NUDCD1 10478

Name: NUDCD1	Sequence: fasta or formatted (554aa)		NCBI GI: 189571679
Description: NudC domain containing 1 isoform 2		Referenced in: Dynein and Dynactin
Other entries for this name: alt prot [583aa] NudC domain containing 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 29 2 C cysteine 2.2 12 1 D aspartate 6.5 36 2 E glutamate 8.5 47 2 F phenylalanine 3.8 21 2 G glycine 4.7 26 1 H histidine 2.7 15 1 I isoleucine 6.9 38 3 K lysine 6.0 33 2 L leucine 10.6 59 3 M methionine 2.5 14 1 N asparagine 4.9 27 1 P proline 3.8 21 2 Q glutamine 4.3 24 2 R arginine 4.0 22 2 S serine 7.4 41 3 T threonine 5.4 30 2 V valine 5.1 28 2 W tryptophan 1.8 10 1 Y tyrosine 3.8 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NudC domain containing 1 isoform 2 NUDCD1 0.979 NudC domain containing 1 isoform 1 NUDC 0.022 nuclear distribution gene C homolog NUDCD2 0.017 NudC domain containing 2 SUGT1 0.011 suppressor of G2 allele of SKP1 isoform b SUGT1 0.011 suppressor of G2 allele of SKP1 isoform a NUDCD3 0.011 NudC domain containing 3 USP19 0.007 ubiquitin thioesterase 19 CCDC73 0.006 sarcoma antigen NY-SAR-79 LOC642574 0.006 PREDICTED: IQ motif and ankyrin repeat domain-conta... LOC642574 0.005 PREDICTED: IQ motif and ankyrin repeat domain-conta... MYCBP2 0.005 MYC binding protein 2 CMYA5 0.005 cardiomyopathy associated 5 SDF4 0.005 stromal cell derived factor 4 isoform 1 precursor [Ho... SYNE2 0.005 spectrin repeat containing, nuclear envelope 2 isof... SYNE2 0.005 spectrin repeat containing, nuclear envelope 2 isof... SYNE2 0.005 spectrin repeat containing, nuclear envelope 2 isofo... SYNE2 0.005 spectrin repeat containing, nuclear envelope 2 isofo... RP5-1022P6.2 0.005 hypothetical protein LOC56261 ADAMTS3 0.004 ADAM metallopeptidase with thrombospondin type 1 mot... ZNF585B 0.004 zinc finger protein 585B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.