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Search of human proteins with 113411363
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113411363 PREDICTED: hypothetical protein [Homo sapiens]
(168 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113411363 PREDICTED: hypothetical protein [Homo sapiens] 346 5e-96
gi|113411347 PREDICTED: hypothetical protein [Homo sapiens] 346 5e-96
gi|4505807 phosphatidylinositol 4-kinase type 3 alpha isoform 1 ... 32 0.26
gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform ... 32 0.26
gi|170016023 hypothetical protein LOC100130613 [Homo sapiens] 32 0.26
gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens] 31 0.44
gi|169205218 PREDICTED: similar to hCG2045644 [Homo sapiens] 31 0.44
gi|169204294 PREDICTED: similar to hCG2045644 [Homo sapiens] 31 0.44
gi|224458295 hypothetical protein LOC374973 [Homo sapiens] 31 0.57
gi|41054804 hypothetical protein LOC84970 isoform b [Homo sapiens] 30 1.3
gi|197927133 hypothetical protein LOC84970 isoform a [Homo sapiens] 30 1.3
gi|239745596 PREDICTED: polycystin 1-like 3 [Homo sapiens] 29 1.7
gi|31559825 polycystin 1-like 3 [Homo sapiens] 29 1.7
gi|41281907 StAR-related lipid transfer (START) domain containin... 29 1.7
gi|16445031 StAR-related lipid transfer (START) domain containin... 29 1.7
gi|41281898 StAR-related lipid transfer (START) domain containin... 29 1.7
gi|24497515 homeobox A3 isoform b [Homo sapiens] 29 2.2
gi|24497513 homeobox A3 isoform a [Homo sapiens] 29 2.2
gi|13562112 homeobox A3 isoform a [Homo sapiens] 29 2.2
gi|21704281 junctophilin 2 isoform 1 [Homo sapiens] 29 2.2
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 29 2.2
gi|157384973 tenascin R [Homo sapiens] 28 3.7
gi|171543850 RUN domain containing 1 [Homo sapiens] 28 3.7
gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ... 28 4.8
gi|145309304 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... 27 6.3
>gi|113411363 PREDICTED: hypothetical protein [Homo sapiens]
Length = 168
Score = 346 bits (888), Expect = 5e-96
Identities = 168/168 (100%), Positives = 168/168 (100%)
Query: 1 MGISRTAPQGTGGIILQGPLLPMKDTREMLLRKLELCAFDHLVCPPILPSEGLGERRNAP 60
MGISRTAPQGTGGIILQGPLLPMKDTREMLLRKLELCAFDHLVCPPILPSEGLGERRNAP
Sbjct: 1 MGISRTAPQGTGGIILQGPLLPMKDTREMLLRKLELCAFDHLVCPPILPSEGLGERRNAP 60
Query: 61 SEGLGERRNARGRCALQRLYQHQKKAGRVFLEEGGRRPAVAGRLAGQERPISAVLSSGLQ 120
SEGLGERRNARGRCALQRLYQHQKKAGRVFLEEGGRRPAVAGRLAGQERPISAVLSSGLQ
Sbjct: 61 SEGLGERRNARGRCALQRLYQHQKKAGRVFLEEGGRRPAVAGRLAGQERPISAVLSSGLQ 120
Query: 121 HPTWRTPLPLSSTVALLSWCPLNAYLPFVPPNLSRPPQVTHFLSCSEL 168
HPTWRTPLPLSSTVALLSWCPLNAYLPFVPPNLSRPPQVTHFLSCSEL
Sbjct: 121 HPTWRTPLPLSSTVALLSWCPLNAYLPFVPPNLSRPPQVTHFLSCSEL 168
>gi|113411347 PREDICTED: hypothetical protein [Homo sapiens]
Length = 168
Score = 346 bits (888), Expect = 5e-96
Identities = 168/168 (100%), Positives = 168/168 (100%)
Query: 1 MGISRTAPQGTGGIILQGPLLPMKDTREMLLRKLELCAFDHLVCPPILPSEGLGERRNAP 60
MGISRTAPQGTGGIILQGPLLPMKDTREMLLRKLELCAFDHLVCPPILPSEGLGERRNAP
Sbjct: 1 MGISRTAPQGTGGIILQGPLLPMKDTREMLLRKLELCAFDHLVCPPILPSEGLGERRNAP 60
Query: 61 SEGLGERRNARGRCALQRLYQHQKKAGRVFLEEGGRRPAVAGRLAGQERPISAVLSSGLQ 120
SEGLGERRNARGRCALQRLYQHQKKAGRVFLEEGGRRPAVAGRLAGQERPISAVLSSGLQ
Sbjct: 61 SEGLGERRNARGRCALQRLYQHQKKAGRVFLEEGGRRPAVAGRLAGQERPISAVLSSGLQ 120
Query: 121 HPTWRTPLPLSSTVALLSWCPLNAYLPFVPPNLSRPPQVTHFLSCSEL 168
HPTWRTPLPLSSTVALLSWCPLNAYLPFVPPNLSRPPQVTHFLSCSEL
Sbjct: 121 HPTWRTPLPLSSTVALLSWCPLNAYLPFVPPNLSRPPQVTHFLSCSEL 168
>gi|4505807 phosphatidylinositol 4-kinase type 3 alpha isoform 1
[Homo sapiens]
Length = 854
Score = 32.0 bits (71), Expect = 0.26
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 15 ILQGPLLPMKDTREMLLRKLELCAFDHLVCPPILPSEG 52
+L ++P R +L K+ AFD+ CPP P++G
Sbjct: 111 LLHADVVPNATIRNVLREKIYSTAFDYFSCPPKFPTQG 148
>gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform 2
[Homo sapiens]
Length = 2044
Score = 32.0 bits (71), Expect = 0.26
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 15 ILQGPLLPMKDTREMLLRKLELCAFDHLVCPPILPSEG 52
+L ++P R +L K+ AFD+ CPP P++G
Sbjct: 1301 LLHADVVPNATIRNVLREKIYSTAFDYFSCPPKFPTQG 1338
>gi|170016023 hypothetical protein LOC100130613 [Homo sapiens]
Length = 298
Score = 32.0 bits (71), Expect = 0.26
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 23/87 (26%)
Query: 94 GGRRPAVAGRLAGQERPISAVLSSGLQHP--TWRTPLPLSSTVALLSWCP---------- 141
G R A G+LA P+ G HP W P+PLSS+ L C
Sbjct: 198 GNTRIACRGKLAHVSFPLR-----GPCHPMHNWPRPIPLSSSTPGLPSCSTVHCFIPPRP 252
Query: 142 ------LNAYLPFVPPNLSRPPQVTHF 162
L LPF PP + PP ++F
Sbjct: 253 PIFNPFLTMPLPFAPPPIFGPPLPSYF 279
>gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens]
Length = 363
Score = 31.2 bits (69), Expect = 0.44
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 40 DHLVCPPILPSEG--LGERRNAPSEGLGERRNARGRCALQRLYQHQKKAGRVFLEEGGRR 97
D L P P G LG RR E RR+AR R L+RL Q ++ L E GRR
Sbjct: 69 DELNGPRASPHAGVILGRRRRPSHEA---RRSARLRPGLRRLQQRERPPRPGLLLESGRR 125
Query: 98 PAVAGRLAGQERPISA 113
+ + P+ A
Sbjct: 126 RDSRRHVTSSQPPLPA 141
>gi|169205218 PREDICTED: similar to hCG2045644 [Homo sapiens]
Length = 301
Score = 31.2 bits (69), Expect = 0.44
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 40 DHLVCPPILPSEG--LGERRNAPSEGLGERRNARGRCALQRLYQHQKKAGRVFLEEGGRR 97
D L P P G LG RR E RR+AR R L+RL Q ++ L E GRR
Sbjct: 69 DELNGPRASPHAGVILGRRRRPSHEA---RRSARLRPGLRRLQQRERPPRPGLLLESGRR 125
Query: 98 PAVAGRLAGQERPISA 113
+ + P+ A
Sbjct: 126 RDSRRHVTSSQPPLPA 141
>gi|169204294 PREDICTED: similar to hCG2045644 [Homo sapiens]
Length = 301
Score = 31.2 bits (69), Expect = 0.44
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 40 DHLVCPPILPSEG--LGERRNAPSEGLGERRNARGRCALQRLYQHQKKAGRVFLEEGGRR 97
D L P P G LG RR E RR+AR R L+RL Q ++ L E GRR
Sbjct: 69 DELNGPRASPHAGVILGRRRRPSHEA---RRSARLRPGLRRLQQRERPPRPGLLLESGRR 125
Query: 98 PAVAGRLAGQERPISA 113
+ + P+ A
Sbjct: 126 RDSRRHVTSSQPPLPA 141
>gi|224458295 hypothetical protein LOC374973 [Homo sapiens]
Length = 206
Score = 30.8 bits (68), Expect = 0.57
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 110 PISAVLSSGLQHPTWRTPLPLSSTVALLSWCPLNAYLPFVPPNLSRPPQVTHFLS 164
P+ L Q P R+P PL P+ +PF PP + PP + H +S
Sbjct: 127 PLQPALQLAPQQPQARSPFPL----------PIFQEVPFAPPLCNLPPLLNHSVS 171
>gi|41054804 hypothetical protein LOC84970 isoform b [Homo sapiens]
Length = 408
Score = 29.6 bits (65), Expect = 1.3
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 90 FLEEGGRRPAVAGRLAGQERPISAVLSSGLQHPTWRTPLPLSSTVALLSWCPLNAYLPFV 149
FL+ G P A R+ Q+ + L Q P + + S+ PL +Y+PFV
Sbjct: 288 FLQYQGLYPQQAARMPYQQA-LHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFV 346
Query: 150 PPNLSRPPQVTHFLSCS 166
PN P + +S +
Sbjct: 347 QPNYPYPQRTPPKMSAN 363
>gi|197927133 hypothetical protein LOC84970 isoform a [Homo sapiens]
Length = 598
Score = 29.6 bits (65), Expect = 1.3
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 90 FLEEGGRRPAVAGRLAGQERPISAVLSSGLQHPTWRTPLPLSSTVALLSWCPLNAYLPFV 149
FL+ G P A R+ Q+ + L Q P + + S+ PL +Y+PFV
Sbjct: 478 FLQYQGLYPQQAARMPYQQA-LHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFV 536
Query: 150 PPNLSRPPQVTHFLSCS 166
PN P + +S +
Sbjct: 537 QPNYPYPQRTPPKMSAN 553
>gi|239745596 PREDICTED: polycystin 1-like 3 [Homo sapiens]
Length = 1731
Score = 29.3 bits (64), Expect = 1.7
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Query: 79 LYQHQKKAGRVFLEEGGRRPAVAGRLAGQ-ERPISAVLSSGLQHPTWRTPLPLSSTVALL 137
LYQ KK R + P G L P+ A LS L HP + P LSS + +
Sbjct: 158 LYQRHKKTKRGVAIARDKMPPGPGHLPTTCHYPLPAHLSKTLCHPISQFPSVLSSITSQV 217
Query: 138 SWC---PLNAYLPFVPPNLSRPPQVTH 161
+ P + LP + L+ P VTH
Sbjct: 218 TSAASEPSSQPLPVI-TQLTMPVSVTH 243
>gi|31559825 polycystin 1-like 3 [Homo sapiens]
Length = 1732
Score = 29.3 bits (64), Expect = 1.7
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Query: 79 LYQHQKKAGRVFLEEGGRRPAVAGRLAGQ-ERPISAVLSSGLQHPTWRTPLPLSSTVALL 137
LYQ KK R + P G L P+ A LS L HP + P LSS + +
Sbjct: 158 LYQRHKKTKRGVAIARDKMPPGPGHLPTTCHYPLPAHLSKTLCHPISQFPSVLSSITSQV 217
Query: 138 SWC---PLNAYLPFVPPNLSRPPQVTH 161
+ P + LP + L+ P VTH
Sbjct: 218 TSAASEPSSQPLPVI-TQLTMPVSVTH 243
>gi|41281907 StAR-related lipid transfer (START) domain containing
13 isoform beta [Homo sapiens]
Length = 1105
Score = 29.3 bits (64), Expect = 1.7
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 11 TGGIILQGPLLPMKDTREMLLRKLELCAFDHLVCPPI-----LPSEGLGERRNAPSEGLG 65
TGG+++ GP+L + ++ +++ D PP LP G ++PSE
Sbjct: 273 TGGLVISGPMLQQEPESFKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSE--H 330
Query: 66 ERRNARGRCALQRLYQHQKKAGRVFLEE 93
C +R K G ++LE+
Sbjct: 331 SSSGVSTPCLKERKCHEANKRGGMYLED 358
>gi|16445031 StAR-related lipid transfer (START) domain containing
13 isoform gamma [Homo sapiens]
Length = 995
Score = 29.3 bits (64), Expect = 1.7
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 11 TGGIILQGPLLPMKDTREMLLRKLELCAFDHLVCPPI-----LPSEGLGERRNAPSEGLG 65
TGG+++ GP+L + ++ +++ D PP LP G ++PSE
Sbjct: 163 TGGLVISGPMLQQEPESFKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSE--H 220
Query: 66 ERRNARGRCALQRLYQHQKKAGRVFLEE 93
C +R K G ++LE+
Sbjct: 221 SSSGVSTPCLKERKCHEANKRGGMYLED 248
>gi|41281898 StAR-related lipid transfer (START) domain containing
13 isoform alpha [Homo sapiens]
Length = 1113
Score = 29.3 bits (64), Expect = 1.7
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 11 TGGIILQGPLLPMKDTREMLLRKLELCAFDHLVCPPI-----LPSEGLGERRNAPSEGLG 65
TGG+++ GP+L + ++ +++ D PP LP G ++PSE
Sbjct: 281 TGGLVISGPMLQQEPESFKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSE--H 338
Query: 66 ERRNARGRCALQRLYQHQKKAGRVFLEE 93
C +R K G ++LE+
Sbjct: 339 SSSGVSTPCLKERKCHEANKRGGMYLED 366
>gi|24497515 homeobox A3 isoform b [Homo sapiens]
Length = 285
Score = 28.9 bits (63), Expect = 2.2
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 10/54 (18%)
Query: 116 SSGLQHPTWRTPLP------LSSTVALLSWCPLNAYLPFVPPNLSRPPQVTHFL 163
SSG Q P+ R+P+P L+S +L++ P Y P PP S+PPQ T+ L
Sbjct: 100 SSGGQSPS-RSPVPPGAGGYLNSMHSLVNSVP---YEPQSPPPFSKPPQGTYGL 149
>gi|24497513 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 28.9 bits (63), Expect = 2.2
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 10/54 (18%)
Query: 116 SSGLQHPTWRTPLP------LSSTVALLSWCPLNAYLPFVPPNLSRPPQVTHFL 163
SSG Q P+ R+P+P L+S +L++ P Y P PP S+PPQ T+ L
Sbjct: 258 SSGGQSPS-RSPVPPGAGGYLNSMHSLVNSVP---YEPQSPPPFSKPPQGTYGL 307
>gi|13562112 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 28.9 bits (63), Expect = 2.2
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 10/54 (18%)
Query: 116 SSGLQHPTWRTPLP------LSSTVALLSWCPLNAYLPFVPPNLSRPPQVTHFL 163
SSG Q P+ R+P+P L+S +L++ P Y P PP S+PPQ T+ L
Sbjct: 258 SSGGQSPS-RSPVPPGAGGYLNSMHSLVNSVP---YEPQSPPPFSKPPQGTYGL 307
>gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]
Length = 696
Score = 28.9 bits (63), Expect = 2.2
Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 19/110 (17%)
Query: 52 GLGERRNAPSEGLGERRNARG---RCALQRLYQHQ--KKAGRVFLEEGGRRPAVAG---- 102
G G R PSEG G R AR R A++ L + V L +G AV
Sbjct: 518 GEGSRSVTPSEGAGRRSPARPATERMAIEALQAPPAPSREPEVALYQGYHSYAVRTTPPE 577
Query: 103 ----------RLAGQERPISAVLSSGLQHPTWRTPLPLSSTVALLSWCPL 142
++G E S+ ++ LQ PT R P P T A L P+
Sbjct: 578 PPPFEDQPEPEVSGSESAPSSPATAPLQAPTLRGPEPARETPAKLEPKPI 627
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 28.9 bits (63), Expect = 2.2
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 20/81 (24%)
Query: 48 LPSEGLGERRNAPSEGLGERRNARGRC----------ALQRLYQHQKKAGRVFLEEGGRR 97
LPS G G N PS L ++R R L L +H + + V EEGGR
Sbjct: 89 LPSSGYGT--NTPSSTLSSSSSSRERLHQLPFQPTPDELHFLSKHFRSSENVLDEEGGRS 146
Query: 98 PAVAGRLAGQERPISAVLSSG 118
P + RP S LS G
Sbjct: 147 PRL--------RPRSRSLSPG 159
>gi|157384973 tenascin R [Homo sapiens]
Length = 1358
Score = 28.1 bits (61), Expect = 3.7
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 100 VAGRLAGQERPISAVLSSGLQHPTWRTPLPLSSTVALLSWCPLNAYLPFV 149
VA + + P SA +S+ + PT +S TVA + W P A + F+
Sbjct: 485 VALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWIPPRAKVDFI 534
>gi|171543850 RUN domain containing 1 [Homo sapiens]
Length = 613
Score = 28.1 bits (61), Expect = 3.7
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 27 REMLLRKLELCAFDHLVCPPILPSEGLGERRNAPSEGL-GERRNARG 72
++ LLR+LE AF CP +L EG G+ + +GL G+R RG
Sbjct: 119 QQRLLRELEDFAFRG--CPHVLGYEGPGDPASDEGDGLPGDRPRLRG 163
>gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo
sapiens]
Length = 828
Score = 27.7 bits (60), Expect = 4.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 94 GGRRPAVAGRLAGQERPISAVLSSGLQHPTWRT 126
GG PA+ R++G RP + + + HP W +
Sbjct: 229 GGVGPALQTRMSGHPRPTGSPVLALASHPPWHS 261
>gi|145309304 cadherin EGF LAG seven-pass G-type receptor 3 [Homo
sapiens]
Length = 3312
Score = 27.3 bits (59), Expect = 6.3
Identities = 39/147 (26%), Positives = 57/147 (38%), Gaps = 7/147 (4%)
Query: 3 ISRTAPQGTGGIILQGPLLPMKDTREMLLRKLELCAFDH--LVCPPILPSEGLGERRNAP 60
+ + AP G+ G G + +++ L R +EL + LV P I+ S +R P
Sbjct: 2280 LGQRAPGGSPGSA--GLVRHLEEYAATLARNMELTYLNPMGLVTPNIMLSI---DRMEHP 2334
Query: 61 SEGLGERRNARGRCALQRLYQHQKKAGRVFLEEGGRRPAVAGRLAGQERPISAVLSSGLQ 120
S G RR R L R V L RP+ + L ++ SS +
Sbjct: 2335 SSPRGARRYPRYHSNLFRGQDAWDPHTHVLLPSQSPRPSPSEVLPTSSSIENSTTSSVVP 2394
Query: 121 HPTWRTPLPLSSTVALLSWCPLNAYLP 147
P P P S + LL + L LP
Sbjct: 2395 PPAPPEPEPGISIIILLVYRTLGGLLP 2421
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,911,684
Number of Sequences: 37866
Number of extensions: 390856
Number of successful extensions: 933
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 917
Number of HSP's gapped (non-prelim): 27
length of query: 168
length of database: 18,247,518
effective HSP length: 95
effective length of query: 73
effective length of database: 14,650,248
effective search space: 1069468104
effective search space used: 1069468104
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.