POLA1 174

Name: POLA1	Sequence: fasta or formatted (1462aa)		NCBI GI: 106507301
Description: DNA-directed DNA polymerase alpha 1		Referenced in: DNA Polymerases Small RNAs in RNA Processing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 86 2 C cysteine 2.1 31 2 D aspartate 7.1 104 3 E glutamate 8.1 118 3 F phenylalanine 4.0 58 2 G glycine 5.3 77 2 H histidine 1.7 25 2 I isoleucine 5.6 82 2 K lysine 9.4 137 4 L leucine 9.2 134 4 M methionine 2.3 34 1 N asparagine 4.0 58 2 P proline 5.1 74 3 Q glutamine 4.7 68 2 R arginine 3.9 57 2 S serine 6.1 89 2 T threonine 4.4 64 2 V valine 6.9 101 2 W tryptophan 0.9 13 1 Y tyrosine 3.6 52 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DNA-directed DNA polymerase alpha 1 POLD1 0.062 DNA-directed DNA polymerase delta 1 REV3L 0.040 DNA polymerase zeta POLE 0.008 DNA-directed DNA polymerase epsilon MAK16 0.008 MAK16 homolog MYST4 0.005 MYST histone acetyltransferase (monocytic leukemia)... SUPT6H 0.005 suppressor of Ty 6 homolog PELP1 0.005 proline, glutamic acid and leucine rich protein 1 [... NAP1L3 0.004 nucleosome assembly protein 1-like 3 NRD1 0.004 nardilysin isoform a NIP30 0.004 hypothetical protein LOC80011 CCDC88A 0.004 coiled-coil domain containing 88A isoform 2 CCDC88A 0.004 coiled-coil domain containing 88A isoform 1 MAP1B 0.004 microtubule-associated protein 1B NSBP1 0.004 nucleosomal binding protein 1 CEBPZ 0.004 CCAAT/enhancer binding protein zeta ATAD2 0.004 ATPase family, AAA domain containing 2 ASH1L 0.004 absent, small, or homeotic 1-like EIF5B 0.004 eukaryotic translation initiation factor 5B NEFM 0.004 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.004 neurofilament, medium polypeptide 150kDa isoform 2 ... ELF2 0.004 E74-like factor 2 (ets domain transcription factor) i... CALD1 0.004 caldesmon 1 isoform 5 CALD1 0.004 caldesmon 1 isoform 2 CALD1 0.004 caldesmon 1 isoform 1 FLJ32682 0.004 hypothetical protein LOC220081 SF3B2 0.004 splicing factor 3B subunit 2 CCDC82 0.003 coiled-coil domain containing 82 PPM1G 0.003 protein phosphatase 1G PPM1G 0.003 protein phosphatase 1G Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.