APOBEC3A 13852

Name: APOBEC3A	Sequence: fasta or formatted (199aa)		NCBI GI: 21955158
Description: phorbolin 1		Referenced in: Additional Host Defense Functions RNA Editing and Other RNA Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 14 2 C cysteine 3.0 6 1 D aspartate 6.5 13 1 E glutamate 4.5 9 1 F phenylalanine 6.0 12 1 G glycine 7.0 14 1 H histidine 5.0 10 1 I isoleucine 4.0 8 1 K lysine 2.5 5 1 L leucine 10.1 20 2 M methionine 2.5 5 1 N asparagine 4.5 9 2 P proline 4.5 9 1 Q glutamine 6.0 12 1 R arginine 7.0 14 1 S serine 5.5 11 1 T threonine 3.5 7 1 V valine 4.0 8 1 W tryptophan 2.5 5 1 Y tyrosine 4.0 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 phorbolin 1 APOBEC3B 0.826 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3G 0.548 apolipoprotein B mRNA editing enzyme, catalytic poly... AICDA 0.280 activation-induced cytidine deaminase APOBEC3F 0.241 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3D 0.236 apolipoprotein B mRNA editing enzyme, catalytic pol... APOBEC3C 0.231 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3H 0.179 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC2 0.159 apolipoprotein B mRNA editing enzyme, catalytic polyp... APOBEC1 0.114 apolipoprotein B mRNA editing enzyme PTCD3 0.007 pentatricopeptide repeat domain 3 C13orf18 0.007 hypothetical protein LOC80183 DNAH14 0.005 dynein, axonemal, heavy polypeptide 14 isoform 1 [H... LOC644070 0.005 PREDICTED: germ cell-specific gene 1-like protein 2... LOC644070 0.005 PREDICTED: germ cell-specific gene 1-like protein 2... LOC644070 0.005 PREDICTED: germ cell-specific gene 1-like protein 2... RRM1 0.005 ribonucleoside-diphosphate reductase M1 chain Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.