 late cornified envelope 2C NFX1 0.032 nuclear transcription factor, X-box binding 1 isofor... NFX1 0.032 nuclear transcription factor, X-box binding 1 isofor... LCE2B 0.032 late cornified envelope 2B LCE2D 0.032 late cornified envelope 2D PRB4 0.032 proline-rich protein BstNI subfamily 4 precursor [Ho... DVL1 0.026 dishevelled 1 ARID1A 0.026 AT rich interactive domain 1A isoform a ARID1A 0.026 AT rich interactive domain 1A isoform b KCNN3 0.019 small conductance calcium-activated potassium chann... MADCAM1 0.019 mucosal vascular addressin cell adhesion molecule 1... LCE1B 0.019 late cornified envelope 1B CIDEA 0.019 cell death-inducing DFFA-like effector a isoform 2 [... CIDEA 0.019 cell death-inducing DFFA-like effector a isoform 1 [H... HCFC1R1 0.019 host cell factor C1 regulator 1 (XPO1 dependant) iso... HCFC1R1 0.019 host cell factor C1 regulator 1 (XPO1 dependant) isof...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
