PKD1L3 25596

Name: PKD1L3	Sequence: fasta or formatted (1732aa)		NCBI GI: 31559825
Description: polycystin 1-like 3		Referenced in: Arachidonate, Prostaglandins, and Leukotrienes Kidney Taste Receptors
Other entries for this name: alt prot [1731aa] PREDICTED: polycystin 1-like 3 alt prot [1731aa] PREDICTED: polycystic kidney disease 1-like 3 alt prot [1732aa] PREDICTED: polycystic kidney disease 1-like 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 90 2 C cysteine 2.3 40 2 D aspartate 3.3 57 2 E glutamate 4.8 83 2 F phenylalanine 4.9 85 2 G glycine 4.7 82 2 H histidine 3.4 59 3 I isoleucine 5.6 97 2 K lysine 5.2 90 4 L leucine 13.2 228 3 M methionine 1.7 30 2 N asparagine 4.3 75 3 P proline 5.0 86 2 Q glutamine 5.1 88 2 R arginine 4.3 74 2 S serine 9.1 158 3 T threonine 6.4 110 2 V valine 6.8 117 2 W tryptophan 2.0 34 2 Y tyrosine 2.8 49 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 polycystin 1-like 3 PKD1L3 0.997 PREDICTED: polycystin 1-like 3 PKD1L3 0.997 PREDICTED: polycystic kidney disease 1-like 3 [Homo... PKD1L3 0.995 PREDICTED: polycystic kidney disease 1-like 3 [Homo... PKD1L2 0.148 polycystin 1-like 2 isoform a PKDREJ 0.045 receptor for egg jelly-like protein precursor PKD1 0.044 polycystin 1 isoform 2 precursor PKD1 0.044 polycystin 1 isoform 1 precursor PKD1L1 0.028 polycystin-1L1 PKD2 0.017 polycystin 2 LOXHD1 0.016 lipoxygenase homology domains 1 isoform 1 LOXHD1 0.016 lipoxygenase homology domains 1 isoform 2 LOXHD1 0.016 lipoxygenase homology domains 1 isoform 3 PKD2L1 0.014 polycystic kidney disease 2-like 1 PKD2L2 0.012 polycystic kidney disease 2-like 2 LOC100293597 0.009 PREDICTED: similar to hCG2036697 LOC100291435 0.009 PREDICTED: hypothetical protein XP_002347033 LOC100287651 0.009 PREDICTED: hypothetical protein XP_002342894 GPR97 0.006 G protein-coupled receptor 97 ALOX5 0.006 arachidonate 5-lipoxygenase GPR113 0.006 G-protein coupled receptor 113 isoform 1 GPR113 0.006 G-protein coupled receptor 113 isoform 2 GPR113 0.006 G-protein coupled receptor 113 isoform 3 KCNB2 0.005 potassium voltage-gated channel, Shab-related subfam... DENND5A 0.005 RAB6 interacting protein 1 DENND5B 0.005 DENN/MADD domain containing 5B KCNB1 0.005 potassium voltage-gated channel, Shab-related subfami... GPR56 0.005 G protein-coupled receptor 56 isoform b precursor [... GPR56 0.005 G protein-coupled receptor 56 isoform c precursor [... GPR56 0.005 G protein-coupled receptor 56 isoform b precursor [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.