NIP30 3214

Name: NIP30	Sequence: fasta or formatted (254aa)		NCBI GI: 13376429
Description: hypothetical protein LOC80011		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.5 9 2 C cysteine 1.6 4 1 D aspartate 5.9 15 2 E glutamate 14.2 36 3 F phenylalanine 2.8 7 1 G glycine 5.9 15 2 H histidine 0.8 2 1 I isoleucine 4.3 11 2 K lysine 11.4 29 2 L leucine 7.5 19 2 M methionine 0.8 2 1 N asparagine 4.7 12 2 P proline 5.1 13 1 Q glutamine 4.7 12 2 R arginine 6.3 16 2 S serine 10.2 26 3 T threonine 3.1 8 1 V valine 4.7 12 1 W tryptophan 0.4 1 1 Y tyrosine 2.0 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC80011 DBN1 0.058 drebrin 1 isoform b DBN1 0.058 drebrin 1 isoform a BAT2D1 0.056 HBxAg transactivated protein 2 LOC645202 0.054 PREDICTED: hypothetical protein LOC645202 LOC400352 0.052 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.052 PREDICTED: similar to Putative golgin subfamily A m... TCHH 0.052 trichohyalin LOC727832 0.052 golgi autoantigen, golgin subfamily a-like LOC283767 0.052 golgi autoantigen, golgin subfamily a-like MAP7 0.052 microtubule-associated protein 7 LOC440243 0.050 PREDICTED: Putative golgin subfamily A member 6-lik... LOC100133599 0.050 PREDICTED: hypothetical protein INCENP 0.048 inner centromere protein antigens 135/155kDa isofor... INCENP 0.048 inner centromere protein antigens 135/155kDa isofor... MAP4K4 0.046 mitogen-activated protein kinase kinase kinase kinas... MAP4K4 0.046 mitogen-activated protein kinase kinase kinase kinas... MAP4K4 0.046 mitogen-activated protein kinase kinase kinase kinas... WDR87 0.044 NYD-SP11 protein TNIK 0.044 TRAF2 and NCK interacting kinase isoform 8 TNIK 0.044 TRAF2 and NCK interacting kinase isoform 7 TNIK 0.044 TRAF2 and NCK interacting kinase isoform 4 TNIK 0.044 TRAF2 and NCK interacting kinase isoform 3 AP3D1 0.044 adaptor-related protein complex 3, delta 1 subunit ... CALD1 0.044 caldesmon 1 isoform 1 LOC283685 0.041 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC283685 0.041 PREDICTED: golgi autoantigen, golgin subfamily a-li... MYO6 0.041 myosin VI LOC100294088 0.039 PREDICTED: hypothetical protein, partial KIF16B 0.039 kinesin-like motor protein C20orf23 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.