APOBEC3D 10049

Name: APOBEC3D	Sequence: fasta or formatted (386aa)		NCBI GI: 187608816
Description: apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D		Referenced in: Additional Host Defense Functions RNA Editing and Other RNA Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 18 2 C cysteine 4.4 17 1 D aspartate 4.4 17 2 E glutamate 6.5 25 1 F phenylalanine 7.5 29 1 G glycine 3.6 14 1 H histidine 3.1 12 2 I isoleucine 3.1 12 1 K lysine 4.9 19 1 L leucine 8.3 32 2 M methionine 2.6 10 1 N asparagine 6.2 24 1 P proline 4.9 19 1 Q glutamine 2.6 10 1 R arginine 8.3 32 2 S serine 4.9 19 1 T threonine 4.7 18 1 V valine 5.7 22 2 W tryptophan 4.1 16 1 Y tyrosine 5.4 21 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apolipoprotein B mRNA editing enzyme, catalytic pol... APOBEC3F 0.734 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3B 0.509 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3C 0.348 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3G 0.309 apolipoprotein B mRNA editing enzyme, catalytic poly... AICDA 0.130 activation-induced cytidine deaminase APOBEC3A 0.115 phorbolin 1 APOBEC2 0.098 apolipoprotein B mRNA editing enzyme, catalytic polyp... APOBEC3H 0.098 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC1 0.072 apolipoprotein B mRNA editing enzyme APOBEC3F 0.049 apolipoprotein B mRNA editing enzyme, catalytic poly... BRCA2 0.006 breast cancer 2, early onset F5 0.005 coagulation factor V precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.