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Search of human proteins with 103471997
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|103471997 DNA-directed RNA polymerase I A [Homo sapiens]
(1720 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|103471997 DNA-directed RNA polymerase I A [Homo sapiens] 3459 0.0
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 425 e-118
gi|39725938 polymerase (RNA) III (DNA directed) polypeptide A, 1... 403 e-112
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 60 1e-08
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 59 5e-08
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 56 3e-07
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 53 2e-06
gi|215422388 death-domain associated protein isoform a [Homo sap... 53 2e-06
gi|215422366 death-domain associated protein isoform b [Homo sap... 53 2e-06
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 53 3e-06
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 53 3e-06
gi|115529449 upstream binding transcription factor, RNA polymera... 53 3e-06
gi|115529451 upstream binding transcription factor, RNA polymera... 53 3e-06
gi|7657671 upstream binding transcription factor, RNA polymerase... 53 3e-06
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 53 3e-06
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 53 3e-06
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 53 3e-06
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 53 3e-06
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 53 3e-06
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 53 3e-06
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 52 4e-06
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 52 4e-06
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 52 4e-06
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 52 5e-06
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 51 8e-06
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 51 1e-05
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 51 1e-05
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 51 1e-05
gi|21361639 DIPB protein [Homo sapiens] 50 1e-05
gi|17975763 myelin transcription factor 1 [Homo sapiens] 50 1e-05
>gi|103471997 DNA-directed RNA polymerase I A [Homo sapiens]
Length = 1720
Score = 3459 bits (8970), Expect = 0.0
Identities = 1720/1720 (100%), Positives = 1720/1720 (100%)
Query: 1 MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS 60
MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS
Sbjct: 1 MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS 60
Query: 61 KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL 120
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
Sbjct: 61 KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL 120
Query: 121 LCQLRVLEVGALQAVYELERILNRFLEENPDPSASEIREELEQYTTEIVQNNLLGSQGAH 180
LCQLRVLEVGALQAVYELERILNRFLEENPDPSASEIREELEQYTTEIVQNNLLGSQGAH
Sbjct: 121 LCQLRVLEVGALQAVYELERILNRFLEENPDPSASEIREELEQYTTEIVQNNLLGSQGAH 180
Query: 181 VKNVCESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQKDS 240
VKNVCESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQKDS
Sbjct: 181 VKNVCESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQKDS 240
Query: 241 EPLGIEEAQIGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDGMESRFNPSVFFLD 300
EPLGIEEAQIGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDGMESRFNPSVFFLD
Sbjct: 241 EPLGIEEAQIGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDGMESRFNPSVFFLD 300
Query: 301 FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPEEVATPTT 360
FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPEEVATPTT
Sbjct: 301 FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPEEVATPTT 360
Query: 361 DEEKDSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMMDKYPGIRQI 420
DEEKDSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMMDKYPGIRQI
Sbjct: 361 DEEKDSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMMDKYPGIRQI 420
Query: 421 LEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL 480
LEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
Sbjct: 421 LEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL 480
Query: 481 RQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPATGAPKPQGTKIVCR 540
RQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPATGAPKPQGTKIVCR
Sbjct: 481 RQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPATGAPKPQGTKIVCR 540
Query: 541 HVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ 600
HVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
Sbjct: 541 HVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ 600
Query: 601 SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREHYMELVYRG 660
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREHYMELVYRG
Sbjct: 601 SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREHYMELVYRG 660
Query: 661 LTDKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKITGKAWVKET 720
LTDKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKITGKAWVKET
Sbjct: 661 LTDKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKITGKAWVKET 720
Query: 721 PRSVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC 780
PRSVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
Sbjct: 721 PRSVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC 780
Query: 781 LARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPQAVRAALNLPEAASYD 840
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPQAVRAALNLPEAASYD
Sbjct: 781 LARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPQAVRAALNLPEAASYD 840
Query: 841 EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQS 900
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQS
Sbjct: 841 EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQS 900
Query: 901 GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK 960
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
Sbjct: 901 GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK 960
Query: 961 PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG 1020
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
Sbjct: 961 PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG 1020
Query: 1021 EDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRADPKKALHHFRAIKKWQSKHP 1080
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRADPKKALHHFRAIKKWQSKHP
Sbjct: 1021 EDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRADPKKALHHFRAIKKWQSKHP 1080
Query: 1081 NTLLRRGAFLSYSQKIQEAVKALKLESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAA 1140
NTLLRRGAFLSYSQKIQEAVKALKLESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAA
Sbjct: 1081 NTLLRRGAFLSYSQKIQEAVKALKLESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAA 1140
Query: 1141 ACPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSLDRLRTLLQLKW 1200
ACPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSLDRLRTLLQLKW
Sbjct: 1141 ACPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSLDRLRTLLQLKW 1200
Query: 1201 QRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK 1260
QRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
Sbjct: 1201 QRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK 1260
Query: 1261 TPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFCMEEKQNKFQVYQLRFQ 1320
TPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFCMEEKQNKFQVYQLRFQ
Sbjct: 1261 TPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFCMEEKQNKFQVYQLRFQ 1320
Query: 1321 FLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKNNKASAFRNVNTRRATQRDLDNA 1380
FLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKNNKASAFRNVNTRRATQRDLDNA
Sbjct: 1321 FLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKNNKASAFRNVNTRRATQRDLDNA 1380
Query: 1381 GELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEN 1440
GELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEN
Sbjct: 1381 GELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEN 1440
Query: 1441 DDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMER 1500
DDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMER
Sbjct: 1441 DDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMER 1500
Query: 1501 RVQAVREIHPFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGIT 1560
RVQAVREIHPFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGIT
Sbjct: 1501 RVQAVREIHPFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGIT 1560
Query: 1561 RCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRV 1620
RCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRV
Sbjct: 1561 RCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRV 1620
Query: 1621 IEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQF 1680
IEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQF
Sbjct: 1621 IEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQF 1680
Query: 1681 LKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPLR 1720
LKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPLR
Sbjct: 1681 LKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPLR 1720
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 425 bits (1092), Expect = e-118
Identities = 384/1325 (28%), Positives = 594/1325 (44%), Gaps = 208/1325 (15%)
Query: 8 PWRRLQGISFGMYSAEELKKLSVKS--ITNPRYLDSLGNPSANGLYDLALGPADSKEVCS 65
P R ++ + FG+ S +ELK++SV I P + G P GL D G + C
Sbjct: 14 PLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEG-GRPKLGGLMDPRQGVIERTGRCQ 72
Query: 66 TCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLLLCQLR 125
TC + + C GH GHIEL V F +L+ L C C
Sbjct: 73 TCAGNMTECPGHFGHIELAKPV-----FHVGFLVKTMKVLRCVCFFC------------- 114
Query: 126 VLEVGALQAVYELERILNRFLEENPDPSASEIREELEQYTTEIVQNNLLGSQGAHVKNVC 185
++ L ++ +P +I + + + + + +G KN+C
Sbjct: 115 -----------------SKLLVDSNNPKIKDILAKSKGQPKKRLTHVYDLCKG---KNIC 154
Query: 186 ESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQKDSEPLGI 245
E + M+ K G + KE + + R+ + +E +
Sbjct: 155 EGGEE---------MDNKFGVEQPEGDEDLTKEKGHGGCGRYQPRIRRSGLELYAEWKHV 205
Query: 246 EEAQIGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDGMESRF-NPSVFFLDFLVV 304
E K+ L+P E + E F L GME R+ P + L V
Sbjct: 206 NEDSQEKKILLSPERVHEIFKRISDEECFVL----------GMEPRYARPEWMIVTVLPV 255
Query: 305 PPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPEEVATPTTDEEK 364
PP RP + Q Q +L + D+V I L Q +A
Sbjct: 256 PPLSVRPAVVM--QGSARNQD-DLTHKLADIVKINNQLRRNEQNGAAAHVIAEDV----- 307
Query: 365 DSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKL--MMDK----YPGIR 418
KL LQ HV + D+E+ L M K ++
Sbjct: 308 ---------------------KL------LQFHVATMVDNELPGLPRAMQKSGRPLKSLK 340
Query: 419 QILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQ 478
Q L+ KEG R ++MGKRVD++AR+VI PD ++ +++G+P A +T+ + VTP+N+
Sbjct: 341 QRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNID 400
Query: 479 ELRQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPATGAPKPQGTKI- 537
L++ V G + +PGA +I ++G R L PKP +
Sbjct: 401 RLQELVRRGNSQYPGAKYIIRDNGDRIDLRF-------------------HPKPSDLHLQ 441
Query: 538 ----VCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDE 593
V RH+ +GDI++ NRQPTLH+ S+ HR RILP RL+ + YNADFDGDE
Sbjct: 442 TGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS-TFRLNLSVTTPYNADFDGDE 500
Query: 594 MNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREHY 653
MN H PQS RAE LA + + P+ +P+ G++QD + + T R F R
Sbjct: 501 MNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEV 560
Query: 654 MELVYRGLTDKVGRVKLLSPSILKPFPLWTGKQVVSTLL---INIIP--EDHIPLNLSGK 708
M L+ L+ G+V P+ILKP PLWTGKQ+ S ++ IN I H SG
Sbjct: 561 MNLLMF-LSTWDGKVP--QPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGP 617
Query: 709 AKITGKAWVKETPRSVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEI 768
K PG +++V++ GEL+ G+L K G+SA LVH Y
Sbjct: 618 YKHIS-----------PG-------DTKVVVENGELIMGILCKKSLGTSAGSLVHISYLE 659
Query: 769 YGGETSGKVLTCLARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPQAVR 828
G + + + + + +L L G T+G+ D + AD K + I+ + Q V
Sbjct: 660 MGHDITRLFYSNIQTVINNWL-LIEGHTIGIGDSI----ADSKTYQDIQNTIKKAKQDV- 713
Query: 829 AALNLPEAASYDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQ 888
+ + E A +E+ + N + F+ +VN N+
Sbjct: 714 --IEVIEKAHNNEL-----------EPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSL 760
Query: 889 FPENSLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAG 948
N+ + MV SGAKGS +N Q+ ++GQ +EG+R P ++LP F ++ P +
Sbjct: 761 SEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESR 820
Query: 949 GFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVR 1008
GFV +L G+ P EFFFH M GREGL+DTAVKT+ +GY+QR +IK +E ++V+YD TVR
Sbjct: 821 GFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVR 880
Query: 1009 DSDGSVVQFLYGEDGLDIPKTQF-----LQP------KQFPFLASNYEVI---MKSQHLH 1054
+S VVQ YGEDGL +F L+P K+F F +N + ++ +
Sbjct: 881 NSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVK 940
Query: 1055 EVLSRADPKKALHHFRAIKKWQSKHPNTLLRRGAFLSYSQKIQEAVKALKL-----ESEN 1109
+VLS A + L ++++ + + R F + K+ L++ + +
Sbjct: 941 DVLSNAHIQNELE-----REFERMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFH 995
Query: 1110 RNGRSPGTQEMLRMWYELDEESRRKYQKKAAACPDPSLSVWRPDIYFASVSETFETKVDD 1169
N R P +++ + E S+ K D LS A + T +
Sbjct: 996 INPRLPSDLHPIKVVEGVKELSK----KLVIVNGDDPLS------RQAQENATLLFNIHL 1045
Query: 1170 YSQEWAAQTEKSYEKSELSLDRLRTLLQLKWQRSLCEPGEAVGLLAAQSIGEPSTQMTLN 1229
S + + + + S + D L ++ K+ +++ PGE VG LAAQS+GEP+TQMTLN
Sbjct: 1046 RSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLN 1105
Query: 1230 TFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVL-NTKKALKRVKSLKKQLTRV 1288
TFH+AG NVTLG+PRL+E++ + S KTP ++V +L + + +R K + +L
Sbjct: 1106 TFHYAGVSAKNVTLGVPRLKELINI-SKKPKTPSLTVFLLGQSARDAERAKDILCRLEHT 1164
Query: 1289 CLGEV 1293
L +V
Sbjct: 1165 TLRKV 1169
Score = 80.5 bits (197), Expect = 1e-14
Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
Query: 1561 RCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRV 1620
+ ++ E K +E +L T+G++L + +V D R SNDI I GIEA +
Sbjct: 1319 KIIITEDGEFKALQEWILETDGVSLMRVLSEKDV-DPVRTTSNDIVEIFTVLGIEAVRKA 1377
Query: 1621 IEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGI-RSNSSPLQQMTFETSFQ 1679
+E+E+ V + G V+ RHL+L+ D M G + R G+ R ++ PL + +FE +
Sbjct: 1378 LERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVD 1437
Query: 1680 FLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFEL 1715
L +A G D ++ S +++G++ GTG F+L
Sbjct: 1438 VLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDL 1473
>gi|39725938 polymerase (RNA) III (DNA directed) polypeptide A, 155kDa
[Homo sapiens]
Length = 1390
Score = 403 bits (1035), Expect = e-112
Identities = 296/927 (31%), Positives = 444/927 (47%), Gaps = 137/927 (14%)
Query: 391 WIRLQSHVNIVFDSEMDKLMMDKYP-----GIRQILEKKEGLFRKHMMGKRVDYAARSVI 445
W LQ + +SE+ + ++ P G Q L+ K+G FR ++ GKRVD++ R+VI
Sbjct: 310 WDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVI 369
Query: 446 CPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRT 505
PD + +E+ +P+ A LT+P+ V N+ LR+ V NGP VHPGA+ +
Sbjct: 370 SPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANFI-------- 421
Query: 506 ALSAVDMTQREAVAKQLLTPATGAPKPQGTK---IVCRHVKNGDILLLNRQPTLHRPSIQ 562
QR K+ L Q K IV RH+ +GD++L NRQP+LH+ SI
Sbjct: 422 -------QQRHTQMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIM 474
Query: 563 AHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPK 622
AH AR+ P + R + C YNADFDGDEMN H PQ+E +AEA VL T + P+
Sbjct: 475 AHLARVKPH-RTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPR 533
Query: 623 DGQPLAGLIQDHMVSGASMTTRGCFFTREHYMELVYRGLT--DKVGRVKLLSPSILKPFP 680
+G+PL IQD + +T + FF R +++ L D+ +V+L P+ILKP
Sbjct: 534 NGEPLIAAIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVT 593
Query: 681 LWTGKQVVSTLLINIIPEDHIPLNLSGKAKITGKAWVKETPRSVPGFNPDSMC--ESQVI 738
LWTGKQ+ S +L P D P+ + + K GK + + + +C +S V
Sbjct: 594 LWTGKQIFSVIL---RPSDDNPVRANLRTK--GKQYCGK---------GEDLCANDSYVT 639
Query: 739 IREGELLCGVLDKAHYGS-SAYGLVHCCYEIYGGETSGKVLTCLARLFTAYLQLYRGFTL 797
I+ EL+ G +DK GS S + + +G + ++ LARL YL RGF++
Sbjct: 640 IQNSELMSGSMDKGTLGSGSKNNIFYILLRDWGQNEAADAMSRLARLAPVYLS-NRGFSI 698
Query: 798 GVEDILVKPKADVKRQRIIEESTHCGPQAVRAALNLPEAASYDEVRGKWQDAHLGKDQRD 857
G+ D+ G ++A L A Y + + + GK Q+
Sbjct: 699 GIGDVTP------------------GQGLLKAKYELLN-AGYKKCDEYIEALNTGKLQQQ 739
Query: 858 -----FNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQSGAKGSTVNTMQI 912
++ +E++ + AC L NS M G+KGS +N Q+
Sbjct: 740 PGCTAEETLEALILKELSVIRDHAGSAC----LRELDKSNSPLTMALCGSKGSFINISQM 795
Query: 913 SCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIKPPEFFFHCMAGR 972
+GQ + G R P +SLP FE + P A GFV F +G+ P EFFFH MAGR
Sbjct: 796 IACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYSGLTPTEFFFHTMAGR 855
Query: 973 EGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFL 1032
EGLVDTAVKT+ +GY+QR ++K LE L QYDLTVR S G ++QF+YG DGLD +
Sbjct: 856 EGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLDPAAMEGK 915
Query: 1033 -QPKQFPFLASNYEVIMKSQHLHEVLSRADPKKALHHFRAIKKWQSKHPNTLLRRGAFLS 1091
+P +F + N + + ++P + + + K L + +FL
Sbjct: 916 DEPLEFKRVLDNIKAVFPCP--------SEPALSKNELILTTESIMKKSEFLCCQDSFLQ 967
Query: 1092 YSQKIQEAVKALKLESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAAACPDPSLSVWR 1151
+K + V ++ ++ G + R+ Y+LD + + +K C D
Sbjct: 968 EIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQVEKFLETCRD------- 1020
Query: 1152 PDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSLDRLRTLLQLKWQRSLCEPGEAV 1211
Y ++++ EPG AV
Sbjct: 1021 -----------------------------KYMRAQM------------------EPGSAV 1033
Query: 1212 GLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVLNT 1271
G L AQSIGEP TQMTL TFHFAG MN+TLG+PR++EI+ AS I TP+++ L+
Sbjct: 1034 GALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIIN-ASKAISTPIITAQ-LDK 1091
Query: 1272 KKALKRVKSLKKQLTRVCLGEVLQKID 1298
+ +K ++ + LGE+ + I+
Sbjct: 1092 DDDADYARLVKGRIEKTLLGEISEYIE 1118
Score = 73.6 bits (179), Expect = 2e-12
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Query: 1552 VIYATKGITRCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANT 1611
V+ ++R +++ + EK +L EG NL + V R SN+ + + T
Sbjct: 1200 VVQGIPEVSRAVIHIDEQSGKEKYKLL-VEGDNLRAVMATHGVKGTRTT-SNNTYEVEKT 1257
Query: 1612 YGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGI-RSNSSPLQ 1670
GIEAA I EI+ +G+++D RH+ L++D M ++G + RFG+ + S L
Sbjct: 1258 LGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLM 1317
Query: 1671 QMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFEL 1715
+FE + L A G D + S C+++G + GTGLF+L
Sbjct: 1318 LASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKL 1362
Score = 49.7 bits (117), Expect = 2e-05
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 10 RRLQGISFGMYSAEELKKLS-VKSITNPRYL-DSLGNPSANGLYDLALGPADSKEVCSTC 67
+++ I FGM S EE+++ + ++ ++ Y D+ P G+ D +G ++ C TC
Sbjct: 13 KKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNQHAPLLYGVLDHRMGTSEKDRPCETC 72
Query: 68 VQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNC 107
++ ++C GH G+I+L L ++ F + +L+ C C
Sbjct: 73 GKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTC 112
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 60.5 bits (145), Expect = 1e-08
Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 1382 ELGRSRGEQEGDE---EEEGHIVDAEAEE--GDADASDAKRKEKQEEEVDYESEEEEERE 1436
E G +GE+EG+E EEEG + E EE G+ + + E +EEE + E EEE E E
Sbjct: 852 EEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGE 911
Query: 1437 GEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEED 1473
GEE + E EE EG E +EE G G ED
Sbjct: 912 GEEEEGEGKGEEEGEEGEG-----EGEEEEGEGEGED 943
Score = 53.9 bits (128), Expect = 1e-06
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 1378 DNAGELGRSRGEQEGDE----EEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEE 1433
+ GE G GE+E E EEEG E EG+ + + + +E++E EV+ E E EE
Sbjct: 971 EGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEG-EGEGEEEEEGEVEGEVEGEE 1029
Query: 1434 -EREGEENDDEDMQEERNPHREG---ARKTQEQDEEVG 1467
E EGEE + E+ EER EG R +E++EE G
Sbjct: 1030 GEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEG 1067
Score = 53.9 bits (128), Expect = 1e-06
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 1382 ELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEE-EREGEEN 1440
E G GE+EG+ EEEG E EEG+ + E + EE + E EEEE E EGEE
Sbjct: 993 EEGEEEGEEEGEGEEEGEGEGEEEEEGEVEG------EVEGEEGEGEGEEEEGEEEGEER 1046
Query: 1441 DDEDMQEERNPHREGARKTQEQDEEVG 1467
+ E EE +RE + + + +E G
Sbjct: 1047 EKEGEGEENRRNREEEEEEEGKYQETG 1073
Score = 53.5 bits (127), Expect = 2e-06
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 1374 QRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESE-EE 1432
Q++ + + R++ +EG EEE G + E EEGD + + K E +EE E E E
Sbjct: 712 QKEREQGHQKERNQEMEEGGEEEHG---EGEEEEGDREEEEEKEGEGKEEGEGEEVEGER 768
Query: 1433 EEREGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEED 1473
E+ EGE +E +E EG + E++E G G E++
Sbjct: 769 EKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKE 809
Score = 53.1 bits (126), Expect = 2e-06
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 1382 ELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEE-EREGEE- 1439
E G +GE+EG+E E + E EEG+ + D + E +EEE ++E EEEE E EGEE
Sbjct: 915 EEGEGKGEEEGEEGEG----EGEEEEGEGEGEDGEG-EGEEEEGEWEGEEEEGEGEGEEE 969
Query: 1440 -----NDDEDMQEERNPHREGARKT-QEQDEEVGLGTEE 1472
+ E EE EG + +E+ EE G G EE
Sbjct: 970 GEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEE 1008
Score = 53.1 bits (126), Expect = 2e-06
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 1378 DNAGELGRSRGEQE-GDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEERE 1436
+ GE G GE+E G+ E E + E EEG+ + + + + + EEE + E EE E E
Sbjct: 922 EEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEG-EEGEGE 980
Query: 1437 GEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEED 1473
GEE + E EE EG + + ++E G G EE+
Sbjct: 981 GEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEE 1017
Score = 52.8 bits (125), Expect = 3e-06
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 13/87 (14%)
Query: 1384 GRSRGEQEGDEEEEGHIV-DAEAEEGDADASDAKRKEKQEEEVDYESEE-EEEREGEEN- 1440
G GE EG+EEEEG + + E EEG+ E +EEE + E EE E+E EGEEN
Sbjct: 1005 GEEEGEGEGEEEEEGEVEGEVEGEEGEG--------EGEEEEGEEEGEEREKEGEGEENR 1056
Query: 1441 -DDEDMQEERNPHRE-GARKTQEQDEE 1465
+ E+ +EE ++E G + + QD E
Sbjct: 1057 RNREEEEEEEGKYQETGEEENERQDGE 1083
Score = 52.4 bits (124), Expect = 4e-06
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 1382 ELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEND 1441
E G GE+EG+ E E + E EEG+ + + + +E+ EEE E EEE E EGEE +
Sbjct: 960 EEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEG--EGEEEGEGEGEEEE 1017
Query: 1442 DEDMQEERNPHREGARKTQEQDEEVGLGTEED 1473
+ +++ E +E+ EE G E++
Sbjct: 1018 EGEVEGEVEGEEGEGEGEEEEGEEEGEEREKE 1049
Score = 52.0 bits (123), Expect = 5e-06
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 1378 DNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEE-EERE 1436
+ GE GE EG+EE EG + E EEG+ + + E +EEE + + EEE EE E
Sbjct: 873 EGEGEGEEEEGEGEGEEEGEG---EGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGE 929
Query: 1437 GEENDDEDMQEERNPHREGARK----TQEQDEEVGLGTEE 1472
GE ++E E + EG + E++E G G EE
Sbjct: 930 GEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEE 969
Score = 50.8 bits (120), Expect = 1e-05
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 1385 RSRGEQEGDEEEEGHIVDA--EAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDD 1442
R EQE E E+GH + E EEG + + E +EEE D E EEE+E EG+E +
Sbjct: 705 RDGEEQEQKEREQGHQKERNQEMEEG----GEEEHGEGEEEEGDREEEEEKEGEGKEEGE 760
Query: 1443 EDMQEERNPHREGARKTQEQDEEVGLGTEE 1472
+ E EG RK +E+ + G EE
Sbjct: 761 GEEVEGEREKEEGERKKEERAGKEEKGEEE 790
Score = 50.8 bits (120), Expect = 1e-05
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 1381 GELGRSRGEQEGDEEE-EGHIVDAEAEE----GDADASDAKRKEKQEEEVDYESEEEEER 1435
GE+ +GE+E +EEE EG + E EE G+ + + K +E+ EE E EE E
Sbjct: 817 GEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEG 876
Query: 1436 EGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEED 1473
EGEE + E EE + + + EE G G E+
Sbjct: 877 EGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEE 914
Score = 50.8 bits (120), Expect = 1e-05
Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 1378 DNAGELGRSRGEQEGDE-------EEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESE 1430
D GE GE EG+E EEEG + E EEG+ + + + + + EEE + E E
Sbjct: 943 DGEGEGEEEEGEWEGEEEEGEGEGEEEG---EGEGEEGEGEGEEEEGEGEGEEE-EGEEE 998
Query: 1431 EEEEREGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEED 1473
EEE EGEE + + +EE EG E +E G G EE+
Sbjct: 999 GEEEGEGEEEGEGEGEEEEEGEVEG---EVEGEEGEGEGEEEE 1038
Score = 50.1 bits (118), Expect = 2e-05
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 1365 RNVNTRRATQRDLDNAGELGRSRGEQE-GDEEEEGHIVDAEAEEGDADASDAKRKEKQEE 1423
R ++ ++++ GE GE+E GD EEE EEG+ + + +R EK+E
Sbjct: 715 REQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGER-EKEEG 773
Query: 1424 EVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQ----------------EQDEEVG 1467
E E +E +GEE D+ EE G K + E++EE G
Sbjct: 774 ERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEG 833
Query: 1468 LGTEED 1473
G EE+
Sbjct: 834 EGEEEE 839
Score = 48.9 bits (115), Expect = 4e-05
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 16/138 (11%)
Query: 1352 ESIKKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQ---EGDEEEEGHIVDA-EAEE 1407
E ++ + K R R + + G+ G E+ G+E+EEG V+ E EE
Sbjct: 762 EEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEE 821
Query: 1408 GDADASDAKRK-EKQEEEVDYESEE----EEERE--GEENDDEDMQEERNPHREGARKTQ 1460
G + + + + E +EEE + E EE EEE E GEE +E EE EG + +
Sbjct: 822 GKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEE 881
Query: 1461 E-----QDEEVGLGTEED 1473
E ++E G G EE+
Sbjct: 882 EGEGEGEEEGEGEGEEEE 899
Score = 48.5 bits (114), Expect = 6e-05
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 20/116 (17%)
Query: 1378 DNAGELGRSRGEQEGDEEE-EGHIVDAEAEE------GDADASDAKRKEK--------QE 1422
+ GE E EG+EEE EG + E EE G+ + + + +E+ +E
Sbjct: 821 EGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEE 880
Query: 1423 EEVDYESEEEEEREGEENDDEDMQEE----RNPHREGARKTQEQDEE-VGLGTEED 1473
EE + E EEE E EGEE + E EE EG K +E+ EE G G EE+
Sbjct: 881 EEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEE 936
Score = 48.1 bits (113), Expect = 7e-05
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 1378 DNAGELGRSRGEQEGDEEE-EGHIVDAEAE--------EGDADASDAKRKEKQE---EEV 1425
+ GE GE EG+EEE EG D E E EG+ + + + +E+ E EE
Sbjct: 918 EGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEG 977
Query: 1426 DYESEEEE-EREGEENDDEDMQEERNPHREGARKTQEQDEE 1465
+ E EEEE E EGEE + E+ EE E E++EE
Sbjct: 978 EGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEE 1018
Score = 48.1 bits (113), Expect = 7e-05
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1378 DNAGELGRSRGEQEGDEEE-EGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEERE 1436
+ GE GE EG+EEE EG + E EE + + + + + E E + E E E E E
Sbjct: 967 EEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVE 1026
Query: 1437 GEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEED 1473
GEE + E +EE E K E +E EE+
Sbjct: 1027 GEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEE 1063
Score = 47.4 bits (111), Expect = 1e-04
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 1381 GELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEN 1440
GE+ GE EG+EEE + +EG+ + + R+E++EEE Y+ EEE E ++
Sbjct: 1023 GEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDG 1082
Query: 1441 DD-EDMQEERNPHREGARKTQEQDEEV---GLGTEEDPSLP 1477
++ + + + + + G KT ++ G G E+ +P
Sbjct: 1083 EEYKKVSKIKGSVKYGKHKTYQKKSVTNTQGNGKEQRSKMP 1123
Score = 41.2 bits (95), Expect = 0.009
Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 19/133 (14%)
Query: 1381 GELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDY-ESEEEEEREGEE 1439
G GR G E H D E E+G+ D + + E E + E EE ++R+GEE
Sbjct: 650 GPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEE 709
Query: 1440 NDDEDM----QEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGP 1495
+ ++ Q+ERN E + +EE G G EE+ R+ +E +G
Sbjct: 710 QEQKEREQGHQKERNQEME-----EGGEEEHGEGEEEEGD--------REEEEEKEGEGK 756
Query: 1496 EAME-RRVQAVRE 1507
E E V+ RE
Sbjct: 757 EEGEGEEVEGERE 769
Score = 38.9 bits (89), Expect = 0.044
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 1378 DNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREG 1437
D E G S E DEE E D E + K ++EE + EE+E++E
Sbjct: 656 DGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKER 715
Query: 1438 EENDDEDMQEE-----RNPHREGARK---TQEQDEEVGLGTEE 1472
E+ ++ +E H EG + +E++E+ G G EE
Sbjct: 716 EQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEE 758
Score = 33.1 bits (74), Expect = 2.4
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 1389 EQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEE 1448
E E EE+EG AE+ + + + E EE V +E+ E +D D E
Sbjct: 583 EVEIPEEKEG------AEDSKGNGIEEQEVEANEENVKVHGGRKEKTEILSDDLTDKAEV 636
Query: 1449 RNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVREI 1508
+ + ++ E G GT E+ S A Q + ++ +G MER + +E+
Sbjct: 637 SEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKEL 696
Score = 32.3 bits (72), Expect = 4.1
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 1374 QRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGD-ADASDAKRKEKQEEEVDYESEEE 1432
+R+ + GE R E+E EEEEG + EE + D + K+ K + V Y +
Sbjct: 1045 EREKEGEGEENRRNREEE--EEEEGKYQETGEEENERQDGEEYKKVSKIKGSVKYGKHKT 1102
Query: 1433 EEREGEENDDEDMQEERN 1450
+++ N + +E+R+
Sbjct: 1103 YQKKSVTNTQGNGKEQRS 1120
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 58.5 bits (140), Expect = 5e-08
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 1383 LGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDD 1442
+ S E+E +EEEE + E EE D + + +E EEE + E E EEE E EE +
Sbjct: 883 INSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGEL 942
Query: 1443 EDMQEERNPHREGARKTQEQDE------EVGLGTEEDPSLPALLTQPRKPTHSQEPQGPE 1496
E+ +EE + E + E E EV G P+LP L P P Q PE
Sbjct: 943 EEEEEEEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPEPE 1002
Score = 32.7 bits (73), Expect = 3.1
Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Query: 1407 EGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEEV 1466
EG E+ ++ S +EEE E EE ++E+ +EE + + ++++E
Sbjct: 863 EGTPGGGGPPALEEDLTVININSSDEEEEE-EEEEEEEEEEEEEEEEDFEEEEEDEEEYF 921
Query: 1467 GLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVREI 1508
EE+ + +E + E E ++ V ++
Sbjct: 922 EEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDL 963
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapiens]
Length = 123
Score = 56.2 bits (134), Expect = 3e-07
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 1355 KKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEA---EEGDAD 1411
KKK K T+ + + G+ R E+ ++E++ + E +E +
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEK 60
Query: 1412 ASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEE 1465
KRK+K+EEE E EEEEE E EE ++E+ +E R ++ R+ +E++EE
Sbjct: 61 KRKRKRKKKKEEE---EREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEE 111
Score = 43.5 bits (101), Expect = 0.002
Identities = 24/117 (20%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 1385 RSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDED 1444
+ + ++E +E EE + E EE + + ++++++E+E +++E E+R+ +E +++
Sbjct: 3 KKKKKKETEETEETEETEEE-EEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKK 61
Query: 1445 MQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERR 1501
+ +R +E + +E++EE EE+ + +K +E + + RR
Sbjct: 62 RKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRR 118
Score = 33.5 bits (75), Expect = 1.8
Identities = 18/85 (21%), Positives = 39/85 (45%)
Query: 1352 ESIKKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDAD 1411
E K+K K + + + + + + E+E +EEEE + E EE +
Sbjct: 35 EKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEG 94
Query: 1412 ASDAKRKEKQEEEVDYESEEEEERE 1436
K+K+++ +E + E +++ R+
Sbjct: 95 RRRKKKKKRRRKEEEEEKKKKRRRK 119
Score = 32.0 bits (71), Expect = 5.3
Identities = 16/107 (14%), Positives = 49/107 (45%)
Query: 1352 ESIKKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDAD 1411
E +++ K + + +++ + R E+E +E++ + EE + +
Sbjct: 17 EETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEERE 76
Query: 1412 ASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARK 1458
+ + +E++EEE E ++++ +E+ ++++ R+ +K
Sbjct: 77 EEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 53.1 bits (126), Expect = 2e-06
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 1362 SAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDA----------D 1411
S V ++ A +D GE + R +G +A + G+
Sbjct: 370 SRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPS 429
Query: 1412 ASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEE 1465
AS A+ ++ +EE D E EEEEE E EE D + +E+ +EG +E+DEE
Sbjct: 430 ASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEE 483
Score = 42.0 bits (97), Expect = 0.005
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 1389 EQEGDEEEEGHIVDAEAEEGDA-DASDAKRKEKQEEEVDYESEEEEEREGEENDDEDM-- 1445
++E DEEEE + E E D+ + D ++ ++ +E+ + E EEEE G++ D M
Sbjct: 440 DEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSS 499
Query: 1446 ---QEERN--PHREGARKTQEQDEEVGLGT----EEDPSLPALL------TQPRKPTHSQ 1490
E+N P ++ +R + EQ + + + E+P P+ + QP + T +
Sbjct: 500 LQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAPSSIDAESNGEQPEELTLEE 559
Query: 1491 EPQGPEAMERRVQAV 1505
E + E ++A+
Sbjct: 560 ESPVSQLFELEIEAL 574
Score = 40.0 bits (92), Expect = 0.020
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Query: 1403 AEAEEGDADASDAKRKEKQEEEVDYESEEEEE------REGEENDDEDMQEE 1448
AE ++ D + SD + +E++EEE + ++ EEE +EG+E+D+E+ +EE
Sbjct: 433 AETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEE 484
>gi|215422388 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 53.1 bits (126), Expect = 2e-06
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 1362 SAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDA----------D 1411
S V ++ A +D GE + R +G +A + G+
Sbjct: 370 SRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPS 429
Query: 1412 ASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEE 1465
AS A+ ++ +EE D E EEEEE E EE D + +E+ +EG +E+DEE
Sbjct: 430 ASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEE 483
Score = 42.0 bits (97), Expect = 0.005
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 1389 EQEGDEEEEGHIVDAEAEEGDA-DASDAKRKEKQEEEVDYESEEEEEREGEENDDEDM-- 1445
++E DEEEE + E E D+ + D ++ ++ +E+ + E EEEE G++ D M
Sbjct: 440 DEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSS 499
Query: 1446 ---QEERN--PHREGARKTQEQDEEVGLGT----EEDPSLPALL------TQPRKPTHSQ 1490
E+N P ++ +R + EQ + + + E+P P+ + QP + T +
Sbjct: 500 LQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAPSSIDAESNGEQPEELTLEE 559
Query: 1491 EPQGPEAMERRVQAV 1505
E + E ++A+
Sbjct: 560 ESPVSQLFELEIEAL 574
Score = 40.0 bits (92), Expect = 0.020
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Query: 1403 AEAEEGDADASDAKRKEKQEEEVDYESEEEEE------REGEENDDEDMQEE 1448
AE ++ D + SD + +E++EEE + ++ EEE +EG+E+D+E+ +EE
Sbjct: 433 AETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEE 484
>gi|215422366 death-domain associated protein isoform b [Homo sapiens]
Length = 752
Score = 53.1 bits (126), Expect = 2e-06
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 1362 SAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDA----------D 1411
S V ++ A +D GE + R +G +A + G+
Sbjct: 382 SRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPS 441
Query: 1412 ASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEE 1465
AS A+ ++ +EE D E EEEEE E EE D + +E+ +EG +E+DEE
Sbjct: 442 ASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEE 495
Score = 42.0 bits (97), Expect = 0.005
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 1389 EQEGDEEEEGHIVDAEAEEGDA-DASDAKRKEKQEEEVDYESEEEEEREGEENDDEDM-- 1445
++E DEEEE + E E D+ + D ++ ++ +E+ + E EEEE G++ D M
Sbjct: 452 DEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSS 511
Query: 1446 ---QEERN--PHREGARKTQEQDEEVGLGT----EEDPSLPALL------TQPRKPTHSQ 1490
E+N P ++ +R + EQ + + + E+P P+ + QP + T +
Sbjct: 512 LQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAPSSIDAESNGEQPEELTLEE 571
Query: 1491 EPQGPEAMERRVQAV 1505
E + E ++A+
Sbjct: 572 ESPVSQLFELEIEAL 586
Score = 40.0 bits (92), Expect = 0.020
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Query: 1403 AEAEEGDADASDAKRKEKQEEEVDYESEEEEE------REGEENDDEDMQEE 1448
AE ++ D + SD + +E++EEE + ++ EEE +EG+E+D+E+ +EE
Sbjct: 445 AETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEE 496
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 52.8 bits (125), Expect = 3e-06
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 1368 NTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDY 1427
++ R T ++ E G E+E +EEEE + E + + + +E++EEE
Sbjct: 259 DSERKTSSAESSSAESGSGSEEEEEEEEEE----EEEGSTSEESEEEEEEEEEEEEETGS 314
Query: 1428 ESEEEEEREGEENDDEDMQEERNPHREG-------------ARKTQEQDEEVGLGTEEDP 1474
SEE E+ EE +E+M E+ E + +++E +EEVG GT +
Sbjct: 315 NSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSS 374
Query: 1475 SL 1476
+L
Sbjct: 375 AL 376
Score = 45.8 bits (107), Expect = 4e-04
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 16/167 (9%)
Query: 1382 ELGRSRGEQEGDEEEEGHIV-------DAEAEEGDADASDAKRKEKQEEEVDYESEEEEE 1434
ELG R + ++ EE ++ D+E + A++S A+ EEE + E EEEEE
Sbjct: 232 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 291
Query: 1435 ----REGEENDDEDMQEER----NPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKP 1486
E EE ++E+ +EE N + +E EE EE + LL P
Sbjct: 292 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESR 351
Query: 1487 THSQEPQGPEAMERRVQAVREIHPFID-DYQYDTEESLWCQVTVKLP 1532
+ EA E + + + DY D+ L ++ +LP
Sbjct: 352 FDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSPALLPIELKQELP 398
Score = 33.1 bits (74), Expect = 2.4
Identities = 44/204 (21%), Positives = 78/204 (38%), Gaps = 26/204 (12%)
Query: 1355 KKKNNKASAFRNVNTR-RATQRDLDNAGELG--------------RSRGEQEGDEEEEGH 1399
K++ KA R N+ R ++RD GEL R ++ EE++
Sbjct: 24 KEQEEKAEIKRLKNSDDRDSKRDSLEEGELRDHCMEITIRNSPYRREDSMEDRGEEDDSL 83
Query: 1400 IVDAEAEEGDADASDAKRKEKQEEE-----VDYESEEEEEREGEENDDEDMQEERNPHRE 1454
+ + + ++ EK++E+ V E +R EE D + ER RE
Sbjct: 84 AIKPPQQMSRKEKVHHRKDEKRKEKWKHARVKEREHERRKRHREEQDKARREWERQKRRE 143
Query: 1455 GARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRV--QAVREI---- 1508
AR+ ++ + E + + +K Q+ + A ERR +A RE+
Sbjct: 144 MAREHSRRERDRLEQLERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHH 203
Query: 1509 HPFIDDYQYDTEESLWCQVTVKLP 1532
+DY + S W + + P
Sbjct: 204 RTMREDYSDKVKASHWSRSPPRPP 227
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 52.8 bits (125), Expect = 3e-06
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 1368 NTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDY 1427
++ R T ++ E G E+E +EEEE + E + + + +E++EEE
Sbjct: 269 DSERKTSSAESSSAESGSGSEEEEEEEEEE----EEEGSTSEESEEEEEEEEEEEEETGS 324
Query: 1428 ESEEEEEREGEENDDEDMQEERNPHREG-------------ARKTQEQDEEVGLGTEEDP 1474
SEE E+ EE +E+M E+ E + +++E +EEVG GT +
Sbjct: 325 NSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSS 384
Query: 1475 SL 1476
+L
Sbjct: 385 AL 386
Score = 45.8 bits (107), Expect = 4e-04
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 16/167 (9%)
Query: 1382 ELGRSRGEQEGDEEEEGHIV-------DAEAEEGDADASDAKRKEKQEEEVDYESEEEEE 1434
ELG R + ++ EE ++ D+E + A++S A+ EEE + E EEEEE
Sbjct: 242 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 301
Query: 1435 ----REGEENDDEDMQEER----NPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKP 1486
E EE ++E+ +EE N + +E EE EE + LL P
Sbjct: 302 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESR 361
Query: 1487 THSQEPQGPEAMERRVQAVREIHPFID-DYQYDTEESLWCQVTVKLP 1532
+ EA E + + + DY D+ L ++ +LP
Sbjct: 362 FDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSPALLPIELKQELP 408
>gi|115529449 upstream binding transcription factor, RNA polymerase I
isoform b [Homo sapiens]
Length = 727
Score = 52.8 bits (125), Expect = 3e-06
Identities = 72/395 (18%), Positives = 141/395 (35%), Gaps = 81/395 (20%)
Query: 1093 SQKIQEAVKALKLESENRN----------GRSPGTQEMLRMWYELDEESRRKYQKKAAAC 1142
S+K + V A+ + SE + S T+ + RMW +L E+ + KY+ + AA
Sbjct: 367 SEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAL 426
Query: 1143 ---------------------PDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKS 1181
P + +W+ + + DY + K+
Sbjct: 427 KAQSERKPGGEREERGKLPESPKRAEEIWQQSV------------IGDYLARFKNDRVKA 474
Query: 1182 YEKSELSLDRLRTLLQLKWQRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNV 1241
+ E++ + + +L W + E + ++ P+ + F G +
Sbjct: 475 LKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPP 534
Query: 1242 TLGIPRLREILMVASANIKTPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQE 1301
G + + L+ P+ V + + +S K+ ++
Sbjct: 535 MNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLA------------ 582
Query: 1302 SFCMEEKQNKFQVYQLRFQFLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKNNKA 1361
EE+Q +++V+ + K L P+D + E I K
Sbjct: 583 ----EEQQKQYKVHLDLWV----------KSLSPQDRAAYKEY---------ISNKRKSM 619
Query: 1362 SAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQ 1421
+ R N + +++ L + E E E DE+E+ D E + D D+ +
Sbjct: 620 TKLRGPNPK-SSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSE 678
Query: 1422 EEEVDYESEEEEEREGEENDDEDMQEERNPHREGA 1456
+E D +E EE + +E+DDED E+ + EG+
Sbjct: 679 DESED--GDENEEDDEDEDDDEDDDEDEDNESEGS 711
Score = 34.3 bits (77), Expect = 1.1
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 1417 RKEKQEEEVDYESEEEEEREGEENDDE--DMQEERNPHREGARKTQEQDEEVGLGTEED 1473
+ + + EE D E E++E+ + EE DDE D E+ E + + + +D + +ED
Sbjct: 635 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED 693
>gi|115529451 upstream binding transcription factor, RNA polymerase I
isoform b [Homo sapiens]
Length = 727
Score = 52.8 bits (125), Expect = 3e-06
Identities = 72/395 (18%), Positives = 141/395 (35%), Gaps = 81/395 (20%)
Query: 1093 SQKIQEAVKALKLESENRN----------GRSPGTQEMLRMWYELDEESRRKYQKKAAAC 1142
S+K + V A+ + SE + S T+ + RMW +L E+ + KY+ + AA
Sbjct: 367 SEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAL 426
Query: 1143 ---------------------PDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKS 1181
P + +W+ + + DY + K+
Sbjct: 427 KAQSERKPGGEREERGKLPESPKRAEEIWQQSV------------IGDYLARFKNDRVKA 474
Query: 1182 YEKSELSLDRLRTLLQLKWQRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNV 1241
+ E++ + + +L W + E + ++ P+ + F G +
Sbjct: 475 LKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPP 534
Query: 1242 TLGIPRLREILMVASANIKTPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQE 1301
G + + L+ P+ V + + +S K+ ++
Sbjct: 535 MNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLA------------ 582
Query: 1302 SFCMEEKQNKFQVYQLRFQFLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKNNKA 1361
EE+Q +++V+ + K L P+D + E I K
Sbjct: 583 ----EEQQKQYKVHLDLWV----------KSLSPQDRAAYKEY---------ISNKRKSM 619
Query: 1362 SAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQ 1421
+ R N + +++ L + E E E DE+E+ D E + D D+ +
Sbjct: 620 TKLRGPNPK-SSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSE 678
Query: 1422 EEEVDYESEEEEEREGEENDDEDMQEERNPHREGA 1456
+E D +E EE + +E+DDED E+ + EG+
Sbjct: 679 DESED--GDENEEDDEDEDDDEDDDEDEDNESEGS 711
Score = 34.3 bits (77), Expect = 1.1
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 1417 RKEKQEEEVDYESEEEEEREGEENDDE--DMQEERNPHREGARKTQEQDEEVGLGTEED 1473
+ + + EE D E E++E+ + EE DDE D E+ E + + + +D + +ED
Sbjct: 635 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED 693
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 52.8 bits (125), Expect = 3e-06
Identities = 72/395 (18%), Positives = 141/395 (35%), Gaps = 81/395 (20%)
Query: 1093 SQKIQEAVKALKLESENRN----------GRSPGTQEMLRMWYELDEESRRKYQKKAAAC 1142
S+K + V A+ + SE + S T+ + RMW +L E+ + KY+ + AA
Sbjct: 404 SEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAL 463
Query: 1143 ---------------------PDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKS 1181
P + +W+ + + DY + K+
Sbjct: 464 KAQSERKPGGEREERGKLPESPKRAEEIWQQSV------------IGDYLARFKNDRVKA 511
Query: 1182 YEKSELSLDRLRTLLQLKWQRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNV 1241
+ E++ + + +L W + E + ++ P+ + F G +
Sbjct: 512 LKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPP 571
Query: 1242 TLGIPRLREILMVASANIKTPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQE 1301
G + + L+ P+ V + + +S K+ ++
Sbjct: 572 MNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLA------------ 619
Query: 1302 SFCMEEKQNKFQVYQLRFQFLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKNNKA 1361
EE+Q +++V+ + K L P+D + E I K
Sbjct: 620 ----EEQQKQYKVHLDLWV----------KSLSPQDRAAYKEY---------ISNKRKSM 656
Query: 1362 SAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQ 1421
+ R N + +++ L + E E E DE+E+ D E + D D+ +
Sbjct: 657 TKLRGPNPK-SSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSE 715
Query: 1422 EEEVDYESEEEEEREGEENDDEDMQEERNPHREGA 1456
+E D +E EE + +E+DDED E+ + EG+
Sbjct: 716 DESED--GDENEEDDEDEDDDEDDDEDEDNESEGS 748
Score = 34.3 bits (77), Expect = 1.1
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 1417 RKEKQEEEVDYESEEEEEREGEENDDE--DMQEERNPHREGARKTQEQDEEVGLGTEED 1473
+ + + EE D E E++E+ + EE DDE D E+ E + + + +D + +ED
Sbjct: 672 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED 730
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform 9
[Homo sapiens]
Length = 771
Score = 52.8 bits (125), Expect = 3e-06
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 1368 NTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDY 1427
++ R T ++ E G E+E +EEEE + E + + + +E++EEE
Sbjct: 260 DSERKTSSAESSSAESGSGSEEEEEEEEEE----EEEGSTSEESEEEEEEEEEEEEETGS 315
Query: 1428 ESEEEEEREGEENDDEDMQEERNPHREG-------------ARKTQEQDEEVGLGTEEDP 1474
SEE E+ EE +E+M E+ E + +++E +EEVG GT +
Sbjct: 316 NSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSS 375
Query: 1475 SL 1476
+L
Sbjct: 376 AL 377
Score = 45.1 bits (105), Expect = 6e-04
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 1382 ELGRSRGEQEGDEEEEGHIV-------DAEAEEGDADASDAKRKEKQEEEVDYESEEEEE 1434
ELG R + ++ EE ++ D+E + A++S A+ EEE + E EEEEE
Sbjct: 233 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 292
Query: 1435 REGEENDDEDMQEERNPHREGARKTQEQDEE 1465
E +E+ +EE E ++E E+
Sbjct: 293 GSTSEESEEEEEEEEEEEEETGSNSEEASEQ 323
Score = 38.1 bits (87), Expect = 0.074
Identities = 52/205 (25%), Positives = 80/205 (39%), Gaps = 27/205 (13%)
Query: 1355 KKKNNKASAFRNVNTR-RATQRDLDNAGELG---------RSRGEQEGDEEEEGHIVDAE 1404
K++ KA R N+ R ++RD GEL S +E E+ G D+
Sbjct: 24 KEQEEKAEIKRLKNSDDRDSKRDSLEEGELRDHCMEITIRNSPYRREDSMEDRGEEDDSL 83
Query: 1405 AEEGDADAS---------DAKRKEKQEEEVDYESEEEE--EREGEENDDEDMQEERNPHR 1453
A + S D KRKEK+ V + E E +R EE D + ER R
Sbjct: 84 AIKPPQQMSRKEKVHHRKDEKRKEKKHARVKEKEREHERRKRHREEQDKARREWERQKRR 143
Query: 1454 EGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRV--QAVREI--- 1508
E AR+ ++ + E + + +K Q+ + A ERR +A RE+
Sbjct: 144 EMAREHSRRERDRLEQLERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAH 203
Query: 1509 -HPFIDDYQYDTEESLWCQVTVKLP 1532
+DY + S W + + P
Sbjct: 204 HRTMREDYSDKVKASHWSRSPPRPP 228
Score = 33.9 bits (76), Expect = 1.4
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 27/138 (19%)
Query: 1355 KKKNNKASAFRNVNTRRATQR----DLDNAGELGRS--RGEQEGDEEEEGH--IVDAEAE 1406
+++ + A R V+ T R D A RS R +E E +G + + + E
Sbjct: 188 EERRKEREARREVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKME 247
Query: 1407 EGDA-----DASDAKRKEKQEEEVDYES----EEEEEREGEENDDEDMQEERNPHREGAR 1457
E D D SD++RK E ES EEEEE E EE ++ EE
Sbjct: 248 ERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE--------- 298
Query: 1458 KTQEQDEEVGLGTEEDPS 1475
++E++EE EE S
Sbjct: 299 -SEEEEEEEEEEEEETGS 315
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform 8
[Homo sapiens]
Length = 780
Score = 52.8 bits (125), Expect = 3e-06
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 1368 NTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDY 1427
++ R T ++ E G E+E +EEEE + E + + + +E++EEE
Sbjct: 269 DSERKTSSAESSSAESGSGSEEEEEEEEEE----EEEGSTSEESEEEEEEEEEEEEETGS 324
Query: 1428 ESEEEEEREGEENDDEDMQEERNPHREG-------------ARKTQEQDEEVGLGTEEDP 1474
SEE E+ EE +E+M E+ E + +++E +EEVG GT +
Sbjct: 325 NSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSS 384
Query: 1475 SL 1476
+L
Sbjct: 385 AL 386
Score = 45.1 bits (105), Expect = 6e-04
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 1382 ELGRSRGEQEGDEEEEGHIV-------DAEAEEGDADASDAKRKEKQEEEVDYESEEEEE 1434
ELG R + ++ EE ++ D+E + A++S A+ EEE + E EEEEE
Sbjct: 242 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 301
Query: 1435 REGEENDDEDMQEERNPHREGARKTQEQDEE 1465
E +E+ +EE E ++E E+
Sbjct: 302 GSTSEESEEEEEEEEEEEEETGSNSEEASEQ 332
Score = 33.9 bits (76), Expect = 1.4
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 27/138 (19%)
Query: 1355 KKKNNKASAFRNVNTRRATQR----DLDNAGELGRS--RGEQEGDEEEEGH--IVDAEAE 1406
+++ + A R V+ T R D A RS R +E E +G + + + E
Sbjct: 197 EERRKEREARREVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKME 256
Query: 1407 EGDA-----DASDAKRKEKQEEEVDYES----EEEEEREGEENDDEDMQEERNPHREGAR 1457
E D D SD++RK E ES EEEEE E EE ++ EE
Sbjct: 257 ERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE--------- 307
Query: 1458 KTQEQDEEVGLGTEEDPS 1475
++E++EE EE S
Sbjct: 308 -SEEEEEEEEEEEEETGS 324
Score = 33.1 bits (74), Expect = 2.4
Identities = 56/214 (26%), Positives = 83/214 (38%), Gaps = 36/214 (16%)
Query: 1355 KKKNNKASAFRNVNTR-RATQRDLDNAGELG---------RSRGEQEGDEEEEGHIVDAE 1404
K++ KA R N+ R ++RD GEL S +E E+ G D+
Sbjct: 24 KEQEEKAEIKRLKNSDDRDSKRDSLEEGELRDHCMEITIRNSPYRREDSMEDRGEEDDSL 83
Query: 1405 AEEGDADAS---------DAKRKEKQEEEVDYESEEEE--EREGEENDDEDMQEERNPHR 1453
A + S D KRKEK+ V + E E +R EE D + ER R
Sbjct: 84 AIKPPQQMSRKEKVHHRKDEKRKEKKHARVKEKEREHERRKRHREEQDKARREWERQKRR 143
Query: 1454 EGAR---KTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPE------AMERRV-- 1502
E AR + + ++ V L + L + RK Q+ Q + A ERR
Sbjct: 144 EMAREHSRRERGNDGVCLFRDRLEQLERKRERERKMREQQKEQREQKERERRAEERRKER 203
Query: 1503 QAVREI----HPFIDDYQYDTEESLWCQVTVKLP 1532
+A RE+ +DY + S W + + P
Sbjct: 204 EARREVSAHHRTMREDYSDKVKASHWSRSPPRPP 237
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform 5
[Homo sapiens]
Length = 748
Score = 52.8 bits (125), Expect = 3e-06
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 1368 NTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDY 1427
++ R T ++ E G E+E +EEEE + E + + + +E++EEE
Sbjct: 237 DSERKTSSAESSSAESGSGSEEEEEEEEEE----EEEGSTSEESEEEEEEEEEEEEETGS 292
Query: 1428 ESEEEEEREGEENDDEDMQEERNPHREG-------------ARKTQEQDEEVGLGTEEDP 1474
SEE E+ EE +E+M E+ E + +++E +EEVG GT +
Sbjct: 293 NSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSS 352
Query: 1475 SL 1476
+L
Sbjct: 353 AL 354
Score = 45.1 bits (105), Expect = 6e-04
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 1382 ELGRSRGEQEGDEEEEGHIV-------DAEAEEGDADASDAKRKEKQEEEVDYESEEEEE 1434
ELG R + ++ EE ++ D+E + A++S A+ EEE + E EEEEE
Sbjct: 210 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 269
Query: 1435 REGEENDDEDMQEERNPHREGARKTQEQDEE 1465
E +E+ +EE E ++E E+
Sbjct: 270 GSTSEESEEEEEEEEEEEEETGSNSEEASEQ 300
Score = 33.9 bits (76), Expect = 1.4
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 27/138 (19%)
Query: 1355 KKKNNKASAFRNVNTRRATQR----DLDNAGELGRS--RGEQEGDEEEEGH--IVDAEAE 1406
+++ + A R V+ T R D A RS R +E E +G + + + E
Sbjct: 165 EERRKEREARREVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKME 224
Query: 1407 EGDA-----DASDAKRKEKQEEEVDYES----EEEEEREGEENDDEDMQEERNPHREGAR 1457
E D D SD++RK E ES EEEEE E EE ++ EE
Sbjct: 225 ERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE--------- 275
Query: 1458 KTQEQDEEVGLGTEEDPS 1475
++E++EE EE S
Sbjct: 276 -SEEEEEEEEEEEEETGS 292
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform 4
[Homo sapiens]
Length = 737
Score = 52.8 bits (125), Expect = 3e-06
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 1368 NTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDY 1427
++ R T ++ E G E+E +EEEE + E + + + +E++EEE
Sbjct: 226 DSERKTSSAESSSAESGSGSEEEEEEEEEE----EEEGSTSEESEEEEEEEEEEEEETGS 281
Query: 1428 ESEEEEEREGEENDDEDMQEERNPHREG-------------ARKTQEQDEEVGLGTEEDP 1474
SEE E+ EE +E+M E+ E + +++E +EEVG GT +
Sbjct: 282 NSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSS 341
Query: 1475 SL 1476
+L
Sbjct: 342 AL 343
Score = 45.1 bits (105), Expect = 6e-04
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 1382 ELGRSRGEQEGDEEEEGHIV-------DAEAEEGDADASDAKRKEKQEEEVDYESEEEEE 1434
ELG R + ++ EE ++ D+E + A++S A+ EEE + E EEEEE
Sbjct: 199 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 258
Query: 1435 REGEENDDEDMQEERNPHREGARKTQEQDEE 1465
E +E+ +EE E ++E E+
Sbjct: 259 GSTSEESEEEEEEEEEEEEETGSNSEEASEQ 289
Score = 38.1 bits (87), Expect = 0.074
Identities = 48/188 (25%), Positives = 73/188 (38%), Gaps = 26/188 (13%)
Query: 1371 RATQRDLDNAGELGRSRGE---------QEGDEEEEGHIVDAEAEEGDADAS-------- 1413
R ++RD GEL R E +E E+ G D+ A + S
Sbjct: 7 RDSKRDSLEEGELRDHRMEITIRNSPYRREDSMEDRGEEDDSLAIKPPQQMSRKEKVHHR 66
Query: 1414 -DAKRKEKQEEEVDYESEEEE--EREGEENDDEDMQEERNPHREGARKTQEQDEEVGLGT 1470
D KRKEK+ V + E E +R EE D + ER RE AR+ ++ +
Sbjct: 67 KDEKRKEKKHARVKEKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQL 126
Query: 1471 EEDPSLPALLTQPRKPTHSQEPQGPEAMERRV--QAVREI----HPFIDDYQYDTEESLW 1524
E + + +K Q+ + A ERR +A RE+ +DY + S W
Sbjct: 127 ERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDKVKASHW 186
Query: 1525 CQVTVKLP 1532
+ + P
Sbjct: 187 SRSPPRPP 194
Score = 33.9 bits (76), Expect = 1.4
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 27/138 (19%)
Query: 1355 KKKNNKASAFRNVNTRRATQR----DLDNAGELGRS--RGEQEGDEEEEGH--IVDAEAE 1406
+++ + A R V+ T R D A RS R +E E +G + + + E
Sbjct: 154 EERRKEREARREVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKME 213
Query: 1407 EGDA-----DASDAKRKEKQEEEVDYES----EEEEEREGEENDDEDMQEERNPHREGAR 1457
E D D SD++RK E ES EEEEE E EE ++ EE
Sbjct: 214 ERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE--------- 264
Query: 1458 KTQEQDEEVGLGTEEDPS 1475
++E++EE EE S
Sbjct: 265 -SEEEEEEEEEEEEETGS 281
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform 3
[Homo sapiens]
Length = 526
Score = 52.8 bits (125), Expect = 3e-06
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 1368 NTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDY 1427
++ R T ++ E G E+E +EEEE + E + + + +E++EEE
Sbjct: 15 DSERKTSSAESSSAESGSGSEEEEEEEEEE----EEEGSTSEESEEEEEEEEEEEEETGS 70
Query: 1428 ESEEEEEREGEENDDEDMQEERNPHREG-------------ARKTQEQDEEVGLGTEEDP 1474
SEE E+ EE +E+M E+ E + +++E +EEVG GT +
Sbjct: 71 NSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSS 130
Query: 1475 SL 1476
+L
Sbjct: 131 AL 132
Score = 43.9 bits (102), Expect = 0.001
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 1400 IVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKT 1459
I D+E + A++S A+ EEE + E EEEEE E +E+ +EE E +
Sbjct: 13 ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 72
Query: 1460 QEQDEE 1465
+E E+
Sbjct: 73 EEASEQ 78
Score = 33.1 bits (74), Expect = 2.4
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 1411 DASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEE 1465
D SD++RK E ES E EE ++E+ +EE E + + +E++EE
Sbjct: 12 DISDSERKTSSAESSSAESGSGSE---EEEEEEEEEEEEGSTSEESEEEEEEEEE 63
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform 2
[Homo sapiens]
Length = 782
Score = 52.8 bits (125), Expect = 3e-06
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 1368 NTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDY 1427
++ R T ++ E G E+E +EEEE + E + + + +E++EEE
Sbjct: 271 DSERKTSSAESSSAESGSGSEEEEEEEEEE----EEEGSTSEESEEEEEEEEEEEEETGS 326
Query: 1428 ESEEEEEREGEENDDEDMQEERNPHREG-------------ARKTQEQDEEVGLGTEEDP 1474
SEE E+ EE +E+M E+ E + +++E +EEVG GT +
Sbjct: 327 NSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSS 386
Query: 1475 SL 1476
+L
Sbjct: 387 AL 388
Score = 45.1 bits (105), Expect = 6e-04
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 1382 ELGRSRGEQEGDEEEEGHIV-------DAEAEEGDADASDAKRKEKQEEEVDYESEEEEE 1434
ELG R + ++ EE ++ D+E + A++S A+ EEE + E EEEEE
Sbjct: 244 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 303
Query: 1435 REGEENDDEDMQEERNPHREGARKTQEQDEE 1465
E +E+ +EE E ++E E+
Sbjct: 304 GSTSEESEEEEEEEEEEEEETGSNSEEASEQ 334
Score = 33.9 bits (76), Expect = 1.4
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 27/138 (19%)
Query: 1355 KKKNNKASAFRNVNTRRATQR----DLDNAGELGRS--RGEQEGDEEEEGH--IVDAEAE 1406
+++ + A R V+ T R D A RS R +E E +G + + + E
Sbjct: 199 EERRKEREARREVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKME 258
Query: 1407 EGDA-----DASDAKRKEKQEEEVDYES----EEEEEREGEENDDEDMQEERNPHREGAR 1457
E D D SD++RK E ES EEEEE E EE ++ EE
Sbjct: 259 ERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE--------- 309
Query: 1458 KTQEQDEEVGLGTEEDPS 1475
++E++EE EE S
Sbjct: 310 -SEEEEEEEEEEEEETGS 326
Score = 32.7 bits (73), Expect = 3.1
Identities = 54/216 (25%), Positives = 80/216 (37%), Gaps = 38/216 (17%)
Query: 1355 KKKNNKASAFRNVNTR-RATQRDLDNAGELGRSRGE---------QEGDEEEEGHIVDAE 1404
K++ KA R N+ R ++RD GEL R E +E E+ G D+
Sbjct: 24 KEQEEKAEIKRLKNSDDRDSKRDSLEEGELRDHRMEITIRNSPYRREDSMEDRGEEDDSL 83
Query: 1405 AEEGDADAS---------DAKRKEKQEEEVD----------YESEEEEE---REGEENDD 1442
A + S D KRKEK+ E E E E R EE D
Sbjct: 84 AIKPPQQMSRKEKVHHRKDEKRKEKRRHRSHSAEGGKHARVKEKEREHERRKRHREEQDK 143
Query: 1443 EDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRV 1502
+ ER RE AR+ ++ + E + + +K Q+ + A ERR
Sbjct: 144 ARREWERQKRREMAREHSRRERDRLEQLERKRERERKMREQQKEQREQKERERRAEERRK 203
Query: 1503 --QAVREI----HPFIDDYQYDTEESLWCQVTVKLP 1532
+A RE+ +DY + S W + + P
Sbjct: 204 EREARREVSAHHRTMREDYSDKVKASHWSRSPPRPP 239
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 52.4 bits (124), Expect = 4e-06
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 1384 GRSRGEQEG---DEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEN 1440
G R +QE D E +G + E EEG+ D D ++ +EEE D E +E+E+ EG+E+
Sbjct: 147 GYDREDQEAPDSDAEVDGVDEEEEDEEGE-DEEDEDDEDGEEEEFDEEDDEDEDVEGDED 205
Query: 1441 DDEDMQEERNPHREGARKTQEQDEE 1465
DDE +EE + + +++DEE
Sbjct: 206 DDEVSEEEEEFGLDEEDEDEDEDEE 230
Score = 52.0 bits (123), Expect = 5e-06
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 1389 EQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEE 1448
++EG++EE+ D E EE D + + + E E++ + EEEE EE++DED EE
Sbjct: 171 DEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEE 230
Query: 1449 RNPHREGARKTQEQDEE 1465
+G ++ +E D+E
Sbjct: 231 EEEGGKGEKRKRETDDE 247
Score = 51.6 bits (122), Expect = 6e-06
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 1402 DAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQE 1461
D EA + DA+ +E+ EE D E E++E+ E EE D+ED ++E E + E
Sbjct: 152 DQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSE 211
Query: 1462 QDEEVGLGTEED 1473
++EE GL E++
Sbjct: 212 EEEEFGLDEEDE 223
Score = 41.6 bits (96), Expect = 0.007
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 1374 QRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAE-EGDADASDAKRKEKQEEEVDYESEEE 1432
+ + D GE +++G+EEE D + + EGD D D +E++E +D E E+E
Sbjct: 167 EEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDED-DDEVSEEEEEFGLDEEDEDE 225
Query: 1433 EEREGEENDDEDMQEERNPHREG 1455
+E E EE + + +R EG
Sbjct: 226 DEDEEEEEGGKGEKRKRETDDEG 248
Score = 36.2 bits (82), Expect = 0.28
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Query: 1388 GEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREG---------- 1437
GE+E +EE+ D E +E D + S+ + + +EE + E E+EEE EG
Sbjct: 185 GEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRET 244
Query: 1438 --EENDD 1442
E DD
Sbjct: 245 DDEGEDD 251
Score = 32.7 bits (73), Expect = 3.1
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 1411 DASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEEVGLGT 1470
D D + +E + + + + +EEE + E D+ED +++ + E + ++DE+V G
Sbjct: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEED-EDDEDGEEEEFDEEDDEDEDVE-GD 203
Query: 1471 EED 1473
E+D
Sbjct: 204 EDD 206
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 52.4 bits (124), Expect = 4e-06
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 19/135 (14%)
Query: 1343 ETRFFKLLMESIKKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVD 1402
ET L E +++ A N + + DL E E+E +EEEE +
Sbjct: 1313 ETGEALLPQEENRREETCAPVSPNTSPGEKPEDDLIKPEE--EEEEEEEEEEEEEEE--E 1368
Query: 1403 AEAEEG----DADASDAKRKEKQEEEV-----------DYESEEEEEREGEENDDEDMQE 1447
E EEG + D AK +EK+E E+ D+E EEEE+ E N+D D +
Sbjct: 1369 GEEEEGGGNVEKDPDGAKSQEKEEPEISTEKEDSARLDDHEEEEEEDEEPSHNEDHDADD 1428
Query: 1448 ERNPHREGARKTQEQ 1462
E + H E A +E+
Sbjct: 1429 EDDSHMESAEVEKEE 1443
Score = 43.9 bits (102), Expect = 0.001
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 1396 EEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQ 1446
E G +++ E + + + +E++EEE + E EEEEE E EE ++E++Q
Sbjct: 1057 ERGQLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQ 1107
Score = 42.7 bits (99), Expect = 0.003
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 1389 EQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEE 1448
++E EE V G+ D + E++EEE E EEEEE E EE ++E+
Sbjct: 1321 QEENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEE---EEEEEEEEEEEEGEEEEGGGN 1377
Query: 1449 RNPHREGARKTQEQDEEVGLGTEEDPSL 1476
+GA+ ++++ E+ E+ L
Sbjct: 1378 VEKDPDGAKSQEKEEPEISTEKEDSARL 1405
Score = 40.8 bits (94), Expect = 0.011
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 1382 ELGRSRGEQEGDEEEEG------HIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEER 1435
E G + QE + EE + E E D + + +E++EEE + E EE EE
Sbjct: 1313 ETGEALLPQEENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEE 1372
Query: 1436 EGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQE 1491
EG N ++D ++ +E + E+++ L E+ + +P+H+++
Sbjct: 1373 EGGGNVEKDPDGAKSQEKEEPEISTEKEDSARLDDHEEEE-----EEDEEPSHNED 1423
Score = 38.9 bits (89), Expect = 0.044
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 1424 EVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQP 1483
E+ ES EEEE E +E ++E+ +EE E + +E++E E S P LT+P
Sbjct: 1063 ELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEE------ENIQSSPPRLTKP 1116
Query: 1484 R 1484
+
Sbjct: 1117 Q 1117
Score = 38.9 bits (89), Expect = 0.044
Identities = 16/57 (28%), Positives = 34/57 (59%)
Query: 1412 ASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEEVGL 1468
+ ++ +E++EE+ + E EEEEE E EE ++E+ +EE + + + + + V +
Sbjct: 1065 SKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVAI 1121
Score = 36.6 bits (83), Expect = 0.22
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 26/135 (19%)
Query: 1387 RGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQ 1446
R E+E E E + E + A + E+ D + EEE E EE ++E+ +
Sbjct: 1306 RIEEEVKETGEALLPQEENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEE 1365
Query: 1447 EERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVR 1506
EE + ++EE G E+DP SQE + PE + + R
Sbjct: 1366 EE-----------EGEEEEGGGNVEKDPD----------GAKSQEKEEPEISTEKEDSAR 1404
Query: 1507 EIHPFIDDYQYDTEE 1521
+DD++ + EE
Sbjct: 1405 -----LDDHEEEEEE 1414
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 52.4 bits (124), Expect = 4e-06
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1378 DNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREG 1437
++ E GE+ ++ +E D E EEGD + + +E ++++ D E E+EE E
Sbjct: 97 EDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEE 156
Query: 1438 EENDDEDMQEERNPHREGARKTQ-EQDEE 1465
EE ++E+ +EE H+ T+ QD E
Sbjct: 157 EEEEEEEEEEENEDHQMNCHNTRIMQDTE 185
Score = 51.2 bits (121), Expect = 8e-06
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 1372 ATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEE 1431
A + D + E S G ++ DE+EE E EE D + +++++EE D E EE
Sbjct: 79 AVKADSSSVDECDDSDGTEDMDEKEED-----EGEEYSEDNDEPGDEDEEDEEGDREEEE 133
Query: 1432 EEEREGEENDDEDMQEERNPHREGARKTQEQDEE 1465
E E E +E+DDED ++ + E + +E++EE
Sbjct: 134 EIEEE-DEDDDEDGEDVEDEEEEEEEEEEEEEEE 166
Score = 50.1 bits (118), Expect = 2e-05
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 1378 DNAGELGRSRGEQEGDEEEEGHIVDAEAEEG--DADASDAKRKEKQEEEVDYESEEEEER 1435
++ GE ++ GDE+EE D E EE + D D + E E+E + E EEEEE
Sbjct: 104 EDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEE 163
Query: 1436 EGEENDDEDMQEERNPHREGARKTQEQDE 1464
E EEN+D M N H + E+D+
Sbjct: 164 EEEENEDHQM----NCHNTRIMQDTEKDD 188
Score = 36.6 bits (83), Expect = 0.22
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 1383 LGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDD 1442
L + R Q+ +E A + D+ + D E++D + E+E E E+ND+
Sbjct: 57 LAKKRKTQDKQPQEPAPKRKPFAVKADSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDE 116
Query: 1443 EDMQEERNPHREGARKTQEQDEEVGLGTEED 1473
++E + EG R+ +E+ EE +ED
Sbjct: 117 PGDEDEED--EEGDREEEEEIEEEDEDDDED 145
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 52.0 bits (123), Expect = 5e-06
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 1355 KKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASD 1414
K ++ K R R +R+ E R R ++ ++E + E E G +D
Sbjct: 85 KDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTD 144
Query: 1415 AKRKEKQEEEVDYESEEEEEREGEENDDEDMQE------------ERNPHREGARKTQEQ 1462
+R+ +++ + + E E + +RE + + + Q+ ER RE KT+++
Sbjct: 145 GQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDR 204
Query: 1463 DEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVRE 1507
E G E + + R+ ++ Q ER QA RE
Sbjct: 205 HSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERE 249
Score = 48.5 bits (114), Expect = 6e-05
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 1355 KKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASD 1414
+K+ + R +R QR+ + E R R + E E + E + +
Sbjct: 285 RKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDR----EKE 340
Query: 1415 AKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEE 1465
+RK K++ E+D E + REG + + + ER R+ AR+ +E++ +
Sbjct: 341 RERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERD 391
Score = 48.1 bits (113), Expect = 7e-05
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 14/162 (8%)
Query: 1352 ESIKKKNNKASAFRNVNTRRATQRDLDNAGELGR-SRGEQEGDEEEEGHIVDAEAEEGDA 1410
E+ + K R + +R T+R+ + E R S E E D+E E E D
Sbjct: 217 ETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERE--------RERDR 268
Query: 1411 DASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQ-----EQDEE 1465
D +R++++E + D + + ER+ E + Q ER RE RK + E++ E
Sbjct: 269 DRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERE 328
Query: 1466 VGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVRE 1507
TE D + R+ +E E R QA RE
Sbjct: 329 RQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERE 370
Score = 47.4 bits (111), Expect = 1e-04
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 1352 ESIKKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDAD 1411
E +K+ + RN T R +R + E R R Q E EE E D D
Sbjct: 342 ERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREE--------RERDRD 393
Query: 1412 ASDAKRKEKQ-EEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEE 1465
K +E+Q E++ D + E E++RE E++ + + ER RE +K +E+D E
Sbjct: 394 RDRQKERERQTEKDRDGQRETEKQREREKDRESERGRERGRERE-KQKGRERDRE 447
Score = 43.5 bits (101), Expect = 0.002
Identities = 40/156 (25%), Positives = 61/156 (39%), Gaps = 23/156 (14%)
Query: 1355 KKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASD 1414
+++ K R + +R +R+ D + R R Q E+E D E +
Sbjct: 63 ERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERD-------- 114
Query: 1415 AKRKEKQEEEVDYESEEEEEREGEENDDE--DMQEERNPHREGARKTQEQ-DEEVGLGTE 1471
R+ ++E E E E EREGE D D Q ER R+ ++ + Q D E TE
Sbjct: 115 --RQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTE 172
Query: 1472 EDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVRE 1507
+ R+ +E E ER Q +E
Sbjct: 173 RN----------RQKEREREKNRQERRERERQREKE 198
Score = 43.1 bits (100), Expect = 0.002
Identities = 43/171 (25%), Positives = 66/171 (38%), Gaps = 19/171 (11%)
Query: 1352 ESIKKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAE----- 1406
E ++K + R R QR+ +N E R + G E E + E E
Sbjct: 172 ERNRQKEREREKNRQERRERERQREKENKTE---DRHSERGRERERERETETETERKRQT 228
Query: 1407 --EGDADASDAKRKEKQEEEV---DYESEEEEEREGEENDDED-----MQEERNPHREGA 1456
E D + +EKQ E + E+E ++ERE E + D D + ER R+
Sbjct: 229 DRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQ 288
Query: 1457 RKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVRE 1507
R+T E+D E E + RK +E + +R + RE
Sbjct: 289 RRT-ERDRETERKRERQRERERERERNRKRERERERERERERQRETERDRE 338
Score = 41.2 bits (95), Expect = 0.009
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 1352 ESIKKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDAD 1411
E +++N K R R QR+ + E R R + E + + + G
Sbjct: 308 ERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDR----ERNRQTGREG 363
Query: 1412 ASDAKRKEKQEEEVDYESEEEEEREGEEND-DEDMQEER----NPHREGARKTQEQDE 1464
A+R+ ++E E D +S E RE E D D D Q+ER R+G R+T++Q E
Sbjct: 364 RRQAERERERERERDRQSARE--REERERDRDRDRQKERERQTEKDRDGQRETEKQRE 419
Score = 40.4 bits (93), Expect = 0.015
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 13/108 (12%)
Query: 1370 RRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAE------EGDADASDAKRKEK--- 1420
RR ++ LG++ + +GD+ E + E E + D +R+EK
Sbjct: 29 RRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRH 88
Query: 1421 ----QEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDE 1464
+ E + E+E ER+ + D ++ERN +E R+T+ + E
Sbjct: 89 RKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGE 136
Score = 40.0 bits (92), Expect = 0.020
Identities = 39/173 (22%), Positives = 67/173 (38%), Gaps = 21/173 (12%)
Query: 1355 KKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEG------ 1408
K++ + R T R Q++ + + R E+E E+E D +E G
Sbjct: 157 KERERQTDRERQRQTERNRQKEREREKNR-QERRERERQREKENKTEDRHSERGRERERE 215
Query: 1409 -----------DADAS-DAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGA 1456
D D +RK ++E E E E ERE E + + + + +R+ R+
Sbjct: 216 RETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRR 275
Query: 1457 RKTQEQ--DEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVRE 1507
+K +E+ D + TE D + R+ +E ER + RE
Sbjct: 276 QKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERE 328
Score = 39.7 bits (91), Expect = 0.026
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 1365 RNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEE 1424
R T R QR + E R R Q E E E E + +R+ +++ E
Sbjct: 279 RERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERER------ERERERERQRE 332
Query: 1425 VDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDE 1464
+ + E+E ER+ + + D + R REG R+ + + E
Sbjct: 333 TERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERE 372
Score = 35.0 bits (79), Expect = 0.63
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 1409 DADASDAKRKEKQEE----EVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDE 1464
DAD D +R +Q+E ++E E +R+ E ++D +R+ HRE ++ +E++
Sbjct: 48 DADGDDRERN-RQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRE-RQRDREKER 105
Query: 1465 EVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVRE 1507
E E D + ++ E +G +R+ RE
Sbjct: 106 ERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRE 148
Score = 31.6 bits (70), Expect = 7.0
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 13/114 (11%)
Query: 1365 RNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEE 1424
R + +R + + D E R R + E E + E E + +R+ ++E E
Sbjct: 281 RQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERER------ERERERQRETE 334
Query: 1425 VDYESEEEEER------EGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEE 1472
D E E E +R + E N + R RE R+ +E+D + EE
Sbjct: 335 RDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERE-RERDRQSAREREE 387
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 51.2 bits (121), Expect = 8e-06
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 18/182 (9%)
Query: 1352 ESIKKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDAD 1411
E K+K + R+ + R +RD D E R R + + + E
Sbjct: 334 EREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSR---- 389
Query: 1412 ASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDE------E 1465
D +R+ ++E E + E E E ERE E + + + ER ++ R+ E+D E
Sbjct: 390 --DREREREREREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLE 447
Query: 1466 VGLGTEE---DPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVRE---IHPFIDDYQYDT 1519
L +E L + RK T E + ERR + +E + F++DY D
Sbjct: 448 RKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDR 507
Query: 1520 EE 1521
++
Sbjct: 508 DD 509
Score = 47.4 bits (111), Expect = 1e-04
Identities = 30/141 (21%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 1370 RRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYES 1429
R R++ + + E++G +E+E ++ E E + + + + ++E E + E
Sbjct: 274 RDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERERERER 333
Query: 1430 EEEEEREGEENDDEDMQEERNPHREGAR---KTQEQDEEVGLGTEEDPSLPALLTQPRKP 1486
E E+E+E E + D +R R+ R + +++D E +D S ++ R+
Sbjct: 334 EREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRER 393
Query: 1487 THSQEPQGPEAMERRVQAVRE 1507
+E + ER + RE
Sbjct: 394 ERERERERERERERERERERE 414
Score = 42.7 bits (99), Expect = 0.003
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 1309 QNKFQVYQLRFQFLPHAYYQQEKCLRPEDILRFM--ETRFFKLLMESIKKKNNKASAFR- 1365
Q + + +++R + Y ++ + R E+ R M E + K +E + +R
Sbjct: 458 QERLKNWEIRERKKTREYEKEAE--REEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRG 515
Query: 1366 NVNTRRATQRDLD-NAGELGRSRGEQEGDEEE-----EGHI-VDAEAEEGDADASDAKRK 1418
+ +R R+ + A E R R ++E +E EGH DAE + + +A + +R+
Sbjct: 516 SALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEA-ERRRQ 574
Query: 1419 EKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARK 1458
+ ++E + E EEEE++E EE +E M+EE P ++ K
Sbjct: 575 PQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPEQKPCLK 614
Score = 38.5 bits (88), Expect = 0.057
Identities = 50/249 (20%), Positives = 92/249 (36%), Gaps = 22/249 (8%)
Query: 1271 TKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFCMEEKQNKFQVYQLRFQFLPHAYY--- 1327
TK+ + +K + L R E+ +S ++K+ K + RF P Y
Sbjct: 200 TKRRDQMIKGAIEVLIREYSSELNAPSQESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLI 259
Query: 1328 -----------QQEKCLRPEDILRFMETRFFKLLMESIKKKNNKASAFRNVNTRRATQRD 1376
+ ++ L +I +F +T K L E KK + RR +R+
Sbjct: 260 TKEDINAIEMEEDKRDLISREISKFRDTH--KKLEEEKGKKEKERQEIEK--ERRERERE 315
Query: 1377 LDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEK---QEEEVDYESEEEE 1433
+ E E+E + E E E D D K +++ +E + D + E
Sbjct: 316 RERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSS 375
Query: 1434 EREGEENDDEDMQEERNPHREGAR-KTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEP 1492
+R + + + +R RE R + +E++ E E + + + +E
Sbjct: 376 DRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDREE 435
Query: 1493 QGPEAMERR 1501
+A ERR
Sbjct: 436 DEEDAYERR 444
Score = 31.6 bits (70), Expect = 7.0
Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 1378 DNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREG 1437
D E+ +++ ++EE I EG D ++ +QE E + + ++E E
Sbjct: 524 DREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPES 583
Query: 1438 EENDDEDMQEERNPHREGARKTQEQDEE 1465
EE ++E+ QE+ E + +E +++
Sbjct: 584 EE-EEEEKQEKEEKREEPMEEEEEPEQK 610
Score = 31.6 bits (70), Expect = 7.0
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 22/101 (21%)
Query: 1406 EEGDADASDAKRKEKQEEEVDY-----------------ESEEEEEREGEENDDEDMQEE 1448
+E +AD D KR++++ EE+ E E E R+ + + + +EE
Sbjct: 527 KEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEE 586
Query: 1449 RNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHS 1489
+E K +E EE EE+P L +P S
Sbjct: 587 EEEKQEKEEKREEPMEE-----EEEPEQKPCLKPTLRPISS 622
>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member A [Homo sapiens]
Length = 249
Score = 50.8 bits (120), Expect = 1e-05
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 1389 EQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEE--REGEENDDEDMQ 1446
++E DE+EE + DA+ E + D + +E +EE+V E EE+EE +GE +D+ED +
Sbjct: 169 DEEEDEDEEEYDEDAQVVEDEEDEDE--EEEGEEEDVSGEEEEDEEGYNDGEVDDEEDEE 226
Query: 1447 EERNPHREGARKTQEQDE 1464
E R RK + +DE
Sbjct: 227 ELGEEERGQKRKREPEDE 244
Score = 46.6 bits (109), Expect = 2e-04
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 1384 GRSRGEQEG-DEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDD 1442
G R ++E D + EG++ + EE D D +E+ +E+ +EE+E E EE ++
Sbjct: 147 GYDRDDKEAPDSDAEGYVEGLDDEEEDED------EEEYDEDAQVVEDEEDEDEEEEGEE 200
Query: 1443 EDMQEERNPHREGAR--KTQEQDEEVGLGTEE 1472
ED+ E EG + ++++E LG EE
Sbjct: 201 EDVSGEEEEDEEGYNDGEVDDEEDEEELGEEE 232
Score = 32.0 bits (71), Expect = 5.3
Identities = 17/70 (24%), Positives = 35/70 (50%)
Query: 1404 EAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQD 1463
+ E D+DA EEE + E E +E+ + E+++++ +EE + + + +E +
Sbjct: 152 DKEAPDSDAEGYVEGLDDEEEDEDEEEYDEDAQVVEDEEDEDEEEEGEEEDVSGEEEEDE 211
Query: 1464 EEVGLGTEED 1473
E G +D
Sbjct: 212 EGYNDGEVDD 221
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 50.8 bits (120), Expect = 1e-05
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 1386 SRGEQEGDEE--EEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDE 1443
+ E+EG EE EE V+ +AEE + D + +E++EEE E EEEEE E E D+
Sbjct: 198 TENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEE--EEEEEEEEEEYEQDER 255
Query: 1444 DMQEERNPHREGARKTQEQDEEV 1466
D +EE N + + + E V
Sbjct: 256 DQKEEGNDYDTRSEASDSGSESV 278
Score = 50.4 bits (119), Expect = 1e-05
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 12/159 (7%)
Query: 1327 YQQEKCLRPEDILRFMETRFFKLLM----ESIKKKNNKASAFRNVNTRRATQRDLDNAGE 1382
Y+ E+ R E R R +L E K + K + RRA D +
Sbjct: 95 YKNEEYQRSERNKRLDADRKIRLSSSASREPYKNQPEKTCVRKRDPERRAKSPTPDGSER 154
Query: 1383 LG------RSRGEQEGDEEEEGHIVDAEAEEGDADASDAK--RKEKQEEEVDYESEEEEE 1434
+G SR Q EE ++ E G + +SD + E +EE V+ + EE+EE
Sbjct: 155 IGLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEE 214
Query: 1435 REGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEED 1473
E + +DE++ E+ E + +E++EE E+D
Sbjct: 215 VEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQD 253
Score = 48.1 bits (113), Expect = 7e-05
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 1386 SRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDED- 1444
S EQ + E E V+ + EE + DA+ E+ +E+ + E EEEEE E EE ++E+
Sbjct: 190 SSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEE 249
Query: 1445 -MQEERNPHREG 1455
Q+ER+ EG
Sbjct: 250 YEQDERDQKEEG 261
Score = 38.1 bits (87), Expect = 0.074
Identities = 25/114 (21%), Positives = 44/114 (38%)
Query: 1409 DADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEEVGL 1468
+ D ++ + +EEV+ E + G ++ EG + E+DEEV
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE 217
Query: 1469 GTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVREIHPFIDDYQYDTEES 1522
EED + + + +E + E E Q R+ +DY +E S
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEAS 271
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 50.8 bits (120), Expect = 1e-05
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 1386 SRGEQEGDEE--EEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDE 1443
+ E+EG EE EE V+ +AEE + D + +E++EEE E EEEEE E E D+
Sbjct: 198 TENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEE--EEEEEEEEEEYEQDER 255
Query: 1444 DMQEERNPHREGARKTQEQDEEV 1466
D +EE N + + + E V
Sbjct: 256 DQKEEGNDYDTRSEASDSGSESV 278
Score = 50.4 bits (119), Expect = 1e-05
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 12/159 (7%)
Query: 1327 YQQEKCLRPEDILRFMETRFFKLLM----ESIKKKNNKASAFRNVNTRRATQRDLDNAGE 1382
Y+ E+ R E R R +L E K + K + RRA D +
Sbjct: 95 YKNEEYQRSERNKRLDADRKIRLSSSASREPYKNQPEKTCVRKRDPERRAKSPTPDGSER 154
Query: 1383 LG------RSRGEQEGDEEEEGHIVDAEAEEGDADASDAK--RKEKQEEEVDYESEEEEE 1434
+G SR Q EE ++ E G + +SD + E +EE V+ + EE+EE
Sbjct: 155 IGLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEE 214
Query: 1435 REGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEED 1473
E + +DE++ E+ E + +E++EE E+D
Sbjct: 215 VEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQD 253
Score = 48.1 bits (113), Expect = 7e-05
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 1386 SRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDED- 1444
S EQ + E E V+ + EE + DA+ E+ +E+ + E EEEEE E EE ++E+
Sbjct: 190 SSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEE 249
Query: 1445 -MQEERNPHREG 1455
Q+ER+ EG
Sbjct: 250 YEQDERDQKEEG 261
Score = 38.1 bits (87), Expect = 0.074
Identities = 25/114 (21%), Positives = 44/114 (38%)
Query: 1409 DADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEEVGL 1468
+ D ++ + +EEV+ E + G ++ EG + E+DEEV
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE 217
Query: 1469 GTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVREIHPFIDDYQYDTEES 1522
EED + + + +E + E E Q R+ +DY +E S
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEAS 271
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 50.4 bits (119), Expect = 1e-05
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 1388 GEQEGDEEEEGHIV---DAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDED 1444
GE G EE E + + E+E G+ S+ + + ++E E + ESE+E + E EE+ +E+
Sbjct: 73 GEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEE 132
Query: 1445 MQEERNPHREGARKTQEQDEEVGLGTEEDPS 1475
M++E+ E QE+ E G E S
Sbjct: 133 MEDEQ--ESEAEEDNQEEGESEAEGETEAES 161
Score = 46.6 bits (109), Expect = 2e-04
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 1382 ELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEND 1441
E+ GE+ EEE ++E EE D SD + +E EEE++ E E E E + +E
Sbjct: 90 EIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQEEG 149
Query: 1442 DEDMQEERNPHREGARKTQEQDEEV 1466
+ + + E E + + + E V
Sbjct: 150 ESEAEGETEAESEFDPEIEMEAERV 174
Score = 45.4 bits (106), Expect = 5e-04
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 1374 QRDLDN-AGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEE 1432
+R++++ AGE S E E +EE E + E+E+ + S+ +E+ E+E + E+EE+
Sbjct: 88 EREIESEAGEESESEEESESEEESE---TEEESEDESDEESEEDSEEEMEDEQESEAEED 144
Query: 1433 EEREGE---ENDDE-----DMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALL 1480
+ EGE E + E D + E R RK + ++ +ED L +L
Sbjct: 145 NQEEGESEAEGETEAESEFDPEIEMEAERVAKRKCPDHGLDLSTYCQEDRQLICVL 200
Score = 42.0 bits (97), Expect = 0.005
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 1384 GRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDE 1443
G+ E + ++E E E E + ++ + E +EE D EE EE EE +DE
Sbjct: 77 GKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDE 136
Query: 1444 DMQEERNPHREGARKTQEQDEEVGLGTEEDPSL 1476
E ++E E + E +E DP +
Sbjct: 137 QESEAEEDNQEEGESEAEGETEA--ESEFDPEI 167
Score = 35.4 bits (80), Expect = 0.48
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 19/113 (16%)
Query: 1405 AEEGDADASDAKRKEKQEEEVDYE----SEEEEEREGEENDDEDMQEERNPHREGARKTQ 1460
A+ A +A+ K +QE E++ E SE EEE E EE + + + E
Sbjct: 71 ADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESE-----------D 119
Query: 1461 EQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVREIHPFID 1513
E DEE +EED Q + + +G E +A E P I+
Sbjct: 120 ESDEE----SEEDSEEEMEDEQESEAEEDNQEEGESEAEGETEAESEFDPEIE 168
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 50.4 bits (119), Expect = 1e-05
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 1402 DAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQE 1461
DA +EE +E+ EEE + E EEEE+ E EE ++E+ +EE E + +E
Sbjct: 242 DAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEE---EEEE 298
Query: 1462 QDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPE 1496
++EE EE+ + P ++ Q +H+ + PE
Sbjct: 299 EEEE-----EEEEAAPDVIFQ-EDTSHTSAQKAPE 327
Score = 50.4 bits (119), Expect = 1e-05
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 1406 EEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEE 1465
EE D + + + +E+++EE + E EEEEE E EE ++E+ +EE E A Q++
Sbjct: 258 EEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDT 317
Query: 1466 VGLGTEEDPSLPALLTQPRKPTHS 1489
++ P L + KP +S
Sbjct: 318 SHTSAQKAPELRGPESPSPKPEYS 341
Score = 48.1 bits (113), Expect = 7e-05
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 13/137 (9%)
Query: 1372 ATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEE 1431
A++ G L ++E +EEEE D E EE + + + + +E++EEE + E EE
Sbjct: 244 ASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 303
Query: 1432 EEEREGE---ENDDEDMQEERNPHREGARKTQEQDE-----EVGLGTEEDPSLPALLTQP 1483
EEE + + D ++ P G + E EV ++D T
Sbjct: 304 EEEAAPDVIFQEDTSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDED-----THS 358
Query: 1484 RKPTHSQEPQGPEAMER 1500
RK T + E + + M R
Sbjct: 359 RKSTVTDESEMQDMMTR 375
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,067,432
Number of Sequences: 37866
Number of extensions: 3204469
Number of successful extensions: 33400
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 545
Number of HSP's that attempted gapping in prelim test: 14788
Number of HSP's gapped (non-prelim): 8028
length of query: 1720
length of database: 18,247,518
effective HSP length: 116
effective length of query: 1604
effective length of database: 13,855,062
effective search space: 22223519448
effective search space used: 22223519448
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.