AICDA 68

Name: AICDA	Sequence: fasta or formatted (198aa)		NCBI GI: 10190700
Description: activation-induced cytidine deaminase		Referenced in: B cells RNA Editing and Other RNA Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 10 1 C cysteine 3.5 7 1 D aspartate 6.6 13 2 E glutamate 5.1 10 1 F phenylalanine 7.1 14 1 G glycine 4.5 9 1 H histidine 2.5 5 1 I isoleucine 2.5 5 1 K lysine 4.0 8 1 L leucine 12.6 25 2 M methionine 1.5 3 1 N asparagine 4.5 9 1 P proline 2.5 5 1 Q glutamine 1.5 3 1 R arginine 13.1 26 2 S serine 5.1 10 1 T threonine 4.5 9 1 V valine 5.1 10 2 W tryptophan 3.0 6 1 Y tyrosine 5.6 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 activation-induced cytidine deaminase APOBEC3G 0.317 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3C 0.300 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3F 0.300 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3B 0.287 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3A 0.285 phorbolin 1 APOBEC3D 0.270 apolipoprotein B mRNA editing enzyme, catalytic pol... APOBEC3H 0.212 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC2 0.204 apolipoprotein B mRNA editing enzyme, catalytic polyp... APOBEC1 0.154 apolipoprotein B mRNA editing enzyme ARHGAP18 0.010 Rho GTPase activating protein 18 TMEM66 0.008 transmembrane protein 66 PAPOLB 0.008 poly(A) polymerase beta (testis specific) EIF3CL 0.008 eukaryotic translation initiation factor 3, subunit... MFI2 0.008 melanoma-associated antigen p97 isoform 1 precursor... EIF3C 0.008 eukaryotic translation initiation factor 3, subunit ... EIF3C 0.008 eukaryotic translation initiation factor 3, subunit C... RND3 0.005 ras homolog gene family, member E TMEM2 0.005 transmembrane protein 2 isoform b TMEM2 0.005 transmembrane protein 2 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.