NUDCD3 2655

Name: NUDCD3	Sequence: fasta or formatted (361aa)		NCBI GI: 122939165
Description: NudC domain containing 3		Referenced in: Dynein and Dynactin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 28 4 C cysteine 0.3 1 1 D aspartate 5.3 19 2 E glutamate 11.6 42 4 F phenylalanine 3.6 13 1 G glycine 6.4 23 1 H histidine 2.8 10 1 I isoleucine 3.6 13 1 K lysine 6.6 24 2 L leucine 8.0 29 2 M methionine 2.5 9 1 N asparagine 2.8 10 1 P proline 6.4 23 2 Q glutamine 6.1 22 1 R arginine 5.5 20 2 S serine 5.3 19 4 T threonine 3.3 12 2 V valine 8.6 31 2 W tryptophan 1.4 5 2 Y tyrosine 2.2 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NudC domain containing 3 NUDC 0.157 nuclear distribution gene C homolog UPF3A 0.020 UPF3 regulator of nonsense transcripts homolog A iso... UPF3A 0.020 UPF3 regulator of nonsense transcripts homolog A iso... DCTN1 0.020 dynactin 1 isoform 4 DCTN1 0.020 dynactin 1 isoform 3 SHROOM4 0.019 shroom family member 4 MYST4 0.017 MYST histone acetyltransferase (monocytic leukemia)... NEK1 0.017 NIMA-related kinase 1 AIPL1 0.017 aryl hydrocarbon receptor interacting protein-like 1... AIPL1 0.017 aryl hydrocarbon receptor interacting protein-like 1... AIPL1 0.017 aryl hydrocarbon receptor interacting protein-like 1... NEFM 0.017 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.017 neurofilament, medium polypeptide 150kDa isoform 2 ... MYO10 0.017 myosin X NUDCD1 0.017 NudC domain containing 1 isoform 2 NUDCD1 0.017 NudC domain containing 1 isoform 1 NUDCD2 0.017 NudC domain containing 2 DCTN1 0.016 dynactin 1 isoform 2 DCTN1 0.016 dynactin 1 isoform 1 ZFHX2 0.016 PREDICTED: zinc finger homeobox 2 ZFHX2 0.016 PREDICTED: zinc finger homeobox 2 ZFHX2 0.016 PREDICTED: zinc finger homeobox 2 BASP1 0.014 brain abundant, membrane attached signal protein 1 [... GIGYF1 0.014 PERQ amino acid rich, with GYF domain 1 HNRNPUL2 0.014 heterogeneous nuclear ribonucleoprotein U-like 2 [H... CENPT 0.013 centromere protein T SMARCE1 0.013 SWI/SNF-related matrix-associated actin-dependent re... PELP1 0.013 proline, glutamic acid and leucine rich protein 1 [... MYH11 0.013 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.